Tacaribe virus (strain Franze-Fernandez) (TCRV)
Taxonomy: Viruses; ssRNA viruses; ssRNA negative-strand viruses; Arenaviridae; Mammarenavirus; Tacaribe mammarenavirus
Average proteome isoelectric point is 6.99
Get precalculated fractions of proteins
Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC_method)
Get csv file with sequences according given criteria:
* You can choose from 18 different methods for calculating isoelectric point
Protein with the lowest isoelectric point:
>sp|P20430|L_TACVF RNA-directed RNA polymerase L
MDETVSELKDLVRKHIPNRHEFAHQKDAFLSHCHSGSLLQEGFKLLSNLVELESCESHACHLNTCQKYVDVILSDHGIPCPTLPKVIPDGFKLTGKTLILLETFVRVNPEEFERKWKSDMTKLLNLKQDLLRSGITLVPVVDGRTNYSNRFTPEWVVERIRWLLIEILRKSRSSAEIDIEDQEYQRLIHS
LSNVRNQSLGFENIECLKRNLLEYDDRLAKSLFVGVKGDVRESVIREELMKLRLWYKKEVFDKNLGKFRITNRSELLNNLIRLGKHEDNTTSDCPFCVNKFMDIIYSLTFTALKRQDREKSNSELDQYVVCPHEKAYLGVLSICNKIKGLKVFNTRRNTLLFLDLIMVNFLDDLFTAKPEALDSLRRSGL
ILGQMVTLVNDRALDFLEAVKLIKKKIETNVKWVENCSKILRRSQQDIWSQISVWARYPDLSKLISIAQTISSDRPIMRYSAGGNFNTECKHKTFHMMSDAEQVEAFKILSSVSLSLINSMKTSFSSRLLINEKEYSRYFGNVRLRECYQQRFFLTDGLIVILFYQKTGERSGCYSIYTCEDGVLVEKGS
FYCDPKRFFLPIFSQEVLVEMCDEMTTWLDFNSDLMVISKEKLRLLLLSILCAPSKRNQVFLQGLRYFLMAYSNQFHHVDLLSKLKVECMSGSEVIVQRLAVDLFQCLLGEGVDSDPYFARRFKYLLNVSYLCHLITKETPDRLTDQIKCFEKFIEPKIDFNCVIVNPSLNGQLTEAQEGMMLDGLDKFY
SKTLKDCSDTKLPGVSNELLSYCISLFNKGKLKVTGELKNDPFKPNITSTALDLSSNKSVVVPKLDELGNVLSVYDREKMISSCVSSMAERFKTKGRYNIDPSTLDYLILKNLTGLVSIGSKTQRDCEELSMMFEGLTEEQAEAFNDIKNSVQLAMVKMKDSKSGDVNLSPNQKEGRVKSSTGTLEELWG
PFGIMREIRTEVSLHEVKDFDPDVLASDLYKELCDVVYYSSSKPEYFLERPLEVCPLGLLLKNLTTSAYFDEEYFECFKYLLIQGHYDQKLGSYEHRSRSRLGFTNEALRVKDEVRLSMRESNSEAIADKLDRSYFTNAALRNLCFYSDDSPTEFTSISSNNGNLKFGLSYKEQVGSNRELYVGDLNTKL
ITRLVEDFAEAVGSSMRYTCLSSEKEFDRAICDMKLAVNNGDLSCSLDHSKWGPTMSPALFLTFLQFLELRTPKERNIINLEPVLNVLRWHLHKVIEVPVNVAEAYCTGNLKRSLGLMGCGSSSVGEEFFHQFMPVQGEIPSHIMSVLDMGQGILHNMSDLYGLITEQFLNYVLDLLYDVIPTSYTSSDD
QVTLIKLPCASDDNQVNDEWLEMLCFHEYLSSKLNKFVSPKSVAGTFVAEFKSRFFVMGEETPLLTQFVAAALHNVKCKTPTQLSETIDTICDQCVANGVSVQIVSKISQRVNQLIKYSGFKETPFGAVEKQDVKDWVDGTRGYRLQRKIESIFSDDEMTGFIRSCAKRVFNDIKRGKVFEENLISLIGR
DGDDALVGFLRYSSCSEQDIMRALGFRWVNLSSFGDLRLVLRTKLMTSRRVLEREEVPTLIKTLQSRLSRNFTKGVKKILAESINKSAFQSSVASGFIGFCKSIGSKCVRDGEGGFLYIKDIYTKVKPCLCEVCNMKRGVIYCRPSLEKIEKFSKPILWDYFSLVLTNACEIGEWVFSSVKEPQIPVVLS
NRNLFWAVKPRIVRQLEDQLGMNHVLYSIRKNYPKLFDEHLSPFMSDLQVNRTLDGRKLKFLDVCIALDLMNENLGIVSHLLKARDNSVYIVKQSDCAMAHVRQSDYVDKEVGLSPQQVCYNFMVQIILSSMVNPLVMSTSCLKSFFWFNEVLELEDDGQIELGELTDFTFLVRDQKISRAMFIEDIAMG
YVISNLEDVRLYIDKITIGEQPLAPGRHINDLLDLLGNFDDHEDCDLRFLIQVEHSRTSTKYRFKRKMTYSFSVTCVSKVIDLKEASVELQVVDVTQSVSGSGGSHLLLDGVSMIAGLPIFTGQGTFNMASLMMDADLVETNDNLILTDVRFSFGGFLSELSDKYAYTLNGPVDQGEPLVLRDGHFFMGT
EKVSTYRVELTGDIIVKAIGALDDPEDVNALLNQLWPYLKSTAQVMLFQQEDFVLVYDLHRSGLIRSLELIGDWVEFVNFKVAYSKSLKDLVVSDNQGSLRLRGIMCRPLARRNTVEDIE
MDETVSELKDLVRKHIPNRHEFAHQKDAFLSHCHSGSLLQEGFKLLSNLVELESCESHACHLNTCQKYVDVILSDHGIPCPTLPKVIPDGFKLTGKTLILLETFVRVNPEEFERKWKSDMTKLLNLKQDLLRSGITLVPVVDGRTNYSNRFTPEWVVERIRWLLIEILRKSRSSAEIDIEDQEYQRLIHS
LSNVRNQSLGFENIECLKRNLLEYDDRLAKSLFVGVKGDVRESVIREELMKLRLWYKKEVFDKNLGKFRITNRSELLNNLIRLGKHEDNTTSDCPFCVNKFMDIIYSLTFTALKRQDREKSNSELDQYVVCPHEKAYLGVLSICNKIKGLKVFNTRRNTLLFLDLIMVNFLDDLFTAKPEALDSLRRSGL
ILGQMVTLVNDRALDFLEAVKLIKKKIETNVKWVENCSKILRRSQQDIWSQISVWARYPDLSKLISIAQTISSDRPIMRYSAGGNFNTECKHKTFHMMSDAEQVEAFKILSSVSLSLINSMKTSFSSRLLINEKEYSRYFGNVRLRECYQQRFFLTDGLIVILFYQKTGERSGCYSIYTCEDGVLVEKGS
FYCDPKRFFLPIFSQEVLVEMCDEMTTWLDFNSDLMVISKEKLRLLLLSILCAPSKRNQVFLQGLRYFLMAYSNQFHHVDLLSKLKVECMSGSEVIVQRLAVDLFQCLLGEGVDSDPYFARRFKYLLNVSYLCHLITKETPDRLTDQIKCFEKFIEPKIDFNCVIVNPSLNGQLTEAQEGMMLDGLDKFY
SKTLKDCSDTKLPGVSNELLSYCISLFNKGKLKVTGELKNDPFKPNITSTALDLSSNKSVVVPKLDELGNVLSVYDREKMISSCVSSMAERFKTKGRYNIDPSTLDYLILKNLTGLVSIGSKTQRDCEELSMMFEGLTEEQAEAFNDIKNSVQLAMVKMKDSKSGDVNLSPNQKEGRVKSSTGTLEELWG
PFGIMREIRTEVSLHEVKDFDPDVLASDLYKELCDVVYYSSSKPEYFLERPLEVCPLGLLLKNLTTSAYFDEEYFECFKYLLIQGHYDQKLGSYEHRSRSRLGFTNEALRVKDEVRLSMRESNSEAIADKLDRSYFTNAALRNLCFYSDDSPTEFTSISSNNGNLKFGLSYKEQVGSNRELYVGDLNTKL
ITRLVEDFAEAVGSSMRYTCLSSEKEFDRAICDMKLAVNNGDLSCSLDHSKWGPTMSPALFLTFLQFLELRTPKERNIINLEPVLNVLRWHLHKVIEVPVNVAEAYCTGNLKRSLGLMGCGSSSVGEEFFHQFMPVQGEIPSHIMSVLDMGQGILHNMSDLYGLITEQFLNYVLDLLYDVIPTSYTSSDD
QVTLIKLPCASDDNQVNDEWLEMLCFHEYLSSKLNKFVSPKSVAGTFVAEFKSRFFVMGEETPLLTQFVAAALHNVKCKTPTQLSETIDTICDQCVANGVSVQIVSKISQRVNQLIKYSGFKETPFGAVEKQDVKDWVDGTRGYRLQRKIESIFSDDEMTGFIRSCAKRVFNDIKRGKVFEENLISLIGR
DGDDALVGFLRYSSCSEQDIMRALGFRWVNLSSFGDLRLVLRTKLMTSRRVLEREEVPTLIKTLQSRLSRNFTKGVKKILAESINKSAFQSSVASGFIGFCKSIGSKCVRDGEGGFLYIKDIYTKVKPCLCEVCNMKRGVIYCRPSLEKIEKFSKPILWDYFSLVLTNACEIGEWVFSSVKEPQIPVVLS
NRNLFWAVKPRIVRQLEDQLGMNHVLYSIRKNYPKLFDEHLSPFMSDLQVNRTLDGRKLKFLDVCIALDLMNENLGIVSHLLKARDNSVYIVKQSDCAMAHVRQSDYVDKEVGLSPQQVCYNFMVQIILSSMVNPLVMSTSCLKSFFWFNEVLELEDDGQIELGELTDFTFLVRDQKISRAMFIEDIAMG
YVISNLEDVRLYIDKITIGEQPLAPGRHINDLLDLLGNFDDHEDCDLRFLIQVEHSRTSTKYRFKRKMTYSFSVTCVSKVIDLKEASVELQVVDVTQSVSGSGGSHLLLDGVSMIAGLPIFTGQGTFNMASLMMDADLVETNDNLILTDVRFSFGGFLSELSDKYAYTLNGPVDQGEPLVLRDGHFFMGT
EKVSTYRVELTGDIIVKAIGALDDPEDVNALLNQLWPYLKSTAQVMLFQQEDFVLVYDLHRSGLIRSLELIGDWVEFVNFKVAYSKSLKDLVVSDNQGSLRLRGIMCRPLARRNTVEDIE
Molecular weight: 252.23 kDa
Isoelectric point according different methods:
Isoelectric point according different methods:
Protein with the highest isoelectric point:
>sp|P18140|NCAP_TACVF Nucleoprotein
MAQSKEVPSFRWTQSLRKGLSQFTQTVKSDILKDAKLIADSIDFNQVAQVQRVLRKTKRTDDDLNKLRDLNIEVDRLMSMKSVQKNTIFKVGDLARDELMELASDLEKLKDKIKRTESNGTNAYMGNLPQSQLNRRSEILRTLGFAQQGGRPNGIVRVWDVKDSSKLNNQFGSMPALTIACMTVQGGETM
NNVVQALTSLGLLYTVKYPNLSDLDKLIPNHECLQIITKEESSINISGYNLSLLAAVKAGASILDGGNMLETIRVSPDNFSSLIKNTLQVKRREGMFIDDRPGSRNPYENLLYKLCLSGDGWPYIGSRSQIMGRSWDNTSVDLTKKPDAVPEPGAAPRPAERKGQNLRLASLTEGQELIVRAAISELDPS
NTIWLDIEDLQLDPVELALYQPAKKQYIHCFRKPHDEKGFKNGSRHSHGILMKDIEDAVPGVLSYVIGLLPPNMVITTQGSDDIRKLLDIHGRKDLKLIDVKFTSDQARLFEHQVWDKFGHLCKQHNGVIISKKNKSKDSPPSPSPDEPHCALLDCIMFHSAVSGELPKEEPIPLLPKEFLFFPKTAFAL
MAQSKEVPSFRWTQSLRKGLSQFTQTVKSDILKDAKLIADSIDFNQVAQVQRVLRKTKRTDDDLNKLRDLNIEVDRLMSMKSVQKNTIFKVGDLARDELMELASDLEKLKDKIKRTESNGTNAYMGNLPQSQLNRRSEILRTLGFAQQGGRPNGIVRVWDVKDSSKLNNQFGSMPALTIACMTVQGGETM
NNVVQALTSLGLLYTVKYPNLSDLDKLIPNHECLQIITKEESSINISGYNLSLLAAVKAGASILDGGNMLETIRVSPDNFSSLIKNTLQVKRREGMFIDDRPGSRNPYENLLYKLCLSGDGWPYIGSRSQIMGRSWDNTSVDLTKKPDAVPEPGAAPRPAERKGQNLRLASLTEGQELIVRAAISELDPS
NTIWLDIEDLQLDPVELALYQPAKKQYIHCFRKPHDEKGFKNGSRHSHGILMKDIEDAVPGVLSYVIGLLPPNMVITTQGSDDIRKLLDIHGRKDLKLIDVKFTSDQARLFEHQVWDKFGHLCKQHNGVIISKKNKSKDSPPSPSPDEPHCALLDCIMFHSAVSGELPKEEPIPLLPKEFLFFPKTAFAL
Molecular weight: 63.81 kDa
Isoelectric point according different methods:
Isoelectric point according different methods:
General Statistics
Number of major isoforms |
Number of additional isoforms |
Number of all proteins |
Number of amino acids |
Min. Seq. Length |
Max. Seq. Length |
Avg. Seq. Length |
Avg. Mol. Weight |
|---|---|---|---|---|---|---|---|
0 |
3,370 |
95 |
2,210 |
842.5 |
96.0 kDa |
Amino acid frequency
Ala |
Cys |
Asp |
Glu |
Phe |
Gly |
His |
Ile |
Lys |
Leu |
Met |
Asn |
Gln |
Pro |
Arg |
Ser |
Thr |
Val |
Trp |
Tyr |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
3.8 |
2.73 |
6.08 |
6.44 |
4.84 |
5.4 |
2.02 |
5.76 |
6.74 |
12.17 |
2.49 |
5.07 |
3.5 |
3.59 |
5.46 |
8.66 |
4.69 |
6.56 |
1.22 |
2.79 |
For dipeptide frequency statistics click here
See this proteome in:
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here
Reference: Kozlowski LP. Proteome-pI: proteome isoelectric point database. Nucleic Acids Res. 2016. doi: 10.1093/nar/gkw978  |
Contact: Lukasz P. Kozlowski |