Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936) (Fusarium vascular wilt of tomato)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium oxysporum species complex; Fusarium oxysporum; Fusarium oxysporum f. sp. lycopersici

Average proteome isoelectric point is 6.55

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All


Virtual 2D-PAGE plot for 31,172 proteins (isoelectric point calculated using IPC_method)

Get csv file with sequences according given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 18 different methods for calculating isoelectric point
Protein with the lowest isoelectric point:
>tr|A0A0J9V7V1|A0A0J9V7V1_FUSO4 Isoform of A0A0J9V6T2 Uncharacterized protein
MQIQSIYLQNALASTATLDVTTTVLSTMNVTDAATGTITMTDTVLETNTVNTTAVVTSTEVDLVAVTSTATVNATETEFATVNSTVMFTSTETDLATATATTTATVNSTALFTITETEEVTSTETETVNNTALFTTTEIDVETSTETATVNSTVLFTSTETDFTTSTDATTATAVVFVTNSTTVTQTSTV
NATETAFETDTVFTTATVNTTATVNTTATTVETNTAFVTSTVDTTATVNTTATDFVTATVNTTATAFETDTAFTTATVNTTATDFVTATVNTTATAFETDTAFTTSTVNTTETVRTTSVVFATATINSTSTEFVTSTVNTTATAFETDTAFTTATVNTTATAFETDTAFTTATVNTTATVNTTATAFQTD
TVFTTATVNATDTSTATVTTTQTVFVTATETPTDVTSTETNTETQTVDATSVVTDTVNSTSTVVVTATVTSTVDTPASSASATPTSDPVTSPSPVSSDPVNASGAASTTTVVVATTDTTSAAGTPVASVSTSSAAASSPPASSADDGSAPSSLAAPATSSPAATSSPAAVSSDPTSEATGAASGAATTTT
TVVAPVDTTTAASDPVASDPTSSPALASSDPTSAATGAPTGAATTTVTTSATTTPIAENPTSAVGPSSAAVSSAETTETTTATGAATGAPTVATTTVTTSATATPVAEDPTSAADPSSAAVTSAEPSTEPTATATGAATTSSAVDGAPVDDTPPPSADSTDSATSTEEPTASAT
Molecular weight: 73.17 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0J9WTB8|A0A0J9WTB8_FUSO4 Uncharacterized protein
MVAAAVSGSSVLGTTGHLGVGRVGIGRVGIGRVGIGRVGIGRVGIGRVGIGRVGIGRVGIGRVGIGRVGIGRVGIGRVGIGRVGIGRVGIGRVGIGRVGIGRVGIGRVAGASAAAVLAVHSSFTRRRLAAGLKKNMHHPAD
Molecular weight: 13.73 kDa
Isoelectric point according different methods:





General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

20,850

10,322

31,172

8,696,990

13

7,531

417.1

46.4 kDa
Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

8.23

1.4

5.78

6.14

3.8

6.69

2.44

5.16

4.96

8.93

2.25

3.78

4.05

5.82

5.98

8.12

5.98

6.07

1.58

2.82
Note: For statistics only major isoforms were used (in this case 20,850 proteins)
For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI: proteome isoelectric point database. Nucleic Acids Res. 2016. doi: 10.1093/nar/gkw978       Contact: Lukasz P. Kozlowski