Rhizosolenia setigera RNA virus 01 (isolate RsRNAV06) (RsetRNAV01) (Rhizosolenia setigera RNA virus)
Taxonomy:
Average proteome isoelectric point is 5.5
Get precalculated fractions of proteins
Acidic |
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pI < 6.8 |
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6.8-7.4 |
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pI > 7.4 |
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Basic |
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All |
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Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC_method)
Get csv file with sequences according given criteria:
* You can choose from 18 different methods for calculating isoelectric point
Protein with the lowest isoelectric point:>tr|Q2HWK2|Q2HWK2_RSET1 Capsid proteins
MRFQKLNYDFETAVMLNRVYNTLRNGLQDNSPHSAIELALNKLIVMGILQGISHIDLEQDNYDDSDSLETLYSQSGDIILEDEPFISSHMRFRLANTNAKRRDDIKKTLVKRFRRQKAFSKQFDTHFSSQSGKSEIKDISHDVSVNVGFNSEVPITHTEIKSAFDPLRSDGWDSKLELTSFLRRPVRIYE
KTWTVGSFLRDDFFPWDAYLNTASIRRKLENYLYLRGSLKLQIFINGTQFHYGKGIVAYTPFGAAQHPFRTPGSAPVLDNVQYSQKPHVLLDPTDNVGGEMTLPFVFPHNWVRHTIQSDLQQLGQIDLSSFNKLGHSLGDVTSPVRIAIFAYMDDDVALSGSTQFSSQSGKQDEYGEGVLSKPASAVARL
AGRLKDVPIIGTYARATEIGAGAVGKIASLFGYCRPLNLDPITKFRPNYLGNVANTSIEEAADKLTFDPKQELSIDPKIIGISDNTDQLSVPYIAQKWSYLTRTPWSASDAADSHLFSMVVNPGMYGTQTISTIDEVMLTPMAFASLPFRYWRGSIKVRVQVAASKFHKGRLRLTYDPNGPNSTLEWGGG
YHEIMDISEKRDMEFTIHWNQDRQFLEIRNPMLTANPSPVYDPADGGTPGVNPIAVDLDNDNGVFEIRVLNELVRPSEDDTDTPDINIFVAAGDDFEVMMPYCRNLENISYVSQSGLTEATPSDSAPSGSGEIDTIDIAGGSYETDVASLTYAGETFQSFRNMLKRYHYHTSYINPYEGTAVGLSWVWNF
AHPRFPTYKGNDVSNPFSSENEVWAKTTLMNYLTPAFAARRGGIRWKYNFNSNVLNQAPCGRMSVCRWFGGVPTDTQSSIIKLNDGSANNAVSTARSVYYSNITGDGASLTTTLACPTLEIESPYYRSVRYEPTYQSGLIFSDIDDESLALQVMLTSAGGVSSPNEGSYTVDAYVAAGEDFTLDWFVAVP
TMYYHDPTPT
Molecular weight: 107.12 kDa
Isoelectric point according different methods:
Protein with the highest isoelectric point:>tr|Q2HWK3|Q2HWK3_RSET1 Genome polyprotein
MNQNCDMKGYKFSATEKYAKKMISLKIKREKEQFNQRYLKYSRKAMLAQFESQAGFTKLTEKGLDRLAIAWRNACMKTTERGFEQVLNYGENVILYLLSLKDCKTYSQFIAITTMYVKLHCPDQALTAKIVDMISLEDFKFFSDEEKKPQSTENIFQDFEDTNLDEFDFSSQSSLIADFLQGVNTARNSV
VASKVSSAIATLLALGFVSETKELSMSIKGLNLFRISAAKGQKTMIDLVEILLSTMQFICERGYKCFQTGSVEPFLYDDDTAMEFQEDYIRIVTNFEFVKLGTYKGQNKSCPWASENDFERDLEGVISKCREICSSASNYDRILMFKHLERLLKVKTDFELVRTSGGLREAPFAFCVFGKSGIGKSTIVN
NLMSFALQTDARVRGVKDYTVDPNSICTLNELDKYHSDYKSHIEAVLLDDFANAKGSTTQVNPTVNVINFINNVARTAIMAEADLKGKIQIKPKVVAATTNVKELEAKYYSNEPVSILRRFPLHIEARVRPEYLKEAEGAFIDGKKLAEEAEAGNLFPDAWEFDCYEYFDPSVGQNGNNCLDRPLTFVQD
GIEQAAMHIGVKELLVLMQSMIKNHVMIQKSVVSSSKAIFDKTLCHECGMHSEYCTCHDLDDVPDLDEFDSQAGFNFSNFYEEYVEASLFRWENYIPNPLFITNKTQWFLTWLNSKKFFSESMKVNAFVILITIIGWPAWILYTLSLQCAVSAAALRARKDYVISKLLQSRELVPRIIQNIRDMDRETGK
KIFFFASAVFAIYAAYKLYKHLSSATMDEQGNGMSVHMETNNVWLEPTLEDLPKSEEGYSNTAVESLERAVTKQLVHVELGERFSNGLFVGANMLLLPGHEMPKVVTQMKIRRDGIGKSSGLNFDCQINPEDCVMLENSDICLAYIPRAGDRKDLIPFFPESLTTHKSITKVLNRTPEGEIMTDFTRIAE
FKRVNTDKTSFYGGLVKYSRPTFGGMCMSPHLYNGRQSFIAGFHAAGVGNTPVGAITRCTRSDIRKAKEILASRSTCVFAMHSGDMITQSYGKDFTPRAEIEPRSPMNFQEDVQVSHFGTMPEGKVRPKSSVIISPCSEIITEITGNVRIHGKPANCRKPGRDEGNSIRDWAPYQKYLAGAGNAFQEFPA
DVLAWAYDDYISGIDELVKTNTGKSLLAKVRILDDIETVSGIDGMKFVDAMKPTTSMGWPVNKAKTTFLTDLVYDPEEHKTTVCPRVLDDETLALARKARLAWLDDKRSYDIFKTCTKDEPTKITKDKVRCFQASPVSLQFNIRKYFLTLCHFLSSASLVSECAVGINSQGRGWHELNQHMIKYGKNRIV
AGDFKAYDQHMSARMTLMAAKVFEYIAGLAGYTEEELKIMRGASTEVSYPVMSLNGELIQLYGSNPSGQNLTVYTNSIVNSLYHRCAFRKIYPNFSGRYRDAVALMTYGDDVKMSVSPKFPDYNHTRIQSEFNKQGIEYTMAEKEAASVPFIQHEDADFLKRKSRWEPSYSYTEGDGTINKGMWLAMLDE
ESIFKSLHANLASKVKSPEEVSVQCIEGALREWWFYGEETFNFRHAQMKEVVSRLGWTNFMSTQFWDTYSARESRWLEQNEVTIM
Molecular weight: 182.09 kDa
Isoelectric point according different methods:
General Statistics
Number of major isoforms |
Number of additional isoforms |
Number of all proteins |
Number of amino acids |
Min. Seq. Length |
Max. Seq. Length |
Avg. Seq. Length |
Avg. Mol. Weight |
2 |
0 |
2 |
2,565 |
960 |
1,605 |
1282.5 |
144.6 kDa |
Amino acid frequency
Ala |
Cys |
Asp |
Glu |
Phe |
Gly |
His |
Ile |
Lys |
Leu |
Met |
Asn |
Gln |
Pro |
Arg |
Ser |
Thr |
Val |
Trp |
Tyr |
6.94 |
1.48 |
6.2 |
6.16 |
5.3 |
6.04 |
1.95 |
5.93 |
5.89 |
7.76 |
2.81 |
5.03 |
3.39 |
4.25 |
4.87 |
8.23 |
6.32 |
6.0 |
1.4 |
4.05 |
Note: For statistics only major isoforms were used (in this case 2 proteins)
For dipeptide frequency statistics click
here