Cocksfoot mottle virus (isolate Dactylis glomerata/Norway/CfMV-NO/1995) (CfMV)
Average proteome isoelectric point is 7.53
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC_method)
Get csv file with sequences according given criteria:
* You can choose from 18 different methods for calculating isoelectric point
Protein with the lowest isoelectric point: >sp|Q0PW25|RDRP_CFMVN Replicase polyprotein P2AB
MGCSVVGNCKSVMLMSRMSWSKLALLISVAMAAAMTDSPPTLICMGILVSVVLNWIVCAVCEEASELILGVSLETTRPSPARVIGEPVFDPRYGYVAPAIYDGKSFDVILPISALSSASTRKETVEMAVENSRLQPLESSQTPKSLVALYSQDLLSGWGSRIKGPDGQEYLLTALHVWETNISHLCKDGK KVPISGCPIVASSADSDLDFVLVSVPKNAWSVLGVGVARLELLKRRTVVTVYGGLDSKTTYCATGVAELENPFRIVTKVTTTGGWSGSPLYHKDAIVGLHLGARPSAGVNRACNVAMAFRVVRKFVTVENSELYPDQSSGPARELDAETYTERLEQGIAFTEYNISGITVKTSDREWTTAEALRVARYKP LGGGKAWGDSDDEDTQETAIRPLNLPAGGLPTGQSALGQLIEYAGYVWRDEGIINSNGMPFRSAGKSSCRFREAVCRAVHRDVRAAETEFPELKELAWPSRGSKAEIGSLLFQAGRFERVEAPANLQLAITNLQAQYPRSRPRSCFRREPWCREDFVAEIEKIAHSGEINLKASPGVPLAEIGVSNQQVI DVAWPLVCEAVVERLHALASVDPRQHDWSPEELVKRGLCDPVRLFVKQEPHSRQKIEQGRFRLISSVSLVDQLVERMLFGPQNTTEIALWHSNPSKPGMGLSKASQVALLWEDLARKHQTHPGAMADISGFDWSVQDWELWADVSMRIELGSFPALMAKAAISRFYCLMNATFQLTNGELLTQELPGLMK SGSYCTSSSNSRIRCLMAELIGSPWCIAMGDDSVEGWVDDAPRKYSALGHLCKEYEACPVLPNGDLKEVSFCSHLISKGRAELETWPKCLFRYLSGPHDVESLEMELSSSRRWGQIVRYLRRIGRVSGNDGEERSSNESPATTKTQGSAAAWGPPQEAWPVDGASLSTFEPSSSGWFHLEGW
Molecular weight: 103.35 kDa
Isoelectric point according different methods: Bjellqvist 5.817 DTASelect 6.135 Dawson 5.753 EMBOSS 6.033 Grimsley 5.842 IPC_peptide 5.779
IPC_protein 5.601 Lehninger 5.741 Nozaki 5.982 Patrickios 4.177 ProMoST 5.868 Rodwell 5.728
Sillero 6.071 Solomon 5.753 Thurlkill 6.071 Toseland 5.792 Wikipedia 5.715 Avg_pI 5.855 Protein with the highest isoelectric point: >sp|Q66012|CAPSD_CFMVN Capsid protein
MMVRKGAATKAPQQPKPKAQQQPGGRRRRRGRSMEPVSRPLNPPAAVGSTLKAGRGRTAGVSDWFDTGMITSYLGGFQRTAGTTDSQVFIVSPAALDRVGTIAKAYALWRPKHWEIVYLPRCSTQTDGSIEMGFLLDYADSVPTNTRTMASSTSFTTSNVWGGGDGSSLLHTSVKSMGNAVTSALPCDEF SNKWFKLSWSTPEESENAHLTDTYVPARFVVRSDFPVVTADQPGHLWLRSRILLKGSVSPSTNL
Molecular weight: 27.61 kDa
Isoelectric point according different methods: Bjellqvist 9.999 DTASelect 9.984 Dawson 10.335 EMBOSS 10.570 Grimsley 10.394 IPC_peptide 10.379
IPC_protein 9.487 Lehninger 10.350 Nozaki 10.175 Patrickios 10.365 ProMoST 9.809 Rodwell 10.687
Sillero 10.248 Solomon 10.379 Thurlkill 10.204 Toseland 10.175 Wikipedia 10.496 Avg_pI 10.229
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
4
0
4
1,872
108
942
468.0
51.0 kDa
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
8.01
2.4
4.27
6.25
2.67
7.53
1.39
3.95
4.59
8.81
2.03
2.56
2.94
6.14
6.52
11.27
6.09
7.96
2.35
2.24
Note: For statistics only major isoforms were used (in this case 4 proteins)
For dipeptide frequency statistics click
here