Tomato spotted wilt virus (strain Brazilian Br-01) (TSWV)
Taxonomy: Viruses; ssRNA viruses; ssRNA negative-strand viruses; Bunyaviridae; Tospovirus; Tomato spotted wilt virus
Average proteome isoelectric point is 7.09
Get precalculated fractions of proteins
Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC_method)
Get csv file with sequences according given criteria:
* You can choose from 18 different methods for calculating isoelectric point
Protein with the lowest isoelectric point:
>sp|P28976|L_TSWV1 RNA-directed RNA polymerase L
MNIQKIQKLIENGTTLLLSIEDCVGSNHDLALDLHKRNSDEIPEDVIINNNAKNYETMRELIVKITADGEGLNKGMATVDVKKLSEMVSLFEQKYLETELARHDIFGELISRHLRIKPKQRNEVEIEHALREYLDELNKKSCINKLSDDEFERINKEYVATNATPDNYVIYKESKNSELCLIIYDWKISV
DARTETKQWRNTYKNIWKSFKDIKVNGKPFLEEHPVFVSIVILKPIAGMPITVTSSRVLEKFEDSPSALHGERIKHAKNAKLLNISYVGQIVGTTPTVVRNYYANTQRIKSEVRGILGDDFGSKDVFFSHWTSKYKERNPTEIAYSEDIERIIDSLVTDEIPREEIIHFLFGNFCFHIETMNDQHIADKF
KGYQNSCINLKIEPKADLADLKDHLIQKQQIWESLYGKHLEKIMLRIREKKRKEKEIPDITTAFNQNAAEYEERYPNCFNDLSELKLTFHDLVPSLKIELSSEVDYNNAIINKFRESFKSSSRVIYNSPYSSINNQTNKARDITNLVRLCLAELSCDTTKMEKQELEDEIDINTGSIKVERTKKSKEWNK
QGSCLTRNKNEFCMKDTGRENKTTYFKGLAVMNIGMSSKKRILKKEEIKERISKGLEYDTSERQADPNDDYSSIDMSSLTHMKKLIRHDNDDSLSGKRFKGSFFLLHNFNIIEDGKITSVFNNYAKNPECLYIQDSVLKTELETCKKINKLCNDLAIYHYSEDMMQFSKGLMVADRYMTKESFKILTTAN
TSMMLLAFKGDGMNTGGSGVPYIALHIVDEDMSDHFNICYTKEIYSYFRSGSNYIYIMRPQRLNQVRLLRLFKTPSKVPVCFPQFSKKANEIGKSLKNKDIEKVNLFSMTMTVKQILINIVFSSVMIGTVTKLSRMGIFDFMRYAGFLRLSDYSNIKEYIRDKSDPDITNCGRYLFRNGIKKLLFRMEDL
NLSTNAKPVVVDHENDIIGGITNLNIKCPITGSTLLTLEDLYNNVYLAIYMMPKSLHNHVHNLTSLLNLPAEWELKFRKELGFNIFEDIYPKKAMFDDKDLFSINGALNVKALSDYYLGNIENVGLMRSEIENKEDFLSPCYKISTLKSSKKCSQSNIISTDEIIECLQDAKIQDIENWKGNNLAIIKGL
IRTYNEEKNRLVEFFEDNCVNSLYLIEKLKEIISSGSITVGKSVTSKFIRNNHPLTVETYLKTKLYYRNNVTVLKSKKVSEELYDLVKQFHDMMEIDLDSVMNLGKGTEGKKLTFLQMLEFVMSKAKNVTGSVDFLVSVFEKMQRTKTDREIYLMSMKVKMMLYFIEHTFKHVAQSDPSEAISISGDNKI
RALSTLSLDTITSYNDILNKNSKKSRLAFLSADQSKWSASGLTTYKYVLAIILNPILTTGEASLMIECILMYVKLKKVCIPTDIFLNLRKAQQTFGENETAIGLLTKGLTTNTYPVSMNWLQGNLNYLSSVYHSCAMKAYHNTLECYKNCDFQTRWIVHSDDNATSLIASGEVDKMLTDFSSSSLPEMLF
RSIEAHFKSFCITLNPKKSYASSSEVEFISERISKWSDYSSLLQAFSKLLHRIFAYKLFDDLMSLSIHVTMLLRKGCPNEVIPFAYGAVQVQALSIYSMLPGEVNDSIRIFNKLGVSLKSNEIPTNMGGWLTSPIEPLSILGPSSNDQIIYYNVIRDFLNKKSLEEVKDSVSSSSYLQMRFRELKEKYER
GTLEEKDKKMIFLINLFEKASVSEDSDVLTIGMKFQTMLTQIIKLPNFINENALNKMSSYKDFSKLYPNLKKNEDLYKSTKNLKIDEDAVLEEDELYKKIASSLEMESVHDIMIKNPETILIAPLNDRDFLLSQLFMYTSPSKRNQLSNQSTEKLALDRVLRSKARTFVNISSTVKMTYEENMEKKILEM
LKFDLDSYCSFKTCVNLVIKDVNFSMLIPILDSAYPCESRKRDNYNFRWFQTERWIPVVEGSPGLVVMHAVYGSNYIENLGLKNIPLTDDSINVLTSTFGTGLIMEDVKSLVNGKDSFETEAFSNSNECQRLVKACNYMIAAQNRLLAINTCFTRKSFPFYSKFNLGRGFISNTLALLSTIYSKEESYHF
VSTASYKLDKTIRTVVSAQQDMNLEKILDTAVYISDKLQSLFPTITREDIVLILQNVCLDSKPIWQSLEDKMKKINNSTASGFTVSNVILSHNSELNTIQKQIVWMWNMGLCSHRTLDFVIRYIRRRDVRYVKTEEQDESGNYVSGTMYKIGIMTRSCYVELIASDQDVAVSLRTPFEILNEREYLFDTY
RESIEKLLAEIMFDKVNIINQTTTDCFLRTRRSCIRMTTDNKMIVKVNATSRQIRLENVKLVVKIKYENVNSDVWDIIESQKSLVLRLPEVGEFFSDMYKTADSETETIKTIKNRLMTSLTFIEAFGNLSQQIKEIVDDDIRETMDEFLMNIRDTCLEGLENCKSVEEYDSYLDENGFNDTVELFENLLR
THDNFENEYSPLFSEIVDKAKQYTRDLEGFKEILLMLKYSLINDASGFKSYRATGMHAVELMAKKHIEIGEFNLLGMIQLIKACETCHNNDSILNLASLRNVLSRTYATFGRRIRLDHDLDLQNNLMEKSYDFKTLVLPEIKLSELSREILKENGFVISGENLKMDRSDEEFVGLASFNVLRLDEEEMYE
GLIKEMKIKRKKKGFLFPANTLLLSELIKFLIGGIKGTSFDIETLLRNSFRPDIFSTDRLGRLSSSVPALKVYATVYMEYKNVNCPLNEIADSLEGYLKLTKSRSKEHFLSGRVKKALIQLRDEQSRTKKLEVYKDIANFLARHPLCLSEKTLYGRYTYSDINDYIMQTREIILSKISELDEVVETDEDN
FLLSYLRGEEDAFDEDELDEEEDTD
MNIQKIQKLIENGTTLLLSIEDCVGSNHDLALDLHKRNSDEIPEDVIINNNAKNYETMRELIVKITADGEGLNKGMATVDVKKLSEMVSLFEQKYLETELARHDIFGELISRHLRIKPKQRNEVEIEHALREYLDELNKKSCINKLSDDEFERINKEYVATNATPDNYVIYKESKNSELCLIIYDWKISV
DARTETKQWRNTYKNIWKSFKDIKVNGKPFLEEHPVFVSIVILKPIAGMPITVTSSRVLEKFEDSPSALHGERIKHAKNAKLLNISYVGQIVGTTPTVVRNYYANTQRIKSEVRGILGDDFGSKDVFFSHWTSKYKERNPTEIAYSEDIERIIDSLVTDEIPREEIIHFLFGNFCFHIETMNDQHIADKF
KGYQNSCINLKIEPKADLADLKDHLIQKQQIWESLYGKHLEKIMLRIREKKRKEKEIPDITTAFNQNAAEYEERYPNCFNDLSELKLTFHDLVPSLKIELSSEVDYNNAIINKFRESFKSSSRVIYNSPYSSINNQTNKARDITNLVRLCLAELSCDTTKMEKQELEDEIDINTGSIKVERTKKSKEWNK
QGSCLTRNKNEFCMKDTGRENKTTYFKGLAVMNIGMSSKKRILKKEEIKERISKGLEYDTSERQADPNDDYSSIDMSSLTHMKKLIRHDNDDSLSGKRFKGSFFLLHNFNIIEDGKITSVFNNYAKNPECLYIQDSVLKTELETCKKINKLCNDLAIYHYSEDMMQFSKGLMVADRYMTKESFKILTTAN
TSMMLLAFKGDGMNTGGSGVPYIALHIVDEDMSDHFNICYTKEIYSYFRSGSNYIYIMRPQRLNQVRLLRLFKTPSKVPVCFPQFSKKANEIGKSLKNKDIEKVNLFSMTMTVKQILINIVFSSVMIGTVTKLSRMGIFDFMRYAGFLRLSDYSNIKEYIRDKSDPDITNCGRYLFRNGIKKLLFRMEDL
NLSTNAKPVVVDHENDIIGGITNLNIKCPITGSTLLTLEDLYNNVYLAIYMMPKSLHNHVHNLTSLLNLPAEWELKFRKELGFNIFEDIYPKKAMFDDKDLFSINGALNVKALSDYYLGNIENVGLMRSEIENKEDFLSPCYKISTLKSSKKCSQSNIISTDEIIECLQDAKIQDIENWKGNNLAIIKGL
IRTYNEEKNRLVEFFEDNCVNSLYLIEKLKEIISSGSITVGKSVTSKFIRNNHPLTVETYLKTKLYYRNNVTVLKSKKVSEELYDLVKQFHDMMEIDLDSVMNLGKGTEGKKLTFLQMLEFVMSKAKNVTGSVDFLVSVFEKMQRTKTDREIYLMSMKVKMMLYFIEHTFKHVAQSDPSEAISISGDNKI
RALSTLSLDTITSYNDILNKNSKKSRLAFLSADQSKWSASGLTTYKYVLAIILNPILTTGEASLMIECILMYVKLKKVCIPTDIFLNLRKAQQTFGENETAIGLLTKGLTTNTYPVSMNWLQGNLNYLSSVYHSCAMKAYHNTLECYKNCDFQTRWIVHSDDNATSLIASGEVDKMLTDFSSSSLPEMLF
RSIEAHFKSFCITLNPKKSYASSSEVEFISERISKWSDYSSLLQAFSKLLHRIFAYKLFDDLMSLSIHVTMLLRKGCPNEVIPFAYGAVQVQALSIYSMLPGEVNDSIRIFNKLGVSLKSNEIPTNMGGWLTSPIEPLSILGPSSNDQIIYYNVIRDFLNKKSLEEVKDSVSSSSYLQMRFRELKEKYER
GTLEEKDKKMIFLINLFEKASVSEDSDVLTIGMKFQTMLTQIIKLPNFINENALNKMSSYKDFSKLYPNLKKNEDLYKSTKNLKIDEDAVLEEDELYKKIASSLEMESVHDIMIKNPETILIAPLNDRDFLLSQLFMYTSPSKRNQLSNQSTEKLALDRVLRSKARTFVNISSTVKMTYEENMEKKILEM
LKFDLDSYCSFKTCVNLVIKDVNFSMLIPILDSAYPCESRKRDNYNFRWFQTERWIPVVEGSPGLVVMHAVYGSNYIENLGLKNIPLTDDSINVLTSTFGTGLIMEDVKSLVNGKDSFETEAFSNSNECQRLVKACNYMIAAQNRLLAINTCFTRKSFPFYSKFNLGRGFISNTLALLSTIYSKEESYHF
VSTASYKLDKTIRTVVSAQQDMNLEKILDTAVYISDKLQSLFPTITREDIVLILQNVCLDSKPIWQSLEDKMKKINNSTASGFTVSNVILSHNSELNTIQKQIVWMWNMGLCSHRTLDFVIRYIRRRDVRYVKTEEQDESGNYVSGTMYKIGIMTRSCYVELIASDQDVAVSLRTPFEILNEREYLFDTY
RESIEKLLAEIMFDKVNIINQTTTDCFLRTRRSCIRMTTDNKMIVKVNATSRQIRLENVKLVVKIKYENVNSDVWDIIESQKSLVLRLPEVGEFFSDMYKTADSETETIKTIKNRLMTSLTFIEAFGNLSQQIKEIVDDDIRETMDEFLMNIRDTCLEGLENCKSVEEYDSYLDENGFNDTVELFENLLR
THDNFENEYSPLFSEIVDKAKQYTRDLEGFKEILLMLKYSLINDASGFKSYRATGMHAVELMAKKHIEIGEFNLLGMIQLIKACETCHNNDSILNLASLRNVLSRTYATFGRRIRLDHDLDLQNNLMEKSYDFKTLVLPEIKLSELSREILKENGFVISGENLKMDRSDEEFVGLASFNVLRLDEEEMYE
GLIKEMKIKRKKKGFLFPANTLLLSELIKFLIGGIKGTSFDIETLLRNSFRPDIFSTDRLGRLSSSVPALKVYATVYMEYKNVNCPLNEIADSLEGYLKLTKSRSKEHFLSGRVKKALIQLRDEQSRTKKLEVYKDIANFLARHPLCLSEKTLYGRYTYSDINDYIMQTREIILSKISELDEVVETDEDN
FLLSYLRGEEDAFDEDELDEEEDTD
Molecular weight: 331.5 kDa
Isoelectric point according different methods:
Isoelectric point according different methods:
Protein with the highest isoelectric point:
>sp|P25999|NCAP_TSWV1 Nucleoprotein
MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENIDQIKKMSVISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGGTDMTFRRLDSLIRVRLVEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMISVVLAIYQDAKYKDLGIDPKKYDTKEAL
GKVCTVLKSKAFEMNEDQVKKGKEYAAILSSSNPNAKGSVAMEHYSETLNKFYEMFGVKKQAKLAELA
MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENIDQIKKMSVISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGGTDMTFRRLDSLIRVRLVEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMISVVLAIYQDAKYKDLGIDPKKYDTKEAL
GKVCTVLKSKAFEMNEDQVKKGKEYAAILSSSNPNAKGSVAMEHYSETLNKFYEMFGVKKQAKLAELA
Molecular weight: 28.84 kDa
Isoelectric point according different methods:
Isoelectric point according different methods:
General Statistics
Number of major isoforms |
Number of additional isoforms |
Number of all proteins |
Number of amino acids |
Min. Seq. Length |
Max. Seq. Length |
Avg. Seq. Length |
Avg. Mol. Weight |
|---|---|---|---|---|---|---|---|
0 |
5,033 |
258 |
2,875 |
1006.6 |
114.7 kDa |
Amino acid frequency
Ala |
Cys |
Asp |
Glu |
Phe |
Gly |
His |
Ile |
Lys |
Leu |
Met |
Asn |
Gln |
Pro |
Arg |
Ser |
Thr |
Val |
Trp |
Tyr |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
4.09 |
2.21 |
5.68 |
6.99 |
4.39 |
4.33 |
1.67 |
8.15 |
8.78 |
9.97 |
2.78 |
6.28 |
2.66 |
3.04 |
3.72 |
9.34 |
5.76 |
5.42 |
0.85 |
3.87 |
For dipeptide frequency statistics click here
See this proteome in:
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here
Reference: Kozlowski LP. Proteome-pI: proteome isoelectric point database. Nucleic Acids Res. 2016. doi: 10.1093/nar/gkw978  |
Contact: Lukasz P. Kozlowski |