Lettuce big-vein associated virus (isolate Japan/Kagawa) (LBVaV)
Average proteome isoelectric point is 6.25
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC_method)
Get csv file with sequences according given criteria:
* You can choose from 18 different methods for calculating isoelectric point
Protein with the lowest isoelectric point: >sp|Q68Y29|VP4_LBVAV Protein 4
MDEENVDITEDELSVISDLELDSITRVVGTNEIKTYEDYKLEEANYLKVLDIIKKFSTSDTCECYRCELFERGDIGKFLTRSEFSKLAVLYWERCGRPRNSEALEAFIGRHICIRCAASILLSHHPVIAMRADMRLREIYIENGDKPASSSGTLFSAKGKGPRI
Molecular weight: 18.69 kDa
Isoelectric point according different methods: Bjellqvist 5.207 DTASelect 5.308 Dawson 5.067 EMBOSS 4.965 Grimsley 4.940 IPC_peptide 5.080
IPC_protein 5.092 Lehninger 5.029 Nozaki 5.194 Patrickios 4.024 ProMoST 5.219 Rodwell 4.991
Sillero 5.270 Solomon 5.067 Thurlkill 5.029 Toseland 5.029 Wikipedia 4.927 Avg_pI 5.088 Protein with the highest isoelectric point: >sp|Q8B0U2|L_LBVAV RNA-directed RNA polymerase L
MSLASRMTSVGGADNYGESDYGWDETVLGDMHLNSAINLDLFKEFLHIDPPVYKVKENHRLTEELRELQSLARKGSKIEIGFQRLFARMFPRDGNLIPMDSTMTRMIMKIIRDSGTKYKLGIPLLGISEEMIKKGAMVPSNLVYSFNCFLNIIYGRSEWIRSEGIAIRFKMYEHGRFIRRDLTISEKEYN FIVGKEVVEIRASRRKERFIADYNSLLLLLDVAGQRICAHLCSQLGEISGVPGSLSRYHLETLCTAGDRMIERCGNKAYEVLGMYEALCVGRLLENNPDGITDHTQFSANCEEELQELIAGSVEPAFMKSQVDLIKTTLEKMKNQDISNAFCLYRVWGHPTVDIYEGMKKVHTIGTKVKVIPPNLGTIMV CQFRKMFMSTFFKKHHRYPPITGTPGEYLERCLKDNVAIRIEHLAYNLRDFEFIRIGETYSVPDTFDMCHVLNDKAVSPDMSELLESIKNGKGTSCGAKRRGMLRWMEGDSLNCKSFLSDIDEKGLSEEDLLIGMYEKEREIKVAARMYSLMTERMRYYFVLTEGLIADYILPHFPEITMKDSLNVLLKK MWESGGQRSIGSMDVNINIDFSKWNTNMREGPTSDTFREMDGIFGFKRLIARTHEIFNASLVYSASGKYLPTIEDGRILDDPPMCYRGHLGGFEGLRQKGWTVATVCLLAYLSEQNKIQMKLMGQGDNQIIRLRMPTSYWDSLRLTEEMKKKEARILSDKFVHEMDIIFTGVGLPIKVRETWKSTRLFMY GKVMLLDGRQLPQWYKKTLRSYALSNEGTLTISGVIGTIATNMCAAGGGSEVPCVMYLFFLLLAEWSLEFMFRYHPFTRVGIKDGSSMEFRLNEKGGYVHKQTRKTNNLWLKSLLVLVPTAVGGSVTIPLTGFIMRGFPDKASEGYAWLKFLGSSKSPIQGFLKNFYTFLPNDTVEADMLVQSPFSLNHK RPPTPGLQTKENIREWLLSTPRFQQNRFIRSMQVLLSGFDKKSVCRELLTERMNPLISHEVYETFGHVYCEGIVARVENTRTIRTLHLSREDRKPIVAKLMTDEMAYIAYMWWRGNTKGEVFEECATKQARKGRNVGWKREIMGITTPHPLEVLFQSVCRPGDQCQRSDDYITSKLVDDGKFPPFLGSKI KNKVYSLQDEEARREPLIKTGARLARQFNWIGMGENMRGLVLKNVGSICDVSVFDKFVDDDPSDNLYTGSLMHRFTPSSVSEGCFINYAPQVGHKVFMSSDTLPSLSRGQTNYTFHFQAMYCFLQYSISKSGNEGSYHHHIMCQDCVVPVEDEFDDIPNETPSIVKAQEEQYVSIIRTTLGYIHTKPRSA MVLEDKSPIGRYIEDVEGHEKELYSGVVELLCWKSALEILGRTRDTHATVGTEDLQGWPRIYAYKVSRRHIIGKVTSFILYILAVQIGELPLPYSMERVSRRAIDVVSRVGLEGFSAVASLCLGRDIPMVNDVVTIVDGFAYPETVSVCLRSIKASILMTIGKVIRVDGFMSRRSVYPTESMTSDDFLRI LGFKAVIFYGCTKIHEKCQLKGLDQVTYAEMMCHHRCLEKLLSSNLLTHMTMDRAMKYLPIKITKILPKISSTRPNTIAVTREVETENREFSDTFPIDERVTYPEMDLKTNQMIQYPTSSIYKWSDILLGIEHYDHVVVMGDGTGGTSMVAAHMFPNSTIYPMALLESKNLIPQDMESLAPPMSRKLTNV DSSLLIDLPDDIRKPTFRTRMLERVSLMRGNILIISDIEGTGTLFRDIVSTCLYMPTSTDVLMKTHLADLCGSYYMMKGAGRIRLRGSRLANLRYGEVFVSFRVTGGNIRPNRRGLGNCIQEVMIGLMNTQIETATGMLSQIESMFPLAADMSMNIAMMKMASWGGSFSRKVLGEDGLKLMGYVYQYINT HYHFASSSYRPGDNRTVTPRRKEDLTKLLCSIMLGVYGEDTETIEEVSKYTLIGSKKGVPGKSYFKVLMWKTGTKRALEHDEYMVGRAIRNYRTRILEAKKLDGPIGLPFHSGSLRKIATWGYKIPISASGGWIDNHLQI
Molecular weight: 232.11 kDa
Isoelectric point according different methods: Bjellqvist 8.668 DTASelect 8.404 Dawson 8.317 EMBOSS 8.521 Grimsley 7.322 IPC_peptide 8.331
IPC_protein 7.556 Lehninger 8.346 Nozaki 8.814 Patrickios 4.355 ProMoST 8.185 Rodwell 8.361
Sillero 8.770 Solomon 8.346 Thurlkill 8.463 Toseland 7.249 Wikipedia 8.258 Avg_pI 8.244
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
6
0
6
3,592
164
2,040
598.7
67.5 kDa
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
5.68
1.64
5.43
6.71
3.87
7.02
2.31
6.88
6.29
8.96
3.95
3.45
2.45
4.26
5.99
8.02
6.15
6.15
1.25
3.54
Note: For statistics only major isoforms were used (in this case 6 proteins)
For dipeptide frequency statistics click
here