Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087)

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas; Pseudoalteromonas atlantica

Average proteome isoelectric point is 6.1

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All


Virtual 2D-PAGE plot for 4,271 proteins (isoelectric point calculated using IPC_method)

Get csv file with sequences according given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 18 different methods for calculating isoelectric point
Protein with the lowest isoelectric point:
>tr|Q15SG7|Q15SG7_PSEA6 Uncharacterized protein
MADIEYIVERIDGDDSITVIDEKGDIRFVSEGEIVSIGDTILSFDGGQVVLRANGQSIVLDNSIDVFIGTDLAPEQNIQSDEESQIDIDEDFLALLDGDGDLLDSLESTAAGSDSGGESGDGSTFVRVDRISEEIDPIEFEYNQAVIETTELDTQGVLAADFDIEFDLPDEINDATPTFTGTTSAPEGTL
VQVVVTDQNGNAQNLTSVVQDDGTFTVNVDGTLSEGTFTVDASITDDQGNTTTVSVNSAVDVTPPIIDNIAISDDSNTPTVSGQTDTLPGTQVTITVTDANGNIEVINAIVQDNGSFNGTLVTPLTEGDFAVVTEVTDSAGNTTSVTSTGNVDTAAPSVTDTTNPSSNSDTPLLTGTSNAEPGSEVIITV
TDANGDSQVINAVVQEDGTYSGSPANALAEGEFTLVTQITDQAGNTTSVTSTGSVDTTAPSVTDTTNPSSNSDTPLLTGTSNAEPGSEVTITVTDANGDSQVINAVVQADGTYSGSPANALAEGEFTLVTQITDQAGNTTSVTSTGSVDTTAPSVTDTTNPSSNSDTPLLTGTSNAEPGSEVTITVTDAN
GDSQVINAVVQEDGTYSGSPANALAEGEFTLVTQITDQAGNTTSVTSTGNIDTTAPVLTVDAPDNSNDATPTLTGTTDVPASSIVELTVTGSDGAVQILSATVQANGTYSVDVPNDLAEGDYTVAASVADATGNEANANDTGNIDTTAPVLTVDAPDNSNDATPTITGTTDVPANLVVNLTVTGSDGAVQ
ILSATVQASGTYSVDVPNDLAEGDYTVAATVADAAGNEANANDTGNIDTTAPVLTVDAPDISNDNTPIISGTTDTPLGTEVKIEVTDSNGATQSLIALVQVDGSFSVEIDTPLADGAFTLNVSVEDDAGNTTNVTASGEVNSALPNLSVNELPSGNDGTPIISGTTDAPVGSSVNITITDSNGVIQTLNT
SVQVDGSYSVEVPVILEDGTYNVSVTVDDGLGNQAQVSATGTIDTTAPTLTVDAPENSNDVTPTITGTTDAPPNSVVELTVTGSDGTVQTLSATVQANGTYSVDVLNDLAEGDYTVAATVTDAAGNEANANDTGNIDTTAPIVTVDVPANSNDATPTITGTTDVPANSVVNLSVTGNDGAVQTLSATVQA
NGTYSVDVPNDLAEGDYTVAATVADAAGNEANANDTGNIDTTAPVLTVDAPDNSNDATPTITGTTNAPQNATVSILITDANGVVQTLSATVQANGTYSVNVPNALSEGDFTVEASITDAAGNDASANDSGNVDTLYPNLILDAPDNSADTTPIISGSTNAPEGSSVQITVTDSAGNVQVVDTLVLNDGSF
TIEVSGVLAEGVFSVEANVSDQAGNQASITDTGSVDTVAPTLTVDAPYNSSDATPTIAGNTNAPVGSTVTITVTGSDTVVQTLTATVQPDGSFHVDVPSDLAEGAYTVDVTVADAAGNSTTESDTGSVDTVAPTLTVDAPDNSNDATPTITGITNAPQNTTVSILITDANGVEQTVSAAVLANGTYSVDV
PSDLADGAYMAEASITDAAGNPATASDTGSVDTVAPTLTVDAPDNSDDATPTITGTTNAPENATVSITVTGSNNVVQTLSAPVQANGTYSVDVPSDLAEGVYTVEATITDTAGNSTTETDTGSVDTVAPTITVDAPDNSSDATPTIAGNTDAPVGSTVTITVTGSDTVVQTLTATVQHDGSFHVDVPSDL
AEGAYTVDVTVADAAGNSTTQTDTGSVDTVAPTLTVDAPDNSNDATPTITGTTNAPENATVSILITDANGVEQTLSATVQANGTYSVDVPSDLADGAYMAEASITDTAGNSTTESDTGSVDTVAPTLTVDAPDNSNDATPTITGNTNEPVNSTVNITVTGSDNVVQTISATVQANGSYSVDVPSDLAEGA
YTVEATITDTAGNSTTETDTGSVDTVAPTITVDAPDNSNDATPTIAGNTNAPVGSTVTITVTGSDTVVQTLTATVQPDGSFYVDVPSDLAEGAYTVDVTVADEAGNSTTQTDTGSVDTVAPTLTVDAPDNSNDATPTITGTTNAPVNSTVSILITGANGVEQTVSATVLANGTYSVDVPSDLAEGTYTVT
AAISDSAGNEISVSQAGSVDTFPPTLIINAPDNTNDTTPTINGSTDANPGLNVSITVTDSNNISQTFNATVQPDGHFSADVPGVMADGNFTVSATVVDAATNSTTAVDSGSIDSTIPSLTLSLPANTNDDTPTLNGTTDASLDGSTVLITVTDSQGATQNLSTVVQSNGSFSIDVPGVLADGNYSVTATV
DDGNGNVASATDSGNIDTIDPTLSLIIPSGADDTTPLISGSTNVAPGSTVTITVTDSQGAVQNLSATVLANGSYSVEVPVELGQGAYSVSATATDAAGNSTTQTDTGSVDTVAPTLTVDAPDNSNDATPTITGTTNAPENATVSILITDANGVEQTLSATVQANGTYSVDVPSDLADGAYMAEASITDTA
GNSTTESDTGSVDTVAPTLTVDAPDNSNDATPTITGNTNEPVNSTVNITVTGSDNVVQTISATVQANGSYSVDVPSDLAEGAYTVEATITDTAGNSTTETDTGSVDTVAPTITVDAPDNSSDATPTIAGNTDAPVGSTVTITVTGSDTVVQTLTATVQPDGSFYVDVPSDLAEGAYTVDVTVADEAGNST
TQTDTGSVDTVAPTLTVDAPDNSNDATPTITGMTNAPENTTVNITVTGSNNVVQTLSATVQANGTYSVDVPSDLADGAYTAEASITDAAGNPATASDTGSVDTQAPTLTVDAPDNSDDATPTITGNTNAPENATVSITVTGSDNVVQTLSATVQANGTYSVDVPNDLAEGAYTAEATITDTAGNSTTESD
TGSVDTVAPTLTVGAPDNSSDATPTIAGNTNAPVGSTVTITVTSSDTVVQNLTATVQPDGSFHVDVPSDLAEGAYTVDVTVADAAGNSTTQTDTGSVDTVAPTLTVDAPDNSSDATPTITGTTNAPENATVSILITGANGVEQTVSATVLANGTYSVDVPSDLADGAYTVDVTVADAAGNSTTETDTGSV
DTVAPTLTVDAPDNSNDATPTITGTTNAPENATVSITVTGSNNVVQTLSAPVQANGTYSVDVPSDLAQGTYTVEATITDTAGNSTTETDTGSVDTVAPTITVDAPDNSNDATPTIAGNTNAPVGSTVTITVTGSDTVVQTLTATVQPDGSFHVDVPSALEEGAYTVEAAVADAAGNPASANDTGSVDTVA
PTLTVDAPDNSNDATPTITGITNAPQNTTVSILIKDANGVEQTLSATVQANGTYSVDVPSDLADGAYTAEASITDAAGNSATASDNGSVDTADPIIDLTVVGEVESGFPIISGTCSEPQGTIVSVVVTDSNNVEFILSAQVDANGLFTVAIPVTVADGDATAVVSVTDLAGNETILNATIPIDLTAPVIT
LESLGSIDANANLPSITGTCSEPVGTIISVTLTDSAANEFNLTTTVGVGGLFTVLIPATIAEGDASAVVSITDIAGNETIVNATVPIDLTAPLVTLDKLGDIDLNLGLPVITGTCSEPQGTEVRVTLTDFVGDDHTLTATVGIGGLFTVAVPLTVAEGDASAVVSITDIAGNETIVNATVPIDLTAPLVT
LDKLGDIDLNLGLPVITGSCSEPQGTEVRVTLTDFVGDEHVLTATVGVGGLFTVAIPVTVAEGDASAVVSITDIAGNETIVNATVPIDLTAPLITLDKLGDIDLNLGLPVITGTCSEPQGTEVRVTLTDFVGDEHVLTATVGIGGLFTVAIPVTVAEGDASAVVSITDIAGNETIVNATVPIDLTAPLVT
LDKLGDIDVNLGLPVITGSCSEPQGTEVRVTLTDFVGDEHVLTATVGIGGLFTVAVPITVAEGDASAVVSITDIAGNETIVNATVPIDLTAPLVTLDKLGDIDLNLGLPVITGSCSEPQGTEVRVTLTDFVGDEHVLTATVGIGGLFTVAVPITVAEGDASAVVSITDIAGNETIVNATVPIDLTAPLVT
LDKLGDIDLNLGLPVITGSCSEPQGTEVRVTLTDFVGDEHVLTATVGIGGLFTVAVPITVAEGDASAVVSITDIAGNETIVNATVPIDLTAPLVSLDKLGDIDLNLGLPVITGTCSEPQGTEVRVTLTDFVGIDHTLTATVGIGGLFTVVVPITVAEGDASAVVSITDIAGNETIVNATVPIDLTAPLVT
LDKLGDIDLNLGLPVITGSCSEPQGTEVRVTLTDFVGDEHVLTATVGIGGLFTVAIPVTVAEGDASAVVSITDIAGNETIVNATVPIDLTAPLVTLDKLGDIDLNLGLPVITGTCSEPQGTEVRVTLTDFVGIDHTLTATVGIGGLFTVAVPITVAEGDASAVVSITDIAGNETIVNATVPIDLTAPLVT
LDKLGEIDVNLGLPVITGTCNEPAGSLVSLTLTDEGGTDHILTSTVLDGGLISVAVPLALAQVIEGDIDIALSVTDAAGNQSTEASQGLIDITAPTLTFDDFSLFNVLAGTYTLTGSSSEPAGTIVSINISALGLVTIDTQAVVQAGGGFSVLVEIGLLPDLLNIEGSVTDISGNTTSAVNTYSLLDGLL
AAPSAPSAKTAVDPVAEEETLNFALDDEDKINLSFAIEESNTEIGAQSTDNVSEVNDESAEVTLDIADLITDPADELFTTPEDAEVVSVMKNAESSAASEPATDTLSVSFADQELLKSLVQNNSLTVEA
Molecular weight: 468.66 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|Q15MS4|RL34_PSEA6 50S ribosomal protein L34
MKRTFQPSNLKRKRSHGFRARMATKNGRKVIANRRAKGRARLTA
Molecular weight: 5.12 kDa
Isoelectric point according different methods:





General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4,254

17

4,271

1,480,348

33

4,689

348.0

38.6 kDa
Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

8.85

0.98

5.85

5.79

4.29

6.82

2.3

6.19

5.05

10.11

2.51

4.5

4.77

3.94

4.39

6.91

5.48

6.91

1.24

3.11
Note: For statistics only major isoforms were used (in this case 4,254 proteins)
For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI: proteome isoelectric point database. Nucleic Acids Res. 2016. doi: 10.1093/nar/gkw978       Contact: Lukasz P. Kozlowski