Proteome-pI - Proteome Isoelectric Point Database statistics

Siansivirga zeaxanthinifaciens CC-SAMT-1

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Siansivirga; Siansivirga zeaxanthinifaciens

Average proteome isoelectric point is 6.67

Get precalculated fractions of proteins

Acidic

pI < 6.8

6.8-7.4

pI > 7.4

Basic

All

Virtual 2D-PAGE plot for 2,744 proteins (isoelectric point calculated using IPC_method)

Get csv file with sequences according given criteria:

* You can choose from 18 different methods for calculating isoelectric point

Protein with the lowest isoelectric point:

>tr|A0A0C5WI01|A0A0C5WI01_9FLAO Uncharacterized protein 

MKKNFILIFLFLTSLIGNAQQQSEDCIVPASLTLTHFNTAKYVPGGHLAVFFEPEGVFELDNEFVLELSDASGSFSTATTLSMKSEFFIPVLNGIIPLDIAPGSNYKLRIRTTAPFASVETDAFEIISQTTPDVVPAEITFINNAFTDLDNFIKCVDLAHDNYFFGHKDKGLTEVTPSDGGGIKLGLLGG
NSSNTVVRMLINGLWQELSITTIGSQFTIPSGLPVGYYLMELDKTVNPNTPNEYHNISGFIFHFNTNITGIANTSSETICVDQNAGFEVPIASIQYNYPGSMYSIHYGDSDETDTSTFDFYTHARLVNCNTLNHVYNATTCSSIFQDENPGNDNFYFKLDFNLYSEGLFNSDSDQFECETYTKNGGGTTK
WINASLKPSADLIAPDIICEGLAIVATDNSTSGLYGFGPECSSDYNTYWEVAAPGDDWVSVDPNNSIFTGWIDDVARTLTIPGSITSNNPGFWGIRLIISNPLGCVQSDTDEQTVIVEPIPAPSFDYTYQDNLCAPVTIEFTNTSNTEDINPPSFGNPTYTWSVVPDLTTPASLNGFTLLDENPNDNIDA
ANQTDIDIRFTQPGTYIVTLQLENECGTIFFPQNITIIGDPTVSFNPNSLEVCQEAPANYTLDFSDSTIQPLYSDTPYTPTTFLWEVFEIDGVTPASNYTFVNSTDAGTNYPQINFTEFGEYLIRITVSGNCEGNGSDDFLFNLKQTPIITNTNLTQEICSGDDTDEILLLTDISNSTFEWEVTTSDDIT
GFPEGVQTTTTIPSMPLINTCNTSGVVTIQVTPFNDGCEGLPVEFQITVNPKPFIFDLNTTICSGDTFLIEPNNDCANGQIVPENTTYNWVVDSQGPDLNGESGSGTSISQSLNNISDSVQSVVYLVTPTSGDTGSCLGDEFTLTVTVNPEPVVAGQAVTVCSDQALGIDFGSSSSVAATSYNITALTLN
GLTVSSGGAGESSGLSASDLSDDAFTNTTPAAVDVVYTVVPVTSEGCEGEEFTLTVTVDPEPVVADQTLTVCSDVAIGYTIEGDVDTPVVATYNLTNVESNGLVGAGTNQGIENGLSSDALINDVWTNDTPSPVDVVYTLEPIGDNGCGGDEFTVTVTVDPEPVVADQAVTVCNDVAIGYTIQGDVDTPL
VASYNLISIVDNGLVGSTSNQGVGNTLPSDALTGDVWTNVTANSVDVLYTLVPIGDNGCEGDEFTLTVTVNPEPVVAGQAVTVCSDQALGIDFGSSSSVAATSYNITALTLNGLTVSSGGAGESSGLSASDLSDDAFTNTTPAAVDVVYTVVPVTSEGCEGEEFTLTVTVDPEPVVADQTLTVCSDVAIG
YTIEGDVDTPVVATYNLTNVESNGLVGAGTNQGIENGLSSDALINDVWTNDTPSPVDVVYTLEPIGDNGCGGDEFTVTVTVDPEPVVADQAVTVCNDVAIGYTIQGDVDTPLVASYNLISIVDNGLVGSTSNQGVGNTLPSDALTGDVWTNVTANSVDVLYTLVPIGDNGCEGDEFTLTVTVNPEPVVAG
QAVTVCSDQALGIDFGSSSSVAATSYNITALTLNGLTVSSGGAGESSGLSASDLSDDAFTNTTPAAVDVVYTVVPVTSEGCEGEEFTLTVTVDPEPVVADQTLTVCSDVAIGYTIEGDVDTPVVATYNLTNVESNGLVGAGTNQGIENGLSSDALINDVWTNDTPSPVDVVYTLEPIGDNGCGGDEFTVT
VTVDPEPVVADQAVTVCNDVAIGYTIQGDVDTPLVASYNLISIVDNGLVGSTSNQGVGNTLPSDALTGDVWTNVTANSVDVLYTLVPIGDNGCEGDEFTLTVTVNPEPVVAGQAVTVCSDQALGIDFGSSSSVAATSYNITALTLNGLTVSSGGAGESSGLSASDLSDDAFTNTTPAAVDVVYTVVPVTS
EGCEGEEFTLTVTVDPEPVVADQTLTVCSDVAIGYTIEGDVDTPVVATYNLTNVESNGLVGAGTNQGIENGLSSDALINDVWTNDTPSPVDVVYTLEPIGDNGCGGDEFTVTVTVDPEPVVADQAVTVCNDVAIGYTIQGDVDTPLVASYNLISIVDNGLVGSTSNQGVGNTLPSDALTGDVWTNVTANS
VDVLYTLVPIGDNGCEGDEFTLTVTVNPEPVVAGQAVTVCSDQALGIDFGSSSSVAATSYNITALTLNGLTVSSGGAGESSGLSASDLSDDAFTNTTPAAVDVVYTVVPVTSEGCEGEEFTLTVTVDPEPVVADQTLTVCSDVAIGYTIEGDVDTPVVATYNLTNVESNGLVGAGTNQGIENGLSSDALI
NDVWTNDTPSPVDVVYTLEPIGDNGCGGDEFTVTVTVDPEPVVADQAVTVCNDVAIGYTIQGDVDTPLVASYNLISIVDNGLVGSTSNQGVGNTLPSDALTGDVWTNVTANSVDVLYTLVPIGDNGCEGDEFTLTVTVNPEPVVAGQAVTVCSDQALGIDFGSSSSVAATSYNITALTLNGLTVSSGGAG
ESSGLSASDLSDDAFTNTTPAAVDVVYTVVPVTSEGCEGEEFTLTVTVDPEPVVADQTLTVCSDVAIGYTIEGDVDTPVVATYNLTNVESNGLVGAGTNQGIENGLSSDALINDVWTNDTPSPVDVVYTLEPIGDNGCGGDEFTVTVTVDPEPVVADQAVTVCNDVAIGYTIQGDVDTPLVASYNLISIV
DNGLVGSTSNQGVGNTLPSDALTGDVWTNVTANSVDVLYTLVPIGDNGCEGDEFTLTVTVNPEPVVAGQAVTVCSDQALGIDFGSSSSVAATSYNITALTLNGLTVSSGGAGESSGLSASDLSDDAFTNTTPAAVDVVYTVVPVTSEGCEGEEFTLTVTVNPEPVVLSISDIEVCTGEIVDTIIFSTTNT
GGVISYNWEINTDIGLLPLSVVGDIPSFTSQNSSNVPLVATVDVTPTFTANGLSCQGLSESFQIVVNPRPLINDKIVEICSEDTFSIQPLNNIDGDVVPNGTEYSWQVLLPNTNITGATSGSGTIISQTLINTSNEAQVVVYEVTPISNAIGACEGSTFEIEVTVTPRPFLQNQNFETCSGDTFTFSPIN
NPPNTIIPIGTTYTWTFTNNPNITGETDGINEAQFEQLNLINSTNVDQSVVYNITATAASCSYSFVIELVVKPTPFIPYNSGLTDTRCSGDPFIIQPVNGVPDSSTIVPINTTYTWVVIPNPNISGWSDNSTPVGLISQELYNLTNVNQSIEYIVTPYNGTCVGQTFSVLIWIEPKPQIPNHIETLCDGD
SFVFAPVNGVFPDSKTIVPDLTLYSWSVNDLSGGLISGYSNGVDQPFIDTGILNNDSNSVQTLIYDVTPTYYVNSNPNMPQCIGDTFTLTVSVNPGVEANAVVTNISCSYSPLCGGSIELNPSGVGPYTFNWTYSGSEINAISDPTLQNQYNLCPGDYMVEITDVFGCTYEFSYVIVPPQPVTFSLVSLV
DLSCNNISPNCDGYIEVDLQGGTLPYSLIEWYTESIPNSGNFDTIVSTGSNQLANACEGNYILKVLDTNACEFTSEIYTVEQTSSPIVINDQISDYNGYGVSCSNTNDGFITVDVLGGSGSFTYTLNPGDIQDSDPSTPNLLEFENLAPGAYTLDIIDSNCPQSITLNYNLTVPTAILSSHVLVSSPISC
YGGTETYTITASGGVPPYTGTGNYTLTAGTHDIVITDANGCSTTESIAVLEPTALTVNAAVTSSILCHGDSGIVTITASGGTPPYTGVGNITVSAGNCNYTVTDANGCSYSDTITVNEPDELLYTIDSTTNPTCSPDWSYTNGSICITITGGTNPIPTGTGWTDYGNGSWCLENLSAGDYAIDVTDDNGC
PSNGATDITLTRPPAIDAYITSNINADCSINTITQTNYVFVTGGTPPYEFSWSGGEVCDPINPQCMETTVSGTYTVYIHDQESLANGCPPIEVDVVVDLPEIGDAAFSYTSPNSILCDVLSFEEPISFFNESTGDIVNLTWDFGDGSMDVVGEENPTHVYSEIGTYQVELTVEYPYGCTETYSEVIEITK
GYDIVIPNAFTPNGDGINDTIRPVSLCMVQVKMSIYDTWGSLLYVEVGENDIINGWDGTIKGNPAENGNYIIVVEATTYRGETIELNGPITLIK

Molecular weight: 427.39 kDa
Isoelectric point according different methods:

Protein with the highest isoelectric point:

>tr|A0A0C5VWI7|A0A0C5VWI7_9FLAO 50S ribosomal protein L34 

MSKRTFQPSKRKRRNKHGFRERMASANGRKVLARRRAKGRKKLSVSSESRHKK

Molecular weight: 6.31 kDa
Isoelectric point according different methods:

General Statistics

Number of major isoforms	Number of additional isoforms	Number of all proteins	Number of amino acids	Min. Seq. Length	Max. Seq. Length	Avg. Seq. Length	Avg. Mol. Weight
2,728	16	2,744	962,384	49	4,610	352.8	39.7 kDa

Amino acid frequency

Ala	Cys	Asp	Glu	Phe	Gly	His	Ile	Lys	Leu	Met	Asn	Gln	Pro	Arg	Ser	Thr	Val	Trp	Tyr
6.4	0.77	5.58	6.27	5.26	6.32	1.75	8.13	7.89	9.23	2.04	6.72	3.27	3.38	3.16	6.46	6.03	6.21	1.05	4.06

Note: For statistics only major isoforms were used (in this case 2,728 proteins)
For dipeptide frequency statistics click here

See this proteome in:

Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI: proteome isoelectric point database. Nucleic Acids Res. 2016. doi: 10.1093/nar/gkw978

Contact: Lukasz P. Kozlowski