Methylophaga thiooxydans DMS010

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga; Methylophaga thiooxydans

Average proteome isoelectric point is 5.99

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All


Virtual 2D-PAGE plot for 2,492 proteins (isoelectric point calculated using IPC_method)

Get csv file with sequences according given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 18 different methods for calculating isoelectric point
Protein with the lowest isoelectric point:
>tr|C0N8P2|C0N8P2_9GAMM Type I secretion target GGXGXDXXX repeat protein domain protein
MATQIGVVKALIGNVTATATDGSSRTLQVGDNVYANELITTNIAAAIEIELNDGSVMDLGRSSQVMLDNAVFDLSATTTVATETDDVPDDIAAIQAALLAGDDPTEVGDATAAGAGVVTGNEGHAPVFVDYLNPTVRPEAGFDTIGVFNEYDLPEEDIIILDEEDGSPTTGNTEVFVDEDDLGGDIQISF
VGPSAIITAFGSDTDYFTTFPFKFGNNDEEPGDDLPPNSSTTQTGKLNASFGSDGAGSVGFQAEAAQPSGLTSGGQPVLFWVSADGSMLVGYTLTSDDYYGDYDFVRIDQNYEFQPYGMAEIIFTAEIPDSGTTDYAFTLHGPLDHAPGESENNLFIDLAYTIIDSDGDAASGVLRVNVDDDVPVRAEGD
EEQAQIIAQVHEEGMSTLLGDAGDLSEGNRDGGLLTDDETGSHIAGSLHYVVSVGADAPATFSLIDDSATLNELLPGLYSQGESVTYSVSGDSDVSVLTAMAGGRVVFTMTVHSNGDWYFDLDDQLDHAAGDGENFTLLTGDGGYDISTVGSIDFTKILKVTDADGDELVWTDDDVEVFAVQVQDDVPTL
VSVSGEFNPVTALVAEDALSTAVEATDSSEGILDAGQDNSDDEASGVAGDLSSLIVVNDGADEPVSVTFGLQADTSGLPTLYSNGEAVSYSVDGNVLTAMAGGTIIFTLTVNADGSWAFDLDDQLDHVDTDSDTTTDLVTGPGSSVGSIDFSSIITASVEDFDGDVATLNGLNAGLFTISVQNDVPVANN
ETPIALTEGDAAINGNVLTNDVPGADEPITLTHVDLGDGFVDITTGTDLGSGNYGFSIDGVGDYSFNANGNWTFEPADSVNNTEGDVDASFSYRIEDADGDNAEAMQPISIADGQDPLAGEPITLSLDDQNLADGSTPAVDDFDTGSIVFTPGSDPIASIVFSMDLSGLDPSLTWERVNDNQIIGRDGVD
DIVTLDLGVIGDTATITATLNNNYDSHPTVNVDDLKALGSMGVVATDIDGDTATGIVNVEVSDDLPTAVNDGPETVTEDATSFVSGNVLDNDDANADQAAAFVGWSGADAATIATLNSFGTLVQNGDGSWSYTLDNSLATTQALTAADTMDYVLNYTMADADGDEDTATLTITIKGADDDATVETAQAEG
PDATVYEAGLNPDGSDAASDSETVTGSFDVSASDGIINVVIGGATFTLAEVQAFDGSDSVTTGEGTLTLTGYTGDAMGGTIAYSYTLDGTIDNDSIVPSGDDAVTLAHFDDSVEISVNGIGGTTASDDLVIRAIDDTPTAVNDGPETVTEDATSFVSGNVLDNDDANADQAAAFVGWSGADAATIATLNS
FGTLVQNGDGSWSYTLDNSLATTQALTAADTMDYVLNYTMADADGDEDTATLTITIKGADDDATVETAQAEGPDATVYEAGLNPDGSDAASDSETVTGSFDVSASDGILNVVIGGTTFTLAEVQAFDGSDSVTTGEGTLTLTGYTGDAMGGTIAYSYTLDGTIDNDSIVPSGDDAVTLAHFDDSVEISVN
GLGGTMASDDLVIRAIDDTPTAVNDGPETVTEDATSFVSGNVLDNDDANADQAAAFVGWSGADAATIATLNSFGTLVQNGDGSWSYTLDNSLATTQALTASDTMDYVLNYTMADADGDEDTATLTITIKGADDDATVETAQAEGPDATVYEAGLNPDGSDAASDSETVTGSFDVSASDGIINVVIGGATF
TLAEVQAFDGSDSVTTGEGTLTLTGYTGDAMGGTIAYSYTLDGTIDNDSIVPSGDDAVTLAHFDDSVEISVNGLGGTTASDDLVIRAIDDVPAAEDYIGGSYAEGSSNNVVAADAASTLGIAGGADGLNSTLPAISFTGGQGSLFINGSGQLIYTPPANVVNPGGAPVSDVFSYTVTDNDGDFVTKQVTV
GITDTGVTELSASNALVDEDDLPMGNDDSATGDDNPITSGTISYTVGADGFDSVSLSTTADTTGLMTHDGDAVDTIWDSGSNTLIGYVAGTDSSDAANQVFTVTLTNINASGADYDVTLLQAVKHPDADNENNVDFTVNVSVLDNDGSEGITSFNVSIDDDVPVASPEENSGEATLEVNTNLMMILDVSG
SMNDSANFQGMTRLQVMIKSSLELLDQYDAYGDVMVNIITFATSASNPSGGWVTVDQAKAIILGLTAGGNTNYDDALNDAINAFALGGKLGDGQNISYFMSDGEPNSNNVSNSATVPDGNNNLGGGSGIDSDEEDDWIDFLELNNINSFSLGMGTGVDEDELDPIAYDGVEEVDTDSIVVSDFADLQATL
IGTIDVPPLSGNLIDGGAGADEGWIYSVTVGGVNYIYEQPNDNQSVSGGASNGSFDDTTNVWTITTPEGGTLTIDMDTGDYEYFGPDVVLSEVQEVFTFTISDYDGDMDSSTLTVTIDPAAGPMIVRDDFVLTNQDPVDIPDWALLANDTGPDSGSQIVSAVFNADEGSVTDNADSIEFDDNDTDGGSFS
YTNTAGTRSDDGNVSVERQSGDTIQGDYLDEILIGGSDAETLNGGAGNDILIGGDGSTASIVPRTVNAFVSGGATNGSNNNQYSFAFVAGAGLYITEIRIDVSGIGTFNQSGGGSKAFTIGSSTDINLADITTVTSGDTTELVITFDPNAFIEGETLYFGIDANDGDEDLDHGGDFGDENVPFSVSFNDG
VTINSNYVDGPGSGTNGDTSQGTAQITANTVSDDVLNGGAGDDILQGGGGNDLLSGGNGDDIFMWRAGDDGTVGSPAMDE
Molecular weight: 280.95 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|C0N5P0|C0N5P0_9GAMM 30S ribosomal protein S20
MANSAQARKRARQAEVHRLRNASQRSAMRTSIKALRRAIAAGDKEQAVAAFQAAVPALDRMARKGIIHKNTAARGKSRLNNAVRAM
Molecular weight: 9.39 kDa
Isoelectric point according different methods:





General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2,487

5

2,492

780,044

37

3,937

313.6

34.8 kDa
Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

9.02

0.89

6.05

6.29

3.92

6.86

2.42

6.27

4.76

10.5

2.68

3.96

4.82

4.03

4.97

6.14

5.47

6.86

1.28

2.8
Note: For statistics only major isoforms were used (in this case 2,487 proteins)
For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI: proteome isoelectric point database. Nucleic Acids Res. 2016. doi: 10.1093/nar/gkw978       Contact: Lukasz P. Kozlowski