Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium thermocellum)

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium; Ruminiclostridium thermocellum

Average proteome isoelectric point is 6.46

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All


Virtual 2D-PAGE plot for 3,105 proteins (isoelectric point calculated using IPC_method)

Get csv file with sequences according given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 18 different methods for calculating isoelectric point
Protein with the lowest isoelectric point:
>tr|A3DBR6|A3DBR6_CLOTH UPF0473 protein Cthe_0154
MSEERDDLVVLIDENGEETEFEHLDTIEYNGNEYVVLLPVEQTEEENDAEEVVILRIEQGEDGEDSFVTVEDDEELDAVFEEFKMRMEEEFEFEEE
Molecular weight: 11.37 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|A3DHZ3|RL34_CLOTH 50S ribosomal protein L34
MLRTYQPKKRQRKKEHGFRKRMKTANGRKVLRRRRLKGRKVLSA
Molecular weight: 5.45 kDa
Isoelectric point according different methods:





General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3,084

21

3,105

1,025,914

30

6,885

332.7

37.5 kDa
Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

6.41

1.17

5.74

7.6

4.27

6.71

1.41

8.52

8.06

8.65

2.52

5.39

2.55

3.4

4.28

6.05

5.03

7.16

0.88

4.21
Note: For statistics only major isoforms were used (in this case 3,084 proteins)
For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI: proteome isoelectric point database. Nucleic Acids Res. 2016. doi: 10.1093/nar/gkw978       Contact: Lukasz P. Kozlowski