Proteome-pI - Proteome Isoelectric Point Database statistics

Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7)

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga

Average proteome isoelectric point is 6.27

Get precalculated fractions of proteins

Acidic

pI < 6.8

6.8-7.4

pI > 7.4

Basic

All

Virtual 2D-PAGE plot for 2,689 proteins (isoelectric point calculated using IPC_method)

Get csv file with sequences according given criteria:

* You can choose from 18 different methods for calculating isoelectric point

Protein with the lowest isoelectric point:

>tr|I1YKK6|I1YKK6_METFJ RTX toxins-related Ca2+-binding protein 

MATVIGTVSVLVGSATATALDGTIRNLQVGDKIYQHELITTGAAGAIEIAFLDGSQLDMGRSSQMLLDLDVFNPDAPVTETAETVIDDDVAAIQQALLDGEDPSLLAEATAAGAGTGVDGSEGSTVLVFRNYLNPEVTPTNGFETIGVFNEFDAPPEDINLLEDDVTPEPTPEPTPEPTPEPTPEPTPEP
TPEPTPEPTPEPTPEPTPEPTPEPTPEPTPEPTPEPTPEPTPEPTPEPTPEPTPEPEFDPPAGQPVRLEVQEDEITDTATTTVTFTPGDGALDGFGMTLSPATTVNVDGLPGPELDWRIESGQIIGALDGTDVIVVSLSNPNFGAGTVDVNVQLLGPLPHPDPDNTDGLSDSVITITGIGVFTSDTNGLL
GHAQVTVDVIDDVPSVAEQVEPVRAMVEEDGMSLATGDNSEGNKAASGDSNSDDEVSGVAGTLSALFDSGADAPLTISLSDDTSALPTLYSNGTAITYSVSPDGTTLTAMAGPVTVFTLTVNADGSYEFDLQAQLDHVDDGNNDENIALQTSAPGVEPVTSVNGIDFSSVLTATDADGDSVTGAGSQLFV
IAVEDDVPVVTVQGVNFFSESFEGFSTQGSGFDVVGLGGGNVSGDAGHIWTVNEAGIEIQFGNTGGASPSDGNVHAELDADPNGNSLVQISTEVMLPTSDITLSFDYQPRPSSQDDSDMLVSLGGVEVTILSDSAGNVSFAGLPAGVEGSLTSVSGGWTNVVLKFTGMDTSSPQTLLFEGLGNADTLGAY
LDNINLYGNSLLVVDESGLPGGNPESGDVVSASATLDLSGYFLGSVGADIEGTEEFSLTLAESEEPIGSGLFAVDSNDTQFAGDDGDGYGQGEEIELVQVDSTTIAGMLDGNTYFTISVDPATGVVTLTQEDNVWHPNVNDADEAVSLILDAGTIEINYSLTDADGDTATGSLDLSQGVFGFEDDAPVAN
LDPEAAVIATVEEDGMSLATSDNSEGNKATVDDSNDDDEVTGEAGALTALFSAGADAPVTISLSDDVSGLPSLYSNGNAVSYSVVGNVLTATADGVDVFTLTVNADGSYAFDLLDQLDHVDDDTNTENFALVTDDGSVNGIDFSSILVATDSDGDAVTGAGEGQFVINVQDDIPVVEATTDLAVNFFSES
FEGFAPNLSGNGFTVVGVGGGTVSGDAGIVWNVNGAGLEIQSGNAGDASASDGDVHAELDTDNNETLLTQLSTDVELPSADVILSFDYQPRPNHEDDSDMSVSFGEYSFNVNSDAGGNVTVEGLPVGVTAELTEVAGGWTTITLTFTGMDTTSPQTLTFEGLGDANEFGAYLDNINMFALPVLAVDESGL
ENGNPETGAVSSATASFDFSGYFTSSVGADEDGTTAYSLSLSGENIVTGLYAVDTTDTSTADTDGYGQGAEIVLNEVGGAIVGSADGVDYFTISVDSNGVVTLELLQNIWHDDTTDSDEAMSMLLEAGTLLLSKSVTDADGDTVSADLDLSGIAYRIEDDAPIVNEQAEAVTASVEEDGMSFLTLDNSEG
NKEAGDTNDDDEVSGLTGSLSALFSAGADAPVTISLSDDVSGLPSLYSNGNAVSYSVSGNVLTASAGGLTVFTLTVNADGSYVFDLQDQLDHVDDDTNTENVELVTDGGSVSGIDFSSILVATDSDGDTVTGAGEGQFAIEIQDDIPVMTNNGVITIKHDESGEAQNEDPQFTLSGANITASDLISLLGL
DLPSLGLFDLDPNGDGVEIATELLGDGNLFGLSVQTNTSAVQYSGGADGINLVSLTDAEGNVFDGTDTGLQTSNGDQPIYLYTLDASIFSTLQGILSGFGINISNSEFGQVGAKVVVGLTNDGGLDQYGSIADMLQDAAFVLGLKPGDNGDGSDDALLLLQLKAIEHADTESNSEQAVLDLIHFSVTDND
GDTVTSDSGIQVVFEDDGPSIEVGKVDQAGKQLEVTLDETVGDDRAAAGEVVNGNTDDATGVLAQVNTQVVGGLTALFTISGAAGADTPVVDTGVLSLELSDEGLATNLSATDGGAISLFTNGGNIEGRDTDGDVVFSISIVDIAGVPQLQTTLFEAIAHGDTSTFDEALGLLTESGNLKLRYEVTRTDA
DGDTDTAAANIVLANQNRSRITFEDDGPSMTVEQPEQPLLLTVTNEGGSAGYNNTFGYYIMNGDGEPVSGQIIWANVQGNLSDEITINADPATVGYFIIPDGNDLNSGLANGAEVTFAKDGEGNWQVLLDGTPLSGELTNVRFDNPALNEDGATAVQDNAEPGNLNWEDKHSGSDNDFNDININVVVTPL
GLLTVDETDIGSPDAAQVLDLSGSFAFDFGSDGEGSVAYDLEVGSASTGVFDTETGLEVALRSGVGGIIEGFVNDGSGDQIVFTVSVDGDGEVTLTQLRAVIHDDPTDADEATSPVVINSGALYLNATVTDGDGDMLSDGIDLGSLLAFEDDGPVAVDDVDTVVDGVATGNVVTAVDTTTDPAGVDDFGS
DGAGRVTSVSFGDTVVLIPEDGSAEVEGEFGTLTLNADGSYSYEVDPSKLPENTETVEGWTNTGSNMTAFELDESFLTADGKFSDTGTGAITTGGNAPGFGVGGTSGQNTSVPDQINYSDSLSEALAFKFDGPVLSASVQFSNLFQNENGGEAMRWHAFDADGNRIGSGIVSNNDDANDPYASSTPFAMD
DNNVGSFTIGNIGAFNTLVFESVPYSDDGNAAADNSDYFVNISEYESFALGDNSYQDQFGYSIVDADGDSAAATLTINGEAGVPQGELTPFSPVAADNTYQVDGVTTGNIITDDDNNGGAQTGRDYDNDTPVLNLSIHSVIFDDGDDNTDDVTLIEADGTVIELNNGTLVINLDGSYSYTPNQGANEGDV
FDYTLIDPDGEISAPATVTLLAENDEPTGGEANAVVDDEGLVPDGIEGGLGDEVMLPDADSNEATFIGTLGFDYGDDTPGTIDFAAMHEQTATIGQETVEFAWDANSATLTAAGPRGNLFTVEITDQTTGAYQVTLLDNVMHDTLDGLQGDDTENNHQVALTYTVNDSNGDDVTGTLTIDFDDDMPAAQS
DSESITVSVSDISVGNLTSAFSNIDGGNDTALVDGTGGALDEVSWGNPNGSNYQFDDNDALITNSPIVVNDDFALGAFTHNNFVIDVSDSIDSVDLDVQFTVEIDGFDVVVNHTITFNHDETPNDSDDPRDTISIDGSSATQTISVGGKTYELQILGFSSGGVPVTEVITEENASTSFDLIAKIVSTDDL
PVVTGSVTGEFGADGPAEQGSLIWEGEVQGEIQGDFGTLEVESDGSYTYTLSREARDSQQVDTPRVETFTYITMDDDGDQVSNTLTINIDGEQAETVPDDEPTAGDSTATVDDEGLPGGIEGGPGDEVMSNADLDDNESTFAGTLNLTPSVDTPNSISFADMNDQLVNLGQETVLLSWSGANKTLTATST
TQGRGEIFKVTLDASNNGDYTVTLLQNVLHPDDGQNDENNVEIDLTYAIVDNDGDDATGTLTINFDDDVPTASSDYDSEDDAFVVDISEGNQATIDVDIDFGADGEAEENAVTFTQPTTGSVTYEDGEFTYTYDGESESGADSFTFSVTDADGDTITETVYLDVQVPVPDVLYVGTNSDNTKTTPAGNDV
LIGDLGGRDQQYTPGMDYSIALIADESGSMEGSRNTLLKNALESFVNDLATHDGEINIALIGFAESASLKISVSDLSNNPSGLSSLLTAIDNLDADDGTNYEAAFDSAVSWFNGQPGDHEFITYFMTDGNPTFSNNGDNGEGDETEYRDLLDAVEAFAGLSAVSEVNAIGIGNGINSDYLRFFDNTSTTG
NATENFGSTTNTVVLADFSGSNHPLDTTGDWTESGDSDGSIGRNDGVFRITDRRNDGSIVVTSQAFAVAVEDTILRFDYGTTSLESFDGDQISWSLQRQNGANWDTVSGSGLSQSSGSRVESSELDVGNYRLVYEVQAGWWENNETLYLDNIELREPVSLDVSGPVGEVKIINSAAELTAELESGSSTDE
LLLMGDDILTGSDGNDIIFGDTLYTGNMGAISGEDYQGVIDYLTAQNSGTAPTDEQIMQFVRDNYQDLYNEAPSAEEIAAAGENILEGRGGDDILIGGAAEDTYVFSMDEDTGDDTIVNFQPGTDVLNFKDVIADDDVNDVITGAANNGDDVTLTLKNGGSITLQGLGDGTTNNVADLETLLGGANITID
HS

Molecular weight: 433.48 kDa
Isoelectric point according different methods:

Protein with the highest isoelectric point:

>tr|I1YJ99|I1YJ99_METFJ 50S ribosomal protein L34 

MKRTFQPSNLKRKRTHGFRARMKTVGGRRVISARRAKGRARLSA

Molecular weight: 5.1 kDa
Isoelectric point according different methods:

General Statistics

Number of major isoforms	Number of additional isoforms	Number of all proteins	Number of amino acids	Min. Seq. Length	Max. Seq. Length	Avg. Seq. Length	Avg. Mol. Weight
2,676	13	2,689	831,413	37	4,182	310.7	34.4 kDa

Amino acid frequency

Ala	Cys	Asp	Glu	Phe	Gly	His	Ile	Lys	Leu	Met	Asn	Gln	Pro	Arg	Ser	Thr	Val	Trp	Tyr
9.6	0.9	5.9	5.81	3.82	6.92	2.34	6.04	4.09	10.76	2.54	3.8	5.27	4.3	5.5	6.09	5.54	6.7	1.33	2.77

Note: For statistics only major isoforms were used (in this case 2,676 proteins)
For dipeptide frequency statistics click here

See this proteome in:

Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI: proteome isoelectric point database. Nucleic Acids Res. 2016. doi: 10.1093/nar/gkw978

Contact: Lukasz P. Kozlowski