Perch rhabdovirus (isolate Perch/France/PRV/1981)
Taxonomy:
Average proteome isoelectric point is 6.22
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC_method)
Get csv file with sequences according given criteria:
* You can choose from 18 different methods for calculating isoelectric point
Protein with the lowest isoelectric point: >tr|K7X0L8|K7X0L8_PRVF Nucleocapsid
MDAGAIVVRSTKASFVPLQPQLEDEINYPADFFVNQKIPTFVRYYENAKPEDLLGMIFGELSESRLPSELVTSYIYSVMSKWTETLDAPWESFGIEFGDVNDILTPFSLLKCIVSDQALADYKTVAVPGDIDPIAMMIFLLAPYRIVGIQNEEYQARVIQTIQNQIDSLGAKRLNVRSLKNITTLTRSPN YLKLVAAIDMFYFHFKNSQERAVVRVATLGSRHKDCAALSTLNHIVQFTGKPLIEVLDWVFTDQVAQEVSRMMRPGQEIDQADSYMPYLKDLGLCRKSPYSSSANPGVHCWAQMTCALLGSKRSQNAIASTEENLVNLTRNAEIMAYVLGTGAVLVKALEIGGVKGTDPDDITVDVDGAGEPTTLEALDW LDFVQTNGCQLTPKMEAKIRVMSLRIQNARKDTIGAYLKGRAVQNE
Molecular weight: 47.39 kDa
Isoelectric point according different methods: Bjellqvist 5.130 DTASelect 5.258 Dawson 4.965 EMBOSS 4.876 Grimsley 4.800 IPC_peptide 4.978
IPC_protein 5.003 Lehninger 4.927 Nozaki 5.080 Patrickios 4.037 ProMoST 5.067 Rodwell 4.876
Sillero 5.143 Solomon 4.965 Thurlkill 4.889 Toseland 4.889 Wikipedia 4.851 Avg_pI 4.981 Protein with the highest isoelectric point: >tr|K7X6R3|K7X6R3_PRVF Matrix protein
MALNIFKKKGKSNKEMDSGKALAMPSAPPVYSEAPGPFDAWNTSSIEELSKVSYLVDTCLSVTTKGPLQSVADAYMVAQGMMDYYNGPVLSKPFFMTLFLGGVHGMQASVRGSQSIRYEREFHGPMTFPYHKSNPVDWTPKSVSVHYTSSLRGKAVEVVFEARLKSTRQMGPSVWHYLDGLKGIQRPGNE AVLKQFGVPTMMLGNNLVFNLDVQMSDL
Molecular weight: 24.08 kDa
Isoelectric point according different methods: Bjellqvist 9.063 DTASelect 9.033 Dawson 9.311 EMBOSS 9.443 Grimsley 9.385 IPC_peptide 9.399
IPC_protein 8.434 Lehninger 9.370 Nozaki 9.077 Patrickios 4.533 ProMoST 8.829 Rodwell 9.487
Sillero 9.268 Solomon 9.414 Thurlkill 9.136 Toseland 9.019 Wikipedia 9.487 Avg_pI 9.197
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
5
0
5
3,579
218
2,097
715.8
81.1 kDa
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
5.39
1.37
5.64
6.9
4.14
6.31
2.43
6.17
6.57
9.5
2.82
4.58
3.69
4.81
5.22
7.91
5.73
5.87
2.01
2.93
Note: For statistics only major isoforms were used (in this case 5 proteins)
For dipeptide frequency statistics click
here