Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754)

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium; [Clostridium] stercorarium; [Clostridium] stercorarium subsp. stercorarium

Average proteome isoelectric point is 6.67

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All


Virtual 2D-PAGE plot for 2,669 proteins (isoelectric point calculated using IPC_method)

Get csv file with sequences according given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 18 different methods for calculating isoelectric point
Protein with the lowest isoelectric point:
>tr|L7VKP3|L7VKP3_CLOSH Ferredoxin
MKAFVDKDVCIGCGLCTDLCPEVFSMDDDGTATAIDEEISEDTEDAAREAAEQCPVGAIKIDEED
Molecular weight: 6.95 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|L7VSJ4|L7VSJ4_CLOSH 50S ribosomal protein L34
MKRTYQPKKRQRKVEHGFRKRMKTRNGRKVLKRRRLKGRKRLTA
Molecular weight: 5.56 kDa
Isoelectric point according different methods:





General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2,664

5

2,669

854,120

30

1,808

320.6

36.2 kDa
Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

6.66

1.19

5.34

7.4

4.45

6.88

1.56

8.42

7.1

9.01

2.71

5.03

2.57

3.66

4.86

5.71

5.13

7.17

0.94

4.21
Note: For statistics only major isoforms were used (in this case 2,664 proteins)
For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI: proteome isoelectric point database. Nucleic Acids Res. 2016. doi: 10.1093/nar/gkw978       Contact: Lukasz P. Kozlowski