Pedobacter sp. BAL39

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter

Average proteome isoelectric point is 6.83

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All


Virtual 2D-PAGE plot for 5,097 proteins (isoelectric point calculated using IPC_method)

Get csv file with sequences according given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 18 different methods for calculating isoelectric point

Protein with the lowest isoelectric point:
>tr|A6E7S5|A6E7S5_9SPHI Uncharacterized protein
MENNQENQLQEEEIPTLEQFQVGRNAEADDNQEEGGETAGYTSDEVEFADGEGTQLDDEIDGPEDDDDFSDDDDLSDDDDDDALVAGEDEAGTSEDDDDADFENPAPEDDPA
Molecular weight: 12.21 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A6ECY1|A6ECY1_9SPHI 50S ribosomal protein L34
MKRTFQPSQRKRRNKHGFRERMATANGRRVLASRRAKGRKKLSVSDERRHKA
Molecular weight: 6.23 kDa
Isoelectric point according different methods:






General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5,055

42

5,097

1,733,762

20

7,799

343.0

38.4 kDa

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

7.65

0.72

5.41

5.75

4.86

6.95

1.84

6.94

6.66

9.62

2.44

5.44

3.84

3.75

4.18

6.62

5.73

6.36

1.14

4.1

Note: For statistics only major isoforms were used (in this case 5,055 proteins)
For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI: proteome isoelectric point database. Nucleic Acids Res. 2016. doi: 10.1093/nar/gkw978       Contact: Lukasz P. Kozlowski