Proteome-pI - Proteome Isoelectric Point Database statistics

White bream virus (isolate Blicca bjoerkna L./Germany/DF24/00) (WBV)

Taxonomy: Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Nidovirales; Coronaviridae; Torovirinae; Bafinivirus; White bream virus

Average proteome isoelectric point is 7.11

Get precalculated fractions of proteins

Acidic

pI < 6.8

6.8-7.4

pI > 7.4

Basic

All

Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC_method)

Get csv file with sequences according given criteria:

* You can choose from 18 different methods for calculating isoelectric point

Protein with the lowest isoelectric point:

>sp|Q008X5|R1A_WBV24 Replicase polyprotein 1a 

MSILFGNRQANATKRSDMASVARAVYEVDLISTKYARRTQERLAHNKHAKPSYPSVFFGRRMKAVKEPTFTPSTLFFEEATLPKVLASKAKPDTGIKTRRVYVADSLTINGHTYPIVGHFVEMAVSKKEAFPIQPKRVKPKPLMAKPIPNIRRTFLTPEERTNTPTTPTTTTTTPFVAGETAGPTIEYTP
TSIDLPFAMPTVKQIKENAHTILREQDDCLRFAQTALFKHLGTVTHTTPNHATTFQVKGRTSLLTFEWRKTTQSPLTDGHFYLQTANNHAELMQPVEGKLTTIFTTTIQQGTTHSLHLIKQESARTLKTRKPLKLVTYKQETPTTTITPQSLKKTITYIPGSFCINVAEPTLQSVMRRQPLTPTPNDALL
QIYHKLGCTTKSPNHASTFELFGNTYTWYPVQHTNNLLHKDPNRRFFLHITGQTPQLLIRTERKTFLTLQDEVTYISGKLFVMNHAPIQGEYKTQTAEWVGSYNMAKTPKAIKPAKTVEYINTTPCHKPATMPAPITYRQCPYTWTLHEPSISKVQRNLFHIPKTATNCLDRIQKALFPEIVTSNQHFPI
GFTIQTDTTMQSYEWAILCKKVTRTYYLAVQNHHATLWYKCAQVYMCLSDDIAPTTELQGSVYILNKVTDPGFYQNTRQWCGSNDDLHEPKHLIKNLANGDVNNIAHCSLTPWTTTPLVYSTQKNKLTRKLIHYYNATYTVQVPKENPNAQPSTMKCAYKAYIDLATPTELQIHLDLEIQGKLYSQTAQK
KGSKFNKLDIPTFGDILKGTLYVFSSKVLLYEQPKRCTSVCFHLPNNAQSFFFNTETIQTFEDLFARISSEEVEDNLVLIKGFVPCLGAIYITKDLKFIQPELKEDFKHPTTYYTFTTTVDPEQVLYSLHPSFTDIVPPHGFPYYTFAKLNNHIDAWNITDDQADTLAEAQPIIFQWPTEEATITTPYKV
LHYEHLEGLDYISLSSFNTVECPEETQSAHDSSSESESEDEELPAHPLSNAPSQASLSSVASTAPPTSPTSSPTPSPTPLQQQVGLKGKEVPVGGWVLVSEEETPSEEVDSPKLLPNEVPLSFDFDLPIEPITRPISPELQQPILTHYEHPTSPTPSVEIEIDFGSYENLTLQTEETVTTEVQPEPTPAP
TPEPTIVTETVQETPVPTETTQESTPESTPESTPEPTPESTSESTLEPEHVATPSQSPTHITVTEITHEPETPDSWSERYDSTSNIPEVFNQLSFGSTDSVKITTPKTETPDEPQQPTVETVSAAQQLLQIVQTATPDIAQLMSELPPYRLICIGSYCPILAENISKQLPTAVTTPTDADIPTVIFNVSE
ETMDTVINTVKTKHQANHLTFSLTTIIALDVPKDKSLPLQQIYDKLTQQDYNTDFIYESHHRQPKESLTHASVLSAYTASYKTTAIKSIADNAVVLDIGYGKGNDGPRYAVRPLTVTGIDTAARMLAIADQNKPENVTLVKQGFFTHITKTSNTYTHVIAFNSLHYPLASSHPDTLVQRLPTCPANILIP
CHHLLEGIQTPTYSVVKDEDMWCVKVTKNEFIESSYNYDVFVKALESKYHVTIGSLLDCVEKPSTRSITPTLWTAMRNFVNNDQEMQRILSGYITFNLTPLPPKVEIINDWLDNNATVTINNPFASNEGVTFAVHNIGAITTTEGEFIVNAANKQLNNGTGVTGAIFAAHDKELKLTQAIKALPTYGASD
KLESHQHVVQTIIKNNNSTHAINILHAAAPIKVKCTSKNPEVLLAHNETAQSELKETYKAIVDYAQLNKLTHIYLPLFGAGAYGHKPLDSLEAFLDAMRNRSPQSTTQYTLLLSDPVKPLDNPSFSYEFLNLLVTNLNINKQFAQLIVNKYHNTCALQSAIQMNTTTDTHNFLATFIYLLYTMPYSMNTF
RQTHTPEEPFTPGKMVTVVDTTIAFLTTLDILPPCGQPCGYLPPSITKDGEYICACQKTSNWSLPFHFYNARYNKVYHTGLNNILTHKHSAFHKSRNAAHFIAKTGPSTSSYPVYMAPVPEILAYNASYRDSCQDNAIEEQSDSQASQSPSSPVTIPVSLPTASPASSVKSALRSDIPITTDQQSTTSAS
ISTATTASTIPTAPLTSSDSNTSVVTSLYGNMEELTYLDASGTSQDFILSETTPFIAHIYHNNEATFIPPGYQLLDTNTNDPIEMYITPPRPIDGSPMISLASTASTTPMTYPLLSIRLTTEELTSFFKTKTDKFHLISHKSCLTVHLFDSPTLNSIAADSTSDAHLYQQHLKDLYTFSDCCSMYTRTEV
YNCIEADTPLIRQSEQTKFHPINLDTLIEMVATFPPIVKRYSQTTTPDFTNLTVYFVSNGDIITTPTGSTSEQPPQLKIFLDYQTSSKFTTLVDLTLHEQTEANTIITYHHGEHQLLKPNPSAFYIEFQTYSSFFSRFQTFSTNFFWTLFINFLINVRFCITADSAYFHWQGKPIETTNLNIVYSIGRLD
FVLSKHTTPWLTKPTDTLNPLTLIKNTLVQPIAINFHGRIRPLQSTNTRFGATHTPTKLPVHLLNTSLRTHYLSLLSLFQCTFSVFLAYIALLYSFSGHGIFTVVAYFTMLFARYYITSFINFCTSQLTATQVTQWFAAIKAKYTGIYESSQDRVLTVNVTGTNVPYIVKYSTILTVTMYVAFMAFVWTV
STYAAQYTAGERYDRPPYQTVFQKTLNVLGLTETVTYYYPYASLNEACAASTSILCRLGSPFNFHYPSDYTQVRTVQTDTSSPFWLFIIFMPPSFLFIVLPWLILCTITPTVSIAQLLVPSIILNATIVFIYIRRKFTGHCCGPHTCIKHADISRSLQFRPTSQIQHSLTFCGTLCAKHNWYCNNSDSPT
HTLGIQLAQLIETTYKLQPGTIKPDSSYTHTTETATLPIMKVSTTSTDFTTSEPNTTVEHLHLQVIAHVTGTRISIESSSNKVQQQNTQHTRLTNKPVTGFMHTTLLQKLKRQHKDELSSYLCNFVPSDNKKDCILPHSVVHMTLTENQRTFLLKNFTFSTNVTVDPTTTGFIPSSLNISTLPHKHFMIN
VIESAMLAKLPKEVQDTLRTTHLETTTLERQAMSLTTQAILTTFALIMATFVVAFLAFFSTAQVGKTPYAGLNPTMVGNVNAEPYIQPTTLENSILIPLHGASKVCWRAQNGTLFFTDAIPTTECARAAVPYIGYKSEFTQTCASSNLRYPFTVYLGSIKVMYLRDGISYLTSTLSHNSNTKKLCVQVGS
NAVRCASVLPTGASSNVAALLMASVVVISMVLFYLYLLQIFKFYTNSVIMSFVIQLLTLLATTVSTPLAVTVQLFVITYGYTNWILLTLSLLNLTVLLSTPVGITFVVIYGLYKAYTLFTSSGQGCVYNEGGTIRFSGSFEQVANSTFPLTNASCVQLLSDLGITYQQLNVYASSRDRNVRRLAQALLHR
QLDSASECILYEGCSGNTITRQALQRIRQAVTVVVTPASQNLCKITSNQANGIGLSCTGTFFTSTEIITCAHGIGTSDITAVHKGITYDCKVKSINNDIAILITTTVNLSVQNIKLDSSFSQKSDNYQRNFVQFVSFVDQQNSDAVTINNTVMLPSGHFFAIGTEAGESGSPYTLNGNIIGIHYGIDNAG
SWMLASRPDGSFYVPATQHGNSAKVTFSTDAFAQQFPAIVTNKTSDQLVNEIAATNNTAFELDTTDVSHLSNLLKHLKNNNETPKSLSDYLPVAPVTQQTSVTVGQTLTSPVNNMQTALYTLMLVSEVITYILTPNSDLSVLISMFVTSAFLKFGASKLFYNTEMLRNTITTFVVYRYTTLLIALVFSQY
YLHILSYALKLNTLVLTVIALTFLVTPLVLLTIRRVYYYSQNYLISCVFIISCFASHTYTLYILTDTTVDFQTFIISEPIFSTLLCNLFIGFTLISVVPNPLYVCVVFMYILLDCEALGFIVTCFMASYLCPKPLRSLTTFLCTDTLVLTAPAYLHWYGAKGTQREYSVIYAVFDSILTPETTIQIPVTI
MEGIEQQVKFIFAVPKSANIQDEEEAYVEYNQNSDIKDLAIKNEEKVCTITGMFRKTRTIKGTLMESFYPRHQPDSYILNQVVRHNYVLAHDPETIILTTVNPTHLESEPFQTIVKKVRKLHALYQEISEQSSDDTELCHAYILALIKSTVLEAQMPTEKINFVSSQTMLSPAMILIFAEAYQILTESRS
FTNHITPQSDIGSMQTTLASLAEMDTDEMTPQERKIHIKRMNVLKQEIAKMESASLKLEKFLDNMHKAEISKRGKEDILLKVSNMLRLHLNKVANAAHCTIQTPSAGLITLASAFDVHSLCVTQHSESVLIQTPDDDTFLVYVDGQIYTCYNPTDITGKKLVPINVMSPDNVQFPTYPVVFSLSKQDYAE
EITEQNNIGYTERTHNFKLKELASGLAVTLDGLVVVTETKELATAFKIGQRYFKFLNTNKTPVARNNTHAIIQLLRNNISQQAVVRIGGSRVSNDHIAISQVPVQTIGYLTYAGISVCRQCATKQDHTCQYAGYFVQIPREHVSNIFNLTDTPPCLHNKFTCTTCQPLQQQSKTQQPPLNWWGSV

Molecular weight: 508.99 kDa
Isoelectric point according different methods:

Protein with the highest isoelectric point:

>sp|Q008X2|NCAP_WBV24 Nucleoprotein 

MSGMYPQPLMMMPQQQRRPRKPRTKSAPKPPTTSKMSEKTKKEVTKSTMSTEKQIPMPTIPAASKGSLKDLDVRNNLNQQELNGIYYDTVNNLNACHGRMIFQPTGGSLTEGTLTVTIKLRVKSDQCLKMCSAFHKRNTNLETPLSAVDISKESEKSLGKD

Molecular weight: 17.97 kDa
Isoelectric point according different methods:

General Statistics

Number of major isoforms	Number of additional isoforms	Number of all proteins	Number of amino acids	Min. Seq. Length	Max. Seq. Length	Avg. Seq. Length	Avg. Mol. Weight
5	0	5	13,035	161	6,872	2607.0	291.6 kDa

Amino acid frequency

Ala	Cys	Asp	Glu	Phe	Gly	His	Ile	Lys	Leu	Met	Asn	Gln	Pro	Arg	Ser	Thr	Val	Trp	Tyr
6.15	1.86	3.97	4.2	4.7	3.66	3.14	6.65	4.85	9.28	1.7	5.34	4.96	6.04	2.64	7.68	11.85	6.21	0.64	4.49

Note: For statistics only major isoforms were used (in this case 5 proteins)
For dipeptide frequency statistics click here

See this proteome in:

Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI: proteome isoelectric point database. Nucleic Acids Res. 2016. doi: 10.1093/nar/gkw978

Contact: Lukasz P. Kozlowski