Tobacco vein clearing virus (isolate Nicotiana edwardsonii/United States/Lockhart/2000) (TVCV)
Taxonomy:
Average proteome isoelectric point is 7.25
Get precalculated fractions of proteins
Acidic |
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pI < 6.8 |
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6.8-7.4 |
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pI > 7.4 |
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Basic |
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All |
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Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC_method)
Get csv file with sequences according given criteria:
* You can choose from 18 different methods for calculating isoelectric point
Protein with the lowest isoelectric point:>tr|Q9QD06|Q9QD06_TVCVL Putative coat protein
MNKEEFAIDEKTYENQDGLKIKIIFSNLGRRYKKIGDQIYLMIEKETARLEDSLTAMTRIIKENEEIDKKREIEIIRNQANKEIQQLEETKNTKIIALEKELNMLKLLYENKQREKDKEIELTDEINKFKQKLQPEENLRIEEIDNNIDDQKSELSEISETYTEILENIEKTKNLEINTGDVNMDEKPST
SGIKNPKELNPSYYTVSYEQSDRNNTLWNSRLNKKWTPKPIHEQYNFLDLDCVEDINKTIQLWIGYISKQLIDNKIGITETPGYIERTLIGTVKLWLHNLTKESIDTLRSNKKFNGDMATTSMEILYKYEIAIRNEFSSMTTETEEQHKEKQINRNLMTKLAICNMCYIDEYTCAFREYYYKGTYNTEEG
REIRKLYFTKLPEPFSSKIIKDWNEAGLTDTLGARIKFLQQWFVQLCEKYKEEIKMEKILIKNLKCCKNKTAPQFGCTDKYNKKWKTKKYKKHRSKYKYKKPRKRYYVKNYQAKKPFRPKKKLTECTCYNCGKLGHIAKDCKAPKNPKKKQITEIIIDDEEYMQMEYIDYELDSEDSIYEISDSDDEIDS
EITEEEDEI
Molecular weight: 69.08 kDa
Isoelectric point according different methods:
Protein with the highest isoelectric point:>tr|Q9QD04|Q9QD04_TVCVL Polyprotein
MKIYILAKIIVEGYYNRYYTPMIDTGAEANICKYNCLPTDKWEKLKTPMVVTGFNNEGSMINYKARNVKIQIWDKILTIEEIYNFEFTTKDMLLGMPFLEKLYPHIITKTHWWFTTPCKNKVGAKRVNNKQRKTTEWIRGSEKITQKLENINKNTTTQLEIIIFTIDKVKIIQKKLEKLYNDNPLQGWEK
HKTKVKIELIEENSIITQKPLKYNFNDLTEFKIHIKDLLDNKYIQESNSKHTSPAFIVNKHSEQKRGKSRMVIDYRNLNAKTKTYNYPIPNKILKIRQIQGYNYFSKFDCKSGFYHLKLEDESKKLTAFTVPQGFYEWNVLPFGYKNAPGRYQHFMDNYFNQLENCIVYIDDILLYSRTQDEHIKLLEKF
AHIIENSGISLSKTKAEIMKNQIEFLGIQIDKNGIKMQTHIVQKIINLDENIDTKKKLQSFLGIVNQVREYIPKLAENLKPLQKKLKKDVEYSFDEKDKEQIKKIKILCKKLPKLYFPDENKKFTYIVETDSSNYSYGGVLKYRYNKEKIEHHCRYYSGSYTEPQEKWEINRKELFALYKCLLAFEPYIV
YTRFIVRTDNTQVKWWITRKVQDSVTTKEIRRLVLNILNFTFTIEIINTNKNVVADYLSRQSYPN
Molecular weight: 75.69 kDa
Isoelectric point according different methods:
General Statistics
Number of major isoforms |
Number of additional isoforms |
Number of all proteins |
Number of amino acids |
Min. Seq. Length |
Max. Seq. Length |
Avg. Seq. Length |
Avg. Mol. Weight |
4 |
0 |
4 |
2,050 |
417 |
635 |
512.5 |
60.6 kDa |
Amino acid frequency
Ala |
Cys |
Asp |
Glu |
Phe |
Gly |
His |
Ile |
Lys |
Leu |
Met |
Asn |
Gln |
Pro |
Arg |
Ser |
Thr |
Val |
Trp |
Tyr |
3.02 |
1.46 |
4.44 |
9.9 |
2.93 |
3.07 |
1.56 |
11.61 |
12.15 |
7.66 |
1.8 |
7.32 |
4.39 |
3.37 |
3.8 |
4.68 |
7.02 |
3.07 |
1.07 |
5.66 |
Note: For statistics only major isoforms were used (in this case 4 proteins)
For dipeptide frequency statistics click
here