Soil-borne wheat mosaic virus (strain United States/Nebraska/1981) (SBWMV)
Average proteome isoelectric point is 6.98
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC_method)
Get csv file with sequences according given criteria:
* You can choose from 18 different methods for calculating isoelectric point
Protein with the lowest isoelectric point: >sp|Q89249|RDRP_SBWMN Replicase large subunit
MPIDSSSILGIISEEDVIRAAISTSATKFGSQLHSTVCDHVKETYLDAVERQKVKKKIDVRRDLSQEQLQLLNDLYPERHIVSSNCERGTHSFAAASRKIETDLLLSRIPKRSWVYDIGGNWATHVKRNDGRKVHCCCPTVDIRDSARKTVRWASIEKYLDEKEEIPPEIGERIKRLQADEDRIYANLKS EKAQPEDLDGKWYCGNRFEDCVFRADRAYAMAIHSIYDIDLSDLANALEEKRIKVMSGTFLFSVDLLLGKKSGTLPTMDGFFEVEDGYVKYGFHNDTNPGYKHNLNQLMKYLTKTFVVAKGGTIYYLELTEQRGDVMFFTMTDATEARMNGVVADESFKCIPIDNKDEVVFPIFEVDQKTDALVFSEILL SRDFVQRAIEYTGRLKPAQLTSDNVNTYLTSTNNTIIIGGSSKKNATKVDATLIQQITTTLIVWTELMNQRQKRVLEKLRMQMKDDVDFMTLAHATFLKMFGKVSYYQRALRCFANWISYVHGADAIQFRNVPLYAEVTDRIKLWKNYAPNQGFVLDLEELDVKIKLHEITEREKRDVSRCIVSGKLGEL SSVDNTECGAVLDGKDYKDSRRKTTFEDLLDGEVATNFLDNWCDKTDHFNFSRSDAVSKYAWGMKLLKGVWEFLLPPLHFAPVYVDAEQARIRLNAEIVTVVEHAVTESNVGLTGVEKAEFADAMSFLVGAAKHLEKRKEVAQQAVVEAVEAVRELRKVHSPADVCNAVDLWSAFEKDLDDDDETGTTAT IVEKGKAVCDDDVQVVLCGSSSTSSVEEVSKEAELFVETIESQASSVTETSDVTTEVAASSSDESVMSEVPEKSWASVAEDESDDSYYLRSMIISDKVQKSALPKRPDFSKYSTLQQKAKQEALWYLQCKIVSDRTTLRSIIDDHLRGMFHNGNCELPKDSAFLDYTVDNCGTWMYGKPSRPGHSYGVGF SLDTKQRITKCELVKLMWNRDCRGQMNQKPVNTRAFQYLLLSDLSFMMNELVIYRNLQQVVKKKERTKQARITLRDGVPGCGKSTWILNNANPMKDMVLCVGKEATEDLKEKFMKKHKCAESDLKRIRTVDSFLMHDYDKFRAATVHFDEALMAHAGIVYFCADILGAKKVICQGDSQQIPFINRVESIT LQYAKLAIDETEYVRLTYRSPVDVAHYLTKKSWYSGGRVTTKNSVLRSMKVVGPRDAKPMTSVHCVPYHRDAQYLTFTQSEKADLYKALRAKGPVEVNTVHETQGKTFDDVIVVRLKTTENEIYPGGRKGQPYEIVATTRHRRSLVYYTAIEDRLFEDISDMQDVMESKLMKNLCSELTKXRFGSKYESI LICDREVRVPDVGTPVIIQDFYDRVLPGNSTMDSHFDGYEVSTSDISIELENCTVQPNKNVKVWQDKRGLVPVLRTAMPPKRQNLPVEAMLALKKRNMAAPKLQEAVNEFEVIERTVNRAKEIFFDTSLIDDSEVSTRESNLRWWKRQSTTAKAQLKKETRLLHELDLCYYNYCIKGDEKPKMDRSPQHE YGALQTVVFPDKIVNALFGPAMKEINERIRLALKPHVVYNSRMNAEELNRTVEFLDPEEDFNAFEIDFSKFDKSKTSLHIRAVIELYKLFGLNDLFALLWEKSQCQTKIRDFVNGITAYLLYQQKSGNCDTYGSNTWSAALALLESMPLEKAKFMIFGGDDSLILFPKHLTIEDPCRRLASLWNFDCKLF DFKHNMFCGKFLLKVGDRFKFAPDPMKLITKLGRKDIVDGRLLSEIFVSVGDNYRSYRDYRILEQLTYALRERYRTTEDPTAALVALKKYIFDFKLWASMFNYKGEFVECRVDRNFEW
Molecular weight: 209.09 kDa
Isoelectric point according different methods: Bjellqvist 6.300 DTASelect 6.722 Dawson 6.275 EMBOSS 6.693 Grimsley 6.364 IPC_peptide 6.287
IPC_protein 6.008 Lehninger 6.275 Nozaki 6.547 Patrickios 4.317 ProMoST 6.364 Rodwell 6.262
Sillero 6.649 Solomon 6.275 Thurlkill 6.737 Toseland 6.249 Wikipedia 6.287 Avg_pI 6.393 Protein with the highest isoelectric point: >sp|Q06360|MVP_SBWMN Movement protein
MGSQDVKGDSYESVYNKILDMQSEPGGANDLRTNRQRSFNIENRYVEKALTQPGVVTKMQDAWTNWTKTNKEEGTPYNMSYSCVLLNVIPTVPMGYAGTVEVSLLDSGLSPLENVIPDQTQMMELGKGPHVMCFFMHYSIPLNDKGRAVKLAFKIDAEMASKGMSVMNVYSYWTQRQGHLSAYSEPQRST ISKLMLGYDKSLKMKTRNDVRRFVGRSLSLHNQEQSVPALLPGQINVMKENVPLYRKESVIDLTREEREKAAQLEMLRKTREVHTQRSAEEMKRRQAELAKDTQRKLAEEAKAVTEKRKNMAGVNSSNIKFGNFDSV
Molecular weight: 37.15 kDa
Isoelectric point according different methods: Bjellqvist 9.253 DTASelect 9.209 Dawson 9.531 EMBOSS 9.677 Grimsley 9.604 IPC_peptide 9.575
IPC_protein 8.521 Lehninger 9.545 Nozaki 9.326 Patrickios 4.952 ProMoST 9.019 Rodwell 9.794
Sillero 9.472 Solomon 9.575 Thurlkill 9.370 Toseland 9.253 Wikipedia 9.706 Avg_pI 9.402
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
5
1
6
3,259
174
1,828
651.8
73.6 kDa
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
7.06
1.78
6.23
7.06
3.9
5.74
1.93
4.45
7.0
8.87
2.73
4.02
3.65
3.13
6.14
7.15
6.32
8.13
1.23
3.44
Note: For statistics only major isoforms were used (in this case 5 proteins)
For dipeptide frequency statistics click
here