Proteome-pI - Proteome Isoelectric Point Database statistics

Satsuma dwarf virus (isolate Satsuma mandarin/Japan/S-58/1977) (SDV)

Taxonomy: Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; Secoviridae; Sadwavirus; Satsuma dwarf virus

Average proteome isoelectric point is 7.81

Get precalculated fractions of proteins

Acidic

pI < 6.8

6.8-7.4

pI > 7.4

Basic

All

Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC_method)

Get csv file with sequences according given criteria:

* You can choose from 18 different methods for calculating isoelectric point

Protein with the lowest isoelectric point:

>sp|Q9WAL8|POL1_SDVS5 RNA1 polyprotein 

MEIYGFSPLSFQDTESWKNSAFAACRGCKTYPIEEVGTDGSVRIRELPVGLVLKGVMAQYRSILWTQFVADPATTTVDRKSFDFWLFCRRAEAAQERAFRARQSKRAAKAAALDAEGLIDRSYKGRTYKVSTRGLSWKSVRAAQKAARNAAKNFGFAISANPFSALSALPSEGKGLSAGETPATVAEVAP
QCFWAALRSLKREFSETPVEDLPFLGLVLPALPQRNGELARTLRAQLRAHQAARVVASGVSLREIPRRTTTTVKVVVPRVTIPVVTFNGAVLHHPKHPVIVALLKRVTIRAKPICERRTYVRLVDGPGLFPSPRTPTLDLGFMEKVSELATMPGDSIEKCIAIKCILSNDYNFKEDADMGDVLLSLQSKY
TGGGDTAEHRGFISGALYGAGVCVVTSAWKFLDATLHASQIGTQISQILDYIQSGLAWLSSSYASIANFFTKGKVYIMECLELVKAKLPSYLFSAEVGRYILLLLGVFLCLGLVNSLIYSVAPQYSLSFGTVCKISLGALALVGLGDLVAYLFNSPGAKLRAFVNIVCNMCGCKNFFAPSSDGEERSGFS
VLSMMGAICALQSLLPANVSRFSWDCGKWAQTFKTGFDCHEKFATVCESLSVWLLSKVGLFKSSESQAMQTILLSSGINTCGWLEKVAAFHSDVHSSQICIPDLLLRARQLIETGDTISDLLSNSTVSLSFLLRERIKLALRELKEDHTQLQLAVDVSVSSECPFVLFFAGDSGVGKSTAMKKFREEVLD
KLGYPKTARFYPRNPGEKFWSGYLRHTAVIYDDFAQIPQGDMTYDEAELIRIVTNAVVTVPMAIAEEKGRTFRSKFVFACTNRYCESEDAPLADEMAFRRRRHLYIHVARKPGVEPGPRGVDNLEFSEMDNRDSNGEPAYQLNDQGKRVLINQKLTYDQLLQLYFERYQAFKVLEGQLEGSVARAPSSSN
YEGCDNWWTLVGSEAKFEAVYFNGEPVSEDDQLTQLGNYKTRYDILRARVILESIDYADCDFIIKNFSAMGEGIYHADPEVNATGQRHFSAMSPVTRRLICSCLKTRREDEIKSHSLLSKFKSLLTVPVDAWKAAPAWFKCISLLLVAGGVGYALCRAISGIIGIFRKGPAAASLALFSGGIGAVLRGDS
PDDPREERDNPDVIVTKGRGKAIWAGAEIPEALEALRKSQVVLMGTGRKGEPVMCSALPITSHSVLCTTHEIEAFDPNQNMSLIVNNSIYSFVLIPGAIMYKRYDQPNLVDKVHELVRVDLPKNKGFSLNARAQFSEDFYDNGTAMKCWVVPNKNPAVADIMRKVDCEKSSQIIDIFASELSRSSGCEPV
RQTQRFIYADGPALNGHCGRLLCANLAGHWRVIGMCAGEGKNRAGVTKALYADIPHEFLRADNLNAVQRGAELDAAILDRFSIPISECRKELTPMTTRLGYVVGQYPRALRKTSIVPSIIHDNLWRKPETEPTILGKIDDRSPFPYDPYATIGEKFVQEVGPIDLSVGSDASLVVANIGSSWKAVGKPQC
PTVLTWEVAINGDAAIPYCERLPLSTSEGYPDSIQRNFGEKGKKRFFDLKGENVRVPTPALMEELEVLERELQKEEVCLTCINTACAKDEKTAPKKVRVQPKTRIFEILPFQINIIIRRYLMFWMQLLMVAHDELPSKVGINVYSESWDRLLGRHTRLANHFTGDYSGFDTSTPRVLVYAIIDKINELAD
DGEVNQRTRRNIIRFVLNRYLISDGVLYEIHGGTPSGFAPTVMINSVVNEFYLKWSWIGLLKEAGYANQATLYAFHEATEISLYGDDNFVSVATPVASVYNLTTISNFLGRIGVKLGDGAKTGTIKPFIPLEEVDFLKRQFVADSGSTAILCPLKKISIEERLFYVRGGQDEIAALELNIATALCEAFFH
GKEYFSFLEGKIIEAMRKSGVALSRPLPTMESVRAWYMSQRGNTKIRSPSFEGLGTMSGILNIGLAEARSVGGVACFSGIEFRGRSDDHLMVIPTYIPGGWRTKQQQTYISFVRDSEKMAQVIKRVAHFSTVVATDKSMAYLVAICIAYSRGSISRMEVRCHVQNLKVAEMLLCNQICNFL

Molecular weight: 230.45 kDa
Isoelectric point according different methods:

Protein with the highest isoelectric point:

>sp|Q9WAL9|POL2_SDVS5 RNA2 polyprotein 

MEIYGFSPLSFQDTESWKNSAFAACRGCKTYPIEEVGTDGSVRIRELPVGLVLKGVMAQYRSILWTQFVADPATTTVDRKSFDFWLFCRRAEAAQERAFRARQSKRAAKAAALDAEGLIDRSYKGRTYKVSVRGLSWKSVRAAQKAARKAAKNFGFTISENPFSALPSEGRSAFSAGETPAPPACALPNI
CWAARRASAKSASPADVESLPFLGLLPESPRLRNEGLLSLLRAKLADFKAARAPLVPIAKRVVKTPSEDSIWESVEKNAPIVGCVINGMVGIPKNPIIQRLLPERKYIARKCVRAFVPQVMCSSRHKHDFAQLRNPDKWIVFPSVIRISTVDAYATARRLGLINDCSSALERVKAFSSHHLDLEKEVSRL
EREACAAPRKTIVARVFKFFFEEYALAYDEVVERLRAAKEDRRREHLAFLRNIKRQAHELELKERQSFLVAIEEARIKSLELKAKIEEGPPPQILYTPEWHVVQRAKAYADVTMSPSERDIAHLAYENKYVNARAYPNTDVAAKFRARCDAHFERIFGYAVHRGTRTETLTQVAESPPPIITAPVGQRVG
GNPPTETPGAAAVRAAMRRAVERNRPGPGESSAMPAREPLLSHRGQYYARSLSDRYNNICSRNNAYDLMRETDVPIMEFTFGQQQDIAIPLSSRFGNHQSLHVGELEIAVQSSVLTGVDTAMAIMVSDASHDRLEEGFLSLTILRLGAGWMRHTIPIGITVFPTDPLVDRFLRLSVLTGGSPMADGRQVA
RLHYGLLGQAYTGAGEQRLTQYATRRINVRQTHVTQFLEGNHIHIARSEDRQQPLPHMSLEFRPLSGSTRYVARPGGYQAIESGRQSVDITQNFIRMPTHLTRSATDREETPAPNNPNEQNVGRSEINAEIPTNSAEEEERRRRTPHGSAIHRGYTEFSERNENLIEHLYVPSMHGLSLKEDIHLFTKNL
EIPSTADFCKELARYSGLTEAMSYRGASYYSRLLSGVAILRPHFKFTFRLVTPILESIPLFVVWDDLGQLNTKVSLLSSAFQVIDSDHTRAAVYEVRPSGPTDLLTPSKANYGVGGDLVIFSGGYGSLSLSSPLRLKIEACLLKDTSLGSGEIALPQGPSSMLSFHYLNEVDLGDVNMHIFLGSCKYKSS
STVGGRKYISVCPAAGLVHKGGKAAYLGLGASLFSLYNFWKGSYVLKVDVLSKGSCAGAISIYIPPPGSSADHYSQSQLDTLPRYELPWRGSGSARFEVENFSWIGWHLTKPQRYITNEDWFSLNAGLLVVLNQPPTTRTGGSSDIRVIFRIVKFKNLTLKERSTTCDIFAGIKDSEYTDPLVDVLDENI
TAPSASSLTTVQDPDLGLETTSSAQTSGLTTTRSFGAYYAYLLGGESAGNRWHSYVLPITMGHHREMIGASKTGYLNTQLDETIRIRYSLRNPLHILCSAGAYYAVDLLFTLVVDGDHGAERAYTQLGLIQTPLMEYFDGYSASRNLSSEGGYSNQLGVGKSYVQLIVPRRNYRARSITTNTGALFFETI
GSLTVKFAVSAKIKGVHLYVEPVGPIDVDGYGRGADISLTNENFVLMPSLRTAA

Molecular weight: 174.41 kDa
Isoelectric point according different methods:

General Statistics

Number of major isoforms	Number of additional isoforms	Number of all proteins	Number of amino acids	Min. Seq. Length	Max. Seq. Length	Avg. Seq. Length	Avg. Mol. Weight
2	0	2	3,655	1,574	2,081	1827.5	202.4 kDa

Amino acid frequency

Ala	Cys	Asp	Glu	Phe	Gly	His	Ile	Lys	Leu	Met	Asn	Gln	Pro	Arg	Ser	Thr	Val	Trp	Tyr
9.11	1.89	4.46	6.07	4.4	7.11	1.94	5.72	4.71	9.47	1.7	3.42	3.01	5.01	7.06	8.15	5.31	6.84	1.2	3.42

Note: For statistics only major isoforms were used (in this case 2 proteins)
For dipeptide frequency statistics click here

See this proteome in:

Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI: proteome isoelectric point database. Nucleic Acids Res. 2016. doi: 10.1093/nar/gkw978

Contact: Lukasz P. Kozlowski