Spring viraemia of carp virus (strain ATCC VR-1390)
Taxonomy:
Average proteome isoelectric point is 6.02
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC_method)
Get csv file with sequences according given criteria:
* You can choose from 18 different methods for calculating isoelectric point
Protein with the lowest isoelectric point: >tr|Q91DS5|Q91DS5_SVCVA Phosphoprotein
MSLHSKLSESLKAYADLDKTVKEIEEQVSSMEEPVPKTVKYVTFEEDLSEEEWESDSGDDDEDSIDDSLIPDYLRESSSITVDEDEEDQKEDREEHLPTVSWEEEPTGIDIGFGPGIVMPSVSNHEGGTYVRYNGLGGIDPNCKDLISKMMRSLIGQIGNKYGYDIDLFDYQGDFLEVFLPHKPSKEDVR PDIRIGKKNEEGTSKQVSKPREKEKIVLKTGDECGRFPMNKEAKKREPEGLWEVMKVLSVQFDPWKEDEPPLSLTIRDLFISESEFRLHCNHSQTEREMALVGIKLRRLYNKLYQKYRL
Molecular weight: 35.62 kDa
Isoelectric point according different methods: Bjellqvist 4.660 DTASelect 4.762 Dawson 4.507 EMBOSS 4.380 Grimsley 4.329 IPC_peptide 4.520
IPC_protein 4.571 Lehninger 4.469 Nozaki 4.609 Patrickios 4.050 ProMoST 4.673 Rodwell 4.406
Sillero 4.685 Solomon 4.507 Thurlkill 4.418 Toseland 4.418 Wikipedia 4.368 Avg_pI 4.518 Protein with the highest isoelectric point: >tr|Q76UB6|Q76UB6_SVCVA Matrix protein
MSTLRKLFGTKKSKGTPPTYEETLATAPVLMDTHDTHSHSLQWMRYHVELDVKLDTPLKTMSDLLGLLKNWDVDYKGSRNKRRFYRLIMFRCALELKHVSGTYSVDGSALYSNKVQGSCYVPHRFGQMPPFKREIEVFRYPVHQHGYNGMVDLRMSICDLNGEKIGLNLLKECQVAHPNHFQKYLEEVGL EAACSATGEWILDWTFPMPVDVVPRVPSLFMGD
Molecular weight: 25.63 kDa
Isoelectric point according different methods: Bjellqvist 8.214 DTASelect 8.083 Dawson 7.980 EMBOSS 8.214 Grimsley 7.234 IPC_peptide 8.083
IPC_protein 7.337 Lehninger 8.112 Nozaki 8.434 Patrickios 4.202 ProMoST 7.702 Rodwell 7.980
Sillero 8.419 Solomon 8.083 Thurlkill 8.141 Toseland 7.146 Wikipedia 7.907 Avg_pI 7.942
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
5
0
5
3,554
223
2,095
710.8
80.8 kDa
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
4.25
1.83
5.68
7.01
3.55
6.72
2.84
6.7
6.33
9.4
2.81
4.16
3.24
4.5
5.35
8.36
5.74
5.99
2.0
3.55
Note: For statistics only major isoforms were used (in this case 5 proteins)
For dipeptide frequency statistics click
here