Infectious hypodermal and hematopoietic necrosis virus (IHHNV) (Decapod penstyldensovirus 1)
Average proteome isoelectric point is 6.23
Get precalculated fractions of proteins
Acidic |
|
pI < 6.8 |
|
6.8-7.4 |
|
pI > 7.4 |
|
Basic |
|
All |
|
Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC_method)
Get csv file with sequences according given criteria:
* You can choose from 18 different methods for calculating isoelectric point
Protein with the lowest isoelectric point:>tr|Q9IBP6|Q9IBP6_IHHNV Non-structural protein
MAKDILHTRQGEPESLSELLRERTNETHSSQGISPSLLTPGPNQDPKPTTEQLLNMSEELFQFSDEEDNSQTPPRTSTPEQTDPKVCVDNLGIREGTGNGTIQLGSESETSLGSVGNSNDRGKKRQRGITYISDTSDSSGSDDENLGTPHRNKRTRNSNTTKETGGGDNRRHQESDHGSNGNRLEPTDGG
ESCSSGTQPDFIEGTPNGPDEMDGRRLEESEIDKQVESTTWYTFVIREKPQPRRLSGRTPNFTITDHGDHWHITYSGHPTNKTRHRATILAYLGVTFAARAEAEATTVLVRNIKRWILYLIRYGIERLSYFGLGHAIFKRIIKYFQQYRRDEDAVDGPCPYMTTTREDRAEEKPKENSAEYDYLQHLVKT
KSARTVQELVNKLDDEEYKQLWTRTRGQYKDKLRGILTYYNNKKKSNQSQLSLITNLQNISKRKPDYDNMQWIKYMLANNDIRVPEILAWIIIVADKKLDKINTLVLQGPTGTGKSLTIGALLGKLNTGLVTRTGDSNTFHLQNLIGKSYALFEEPRISQITVDDFKLLFEGSDLEVNIKHQESEIMGRI
PIFISTNKDIDYWVPPADGKALQTRTKTFHLTRQIKGLSDRMNSQYDINPPPDKITSDDFLGLFQEYEKEIDDIIDNHVRRFNKSKPKEKIQEGCT
Molecular weight: 75.77 kDa
Isoelectric point according different methods:
Protein with the highest isoelectric point:>tr|Q9IBP5|Q9IBP5_IHHNV 37 kDa coat protein
MCADSTRASPRKRSRRDAHNEDEEHAEGSSGPDPHRCLQFNTGDSIHITFQTRRYFEFDAANDGNFDGKNLYCLPLHWMNLYLYGLKSSDSSATETQRYKMVKSMMKTYGWKVHKAGVVMHSMVPLMKDLKVSGGTSFETLTFTDTPYLEIFKDTTGLHNQLSTKEADVTLAKWIQNPQLVTVQSTAANY
EDPIQQFGFMEQMRTGDRKAYTIHGDTRNWYGGEIPTTGPTFIPKWGGQLKWDKPSLGNLVYPADHHTNDWQQIFMRMSPIKGPNGDELKLGCRVQADFFLHLEVRLPPQGCVASLGMLQYLHAPCTGQLNKCYIMHTN
Molecular weight: 37.42 kDa
Isoelectric point according different methods:
General Statistics
Number of major isoforms |
Number of additional isoforms |
Number of all proteins |
Number of amino acids |
Min. Seq. Length |
Max. Seq. Length |
Avg. Seq. Length |
Avg. Mol. Weight |
3 |
0 |
3 |
1,358 |
329 |
666 |
452.7 |
51.8 kDa |
Amino acid frequency
Ala |
Cys |
Asp |
Glu |
Phe |
Gly |
His |
Ile |
Lys |
Leu |
Met |
Asn |
Gln |
Pro |
Arg |
Ser |
Thr |
Val |
Trp |
Tyr |
3.53 |
1.1 |
6.11 |
7.22 |
3.02 |
6.11 |
2.95 |
5.82 |
6.48 |
8.69 |
2.14 |
5.67 |
5.3 |
5.74 |
6.04 |
6.48 |
9.35 |
3.76 |
1.69 |
2.8 |
Note: For statistics only major isoforms were used (in this case 3 proteins)
For dipeptide frequency statistics click
here