Proteome-pI - Proteome Isoelectric Point Database statistics

Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1)

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus; Amycolicicoccus subflavus

Average proteome isoelectric point is 6.3

Get precalculated fractions of proteins

Acidic

pI < 6.8

6.8-7.4

pI > 7.4

Basic

All

Virtual 2D-PAGE plot for 4,703 proteins (isoelectric point calculated using IPC_method)

Get csv file with sequences according given criteria:

* You can choose from 18 different methods for calculating isoelectric point

Protein with the lowest isoelectric point:

>tr|F6EJA3|F6EJA3_AMYSD Collagen alpha 2(I) chain 

MGPSTTGPTIVGPTTVGPTIVGPTIVSPGGGSGAGGGNVVFNPVIAPVIAPVIAPVINPGAPGGGGGGGGGTAAPVTNVNNNTNNNIITTPPGGGGGDTTIIINNPPGGGGGDVTGPVTNIGDIGNIGDIGLGDISLGDIGLGDISLGDIGNLTGPILTDILTSGITLSEILPVNLLSDNVFGDLISAPS
IGDLTDIGNFVQNLTNIGVIDQSLAIGDIINSLANIGDVTGIGPVGDFLQDIAFLNDLTGIGQVGDFLQNLTGIGSIDPSLLQNITGIVQDVNLTDTDVLSNLVNVGDFLSNVSGIGDVTNIGQVLQNFANFGDLTNVGQVGDILSNLVNVGDPSSVIGDILTNAGDLSGIGEIGNILSGLSQIGDISNI
ANVADVLQQFAQIGDLSVFNSVLDGLTGVFDPTVTFNDLVDVLSNIGDINTLNATLTDVLNDFTGIGQIGDVLSGLVGLNNEGALGQIGDVLTAFGNIENLNAIGDVLSNIGNGSGVGELLTGDVTAINQIGDVLSNIGQIGDGANFTAIGSALENIANITDPTIIGQIGDFTNVGNLTDVGQIAGFFQD
IAQLSDISVLSPMFENIALLSDLIDAGDVTALNQINEILTNVASGNELTDVLSNIALISDPTVISQVGELLSGNQLGDITGIAGDFGNVSDVVTNLLSDNQLGDFAGQIGDVLSGNEVGDVISGIAGGNQVGDVLSGITALNDAAAVGQVGDILSNFAQVTDNTVITQIGEALSGNQFGDVLSNLAQFDP
VVLGQVGDVLSGFTAFSDPAVIGQVGDILSGNVGAIGQVGDVLSNLASAGDIASIGAIGDALQNFANLSDTSLLSDLISAGDFTAVGPLFENLAQLGDVNNLSVIGDILSGNVAQGGDVLNNIANADGVTQFGDVLSGIGSGNLAQIGDVLSGNVAQLSDFSDFAQVGDILSNLGALNDPVLIGQFGDIL
SGLASNNPVVISDVAEILSGNAAQFGPITTFLGDIASISDSTILGQIGDVLSGFGNMENLSGIGDLLSGNNGDILSDLVGIGDGNGIGQVGDVLSNLATVSDNLNVGALGAALQDIASIGDPSAMFGDILSGDVLSNISNFGDLGLAELNQVGAFFQDIAQVGDLTAIGQVFDSLVSLGDVANVGEIGDV
LSGFGLFNDVLSNLGSFGDNATIGSLGAALQDFANISDAALIGDVLSNIASGDPSAALGDVLSNIAQLGDITDNTVVGEVGDVLSNFAQITDPAIINDFSEALSGLGSWNQLGDLLAGNQFGDVLSGLAQIGDPTAIGQLGDVLIGIGNIENLGQFADVLNGDLFSGNVGEIGDVLSQLATLGDTANLTA
IGNTLQDFANITDPSVLSDILNPSSDIGDVLSGFTTGDFGQLTAFFSDLADIGDINVIGDVLSNVAQLSDIANGNAITDVLSGIAGGNEIGDVVGGIANGDNGVGQIGDVAAISLAQISDVLNGNQFGDVLSGDFGQIGDVLSGLTGISDPAVIAQVGDVLTGLAGGNDISDVLNGLTTGDFVSIGEIGD
VLSGIANADNVGQIGDVLSGFGNLENVGQFSEILSGLVGVGDFAPVTTLGSVLQDFANTGDISQVGTFFENITQNGDLNVLNPVLENISTLSDFGNITDISDVLSGFGNISDPTIVAPITDVLSGVANISDPTVIGQVGDVLSGLASGNEVGDVLSGLTGIGDGNSIGQLGDILSGLGSFGDVNGIGEIS
DVLSNFGGLANIGQVGDILSNFDAISDNLNIGSLAATLQNVAQMGDFAPFLQDVGQVGDIAGISAVFENLSALNEISNVGQISDVLSNIGNANEVGDVLSGLANANQLGDVLSGIANVSDPSVLGQIGDVLSGFGSGNEIGDVLSGLATITDPIVLGEVGDILSGIANLDNTQIGNVLSDLVDASDFANV
GQIGDVLSNLAGAGDFTNIGQIGDLLSNFGTIGDSFNIGEIGAVLQDIAQTGDISQLGAFVDTLGQMGDLNVLSPVFESITALNDISNIGQIGDVLSNFVEAGNANQLGDVLSGIANISDPTVVGQINDVLSSFGNANDVSDVLSDLIAVGDNATIGQIGDVLSSIGSFENVGQISESLNDLSALSDNLN
ISELSAVLQDVAQTGDIGQFAAFLQDVAQVGDIGQLGAVFENLSVLSDFANSSDIGDVLSGNANPVTEILPGDFSDIGQISDVLNDLSALNPAVVGQVGDVLSGFGNITDPTFIGQFGNVLNDLVDAGNENQLAPLLSDLIEVGDVTNIGQFSDILNDLSALNPSDIGQVGDVLSGLSGIDAGDVSGIGD
VLSGNAGQFGDVLSSLVALSDTVDIGNLGGALQDFANISDSTVLSDLFNGLAGGDPSAAIGDVLSGISAGDIGSITAFFDDLAQIGDFGDVSAVFDNISVLGDILSGNDIAGTISDIASGNAVFGQVGDFLNGVGTISDPSVIGEIGDVLSGLSAIGDPTIIGQFGDVLSGIVSGNQISDVLSGDFGQLG
PISSVIGDLTGISDPTVIGQVGDVLSDLVDAGDITNIGQVGDLLSGNAGEIGDVLSNLAALSDTVDVGNLGATLQDFANISDPSVLNDVIDSVINVSGDPSVVIGDVLSGLSAGDIGSLTAFFEDLAQVGDFGNVTAVIENLATLGDFGNIGQIGDFIANIGEIPGLGDLPGLGDLPGLGNLPGLGELPD
FSDVLDPSVIGDLTGGIGAVEFVGDISGSFSGAAEAVAGVAGAAAGAAEGAATAAGAVTGAFAAVGEAGGTLSGAFDGSAGAAAQAAGALSGGATALGDASGSLGGAFAGGAEALAGAAGGAAGAVSGAAGAAAGATGALAGTAGAASEVAGNLGGAFAGGAEAVGGAAGALAGSAGAVSDATGAVAGSA
GAAGQTAGTVAGAAAAAAGGAAAAAAGLAAVAAGGAEAIGGFTGMGEALAGAAGDLAGSAGAVGGVTGALAGSAGALGEAAGAAGAAMQGGATAAGDVAGALAGSAGAVGDVAGTAAAGLAGGAGAVGDVAGSLAGSAGALGEAAGAASGALAGGAEALGGAAGAFSGALESGADAAAGAAGAFAGAAGA
AGDVAGAVGSGLSGGAAAAGALAGSAGALGDVAGAVGGAATGGAGAVGDVAGALAGSASGLAGAAGGLTGAVEGGASAFGDAAGALAGSAGALGEAAGAATGAFAGGAQALGDAGTALAGSAGAVGDVAGALAGSAGAVGDVAGTLAGSAGALGEAAGAVGGAFAGGAEALGGAAGALAGSAGAVGDVAG
TLAGSAAAFGDVAGAGAGALAGGAEALGGVAGGLAGSAGAVGDVAGGLAGSAGALGEAAGGFAGAFEGGAAALGDAAGGLAGVAGAAGEAGGALAGAAGAAGDVAGALAGSAGAAGDVAGALAGSAGALGEAGGALAGSAGALGGAAGAIAGAAEAGAGIGGELGDTAFGLGGALAGGADAAAGAAGALS
GSAEALGGVAGGAAGAFAGGAEAVGGAAGALAGSAGALGGVAGGAAGAFAGGAEAVGGAAGALAGSAGALGGVAGGAAGAFAGGAEVVGGAAGALAGSAGAVGDVAGSAAGAFAGGAGALGEAGAGLAGSAGAVGDAAGAVAGSAGVVGDAAGALAGSAGAVGDAAGAFSGALAGGAEAIGGVAGAAAGS
AGAVGDVAGALAGSAGVVGDAAGAAAGAFSGGAEALGGAAGALAGSAGAVGDVAGTLAGSAGALGETAGAFTGAFEGGAGAVGDAAGALAGSAEVLGDTAGAFSGALQGGAAAAGSTAAALAGSAGALGDAAGSVGGALSGGADALASTAGAAAGSAGALGGLAGALGGAFGGGAAALGGVAGAAGAGLE
GGAGAAGGAAGALAGSAGALGETAGTLGGALAGGADAFGGATGALAGSAGALGDAAAAFSGALESGADAAGGLAGSAGVIGDVAGGLAGSAGALGDMAGAGGAALAGGAGAAAAAAGALAGSAGALGDVAGAAAGGAEAVGDVAGALAGTADAGGALAGSAGAIGDTAGAFTGAFQGGADALGGAGGALA
GSAGAVGDAAGGFAGAVDGGAGIIGDAAGVFAGTAGGTAEAVGGVTGAVAGGADALGGAAGALSGSTAFLGDATAGIAGAGGGAAEAVGGAAGAVSGGAEALGGAAGAVSGTLDGAAGITGGLTTAPDSVSSTSFSDGTDGFGGVTGTVTDTVGAVTDYSTYSAPVTEYIAPLPDYTAPVTDTVTSGAET
LGGTASGLTSGLTSGLSSGLSQTWDSGLTSAFDAPAGDSTDFIG

Molecular weight: 389.46 kDa
Isoelectric point according different methods:

Protein with the highest isoelectric point:

>tr|F6EPG8|F6EPG8_AMYSD 50S ribosomal protein L34 

MAKGKRTFQPNNRRRARVHGFRLRMRTRAGRSIISARRRKGRAELAV

Molecular weight: 5.55 kDa
Isoelectric point according different methods:

General Statistics

Number of major isoforms	Number of additional isoforms	Number of all proteins	Number of amino acids	Min. Seq. Length	Max. Seq. Length	Avg. Seq. Length	Avg. Mol. Weight
4,673	30	4,703	1,461,867	37	7,481	312.8	33.7 kDa

Amino acid frequency

Ala	Cys	Asp	Glu	Phe	Gly	His	Ile	Lys	Leu	Met	Asn	Gln	Pro	Arg	Ser	Thr	Val	Trp	Tyr
12.48	0.78	5.93	5.9	3.19	8.69	2.26	4.67	2.28	9.98	2.05	2.23	3.0	5.47	7.28	5.88	5.94	8.48	1.44	2.08

Note: For statistics only major isoforms were used (in this case 4,673 proteins)
For dipeptide frequency statistics click here

See this proteome in:

Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI: proteome isoelectric point database. Nucleic Acids Res. 2016. doi: 10.1093/nar/gkw978

Contact: Lukasz P. Kozlowski