Botrytis virus F (isolate Botrytis cinerea/New Zealand/Howitt/2001) (BotV-F)
Average proteome isoelectric point is 7.91
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC_method)
Get csv file with sequences according given criteria:
* You can choose from 18 different methods for calculating isoelectric point
Protein with the lowest isoelectric point: >sp|Q9DRA1|RDRP_BOTVF RNA replication protein
MAVPLERAFASVTQSFHKDATQGPTTNEYLVARAETQRYAPYAVRKGPAALLAQVGINTIHDSPLSHSHPACYALNAFHFLKVIPRYLHGKAEVWGTKDNWFRKLQAQIDSQTTTLTHRNYAITARDHVRYPGTVVDHPGSCTAGTLFMHDALQYMTPLDVYTLFATSPEMHSLVATAVIPPESVDRLPA FWPELYQLAYYEDHLCYAPDGNFADAYNQPLAAHQWMTMKSLHGPDFTLSVDVPASRYSHHIFVISKRPGLPDTHRDFMCPDLVELPKDFFPGANKADKLLPRTLVNQMVEYAASVKRATIKDATSRTRAYVKDQKYAAVTPVQQMYLSWFGSGLSQMQFPDRPVTPLDNFATALWYRLLPSRLYRLPAT IRNFQLKAFVDQLRTPQYLLHFKLDEYHLSSNDKYSDFYRNESRQASSKDMLSAFEAICFGGAPELEKKILGNNNPAPFATVPNPPSQTALGLATITAAIAFILPNRAARLTRLVARYAIRAVKEIVNPSFLTIPRFGLLSHSIASWLQTDGAVITYGLAPKIASWSAPIWYNAALLAPTDMRSCQVLVD IANDLRFDYRYGTMRLAVTLGLTLLNPFLRRLVLLPFKVLWHSYLPSIKNKLDSMVLMSISTLPDNISVPLLTLRGNLNRQRCPDNKDPTPIHESDDNSTADDKCLHCPIHCLKSKLSEPAASPDTVPEDNPLQEGDLTEEVYAAALAKKDTPPPYPTRNDCLLVALADGLLTKRILWFSCIKMFGNTAC WVIHDTGKAFDWMHLKMLAEQLKLNVSIEVAAEHDHHWTGLAKRVGPIDGRKIALRWYPYHWELSDRGREDYGPPPPPPPPSTTEPPPPPNPPAASPYHSPTVEDEPLEEIPLANSNGEFSTFAFDDMAADDLNPAQPLSSLDLDEEPSAKQEPLEPAAIKTSEPEPLVPESEEVFFRPSPTPTPSDATP TPAARAPSSVSNENAQRPRHPLPPVPTGGASAPSNDKLNSAAKQYARLVAGKTRQMTVAQPRSKAYLRDLKRGNIGTIPTAEAEQLDAYIDSWAVNGFNRSVHVIYFCGLPGTGKSRRCMKMTERLLKENKYLAQTVRIVTPTDNLRNSVARQLKPPTESSYSVQTYETPIRQPSLGPVLIVDEYGKMPA GWLETVLFLNPRVQMVIFTADPTQGIFRTRIPDAYCCRIPSSTEAIASYAHEYRRVSDRPAPGVARALGLPTTSRRPGQIETSTELNVDWITVRPEGERAAWHNTWGGKVYTYATCQGETFHRAYQMVINGNTRFWDDRDLFAALTRGSGTLRLIYETQSSKPLPRSTSKLYNALLDFRTDPHKLPLAIE EHVNRYIPSHLRNVNQAVPRRNAASNPDALPSQRILPGGQSTTAEPXQSQASALPTGGEAIDVPALDRQDPQRFPQLKVLPHLCGYIGDYSEASYPEPEHPKTQMLDATFPTYLARNRGWNDPALTDAVTANYKAPEHRDIWVEAVGETTRQVHGSGDDRDVFLEHRGDDKATANITYAKRLRFSQRAAN ERSIAATKVAGSELFEAFTRAIPLPQETFNDSLLEECRTENDTVHLTSKPLATLINNAERSDPSWSLNMIKLFIKGQTVKKLEKMGSDATAGQSIASFRAEVLLAWGPYARYIDRRIRALLPPHVYIHSRRTNEDFEKFVAAHWDHTRESTDGDYTAYDASQDATFVNFETLLMRRLDFPLDIIEAYVEM KASITSHFGPLAIMRFSGEVWTYLFNTLGNIAFTYAKYEVPSVAQVYGGDDKSINSPITVRTGWSQLVGKFNLVEKPVVGYEPTFCGWRIVPGGIVKDPQLLFWRTRYARIRYDAALWAPGYYDELVLSLKTSDRLMDHMSPNDLAYLQALVRFYTKLSRRLPSLADRRRCNPLPADSPSVVLSRD
Molecular weight: 212.27 kDa
Isoelectric point according different methods: Bjellqvist 7.454 DTASelect 7.629 Dawson 7.322 EMBOSS 7.673 Grimsley 7.029 IPC_peptide 7.351
IPC_protein 6.810 Lehninger 7.351 Nozaki 7.688 Patrickios 4.228 ProMoST 7.263 Rodwell 7.337
Sillero 7.775 Solomon 7.337 Thurlkill 7.673 Toseland 6.883 Wikipedia 7.293 Avg_pI 7.367 Protein with the highest isoelectric point: >sp|Q9DRA0|CAPSD_BOTVF Capsid protein
MTTSRFATFDIESETGLTPGAYPAPLPTLEQQLHDRNAILAAIPSLARAKLDAATLKRRFANFLLTLGMVGTTSKGSYEELIIPPVKGMGSSTGFRARELVQIITSSPAPPGFDGNQTLRQFARPYAPQVQNMIAQGKFKTNLYDKYGKSVGAPPHVCIDFNDAMDLQMFHSTAEFESAHKVRELAIAEA SARENAPRPAANPRAAKPIIGQTAPAFHSGDAAKQSGGQPVNIKPSLAQSAGFDSHRPPPETPPRAGTPSSQKSGQSGQTTIQPPASHGILSGMLGSHKSTPHSSPQQTPKK
Molecular weight: 32.08 kDa
Isoelectric point according different methods: Bjellqvist 9.706 DTASelect 9.706 Dawson 10.087 EMBOSS 10.306 Grimsley 10.131 IPC_peptide 10.116
IPC_protein 9.004 Lehninger 10.087 Nozaki 9.897 Patrickios 10.218 ProMoST 9.575 Rodwell 10.570
Sillero 9.984 Solomon 10.116 Thurlkill 9.940 Toseland 9.911 Wikipedia 10.218 Avg_pI 9.960
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
2
0
2
2,198
302
1,896
1099.0
122.2 kDa
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
10.19
1.05
5.64
4.69
3.73
5.0
2.73
4.23
4.23
9.33
1.82
3.82
3.73
8.92
6.51
7.01
7.1
5.05
1.46
3.73
Note: For statistics only major isoforms were used (in this case 2 proteins)
For dipeptide frequency statistics click
here