Proteome-pI - Proteome Isoelectric Point Database statistics

Barley yellow mosaic virus (isolate China/Yancheng/1998) (BaYMV)

Taxonomy: Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae; Bymovirus; Barley yellow mosaic virus

Average proteome isoelectric point is 6.29

Get precalculated fractions of proteins

Acidic

pI < 6.8

6.8-7.4

pI > 7.4

Basic

All

Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC_method)

Get csv file with sequences according given criteria:

* You can choose from 18 different methods for calculating isoelectric point

Protein with the lowest isoelectric point:

>sp|Q9YJW2|POL2_BAYMY Genome polyprotein 2 

MSASSSRLLFDCGSLDWPNKSLFGDPTTRDVMNEHISSTWNAVIRRHMLAPNANAETILGRDGLPSAQFDAYGAMLPSFIQALNAPTTRLRISAPLSTAESILCADASHAPWLYMANSVCAYEATHLQPVQTFIAFNFAHGYCYLSLFIPLSFRITFENARGFSRFLEQLPDILGAYPTLAAIYKTMLFA
IRLFPEVLQAPIPIIAKRPGVLQFHVSDARGLPPSWFPMKCGSVASFVALITNNLNSDLLNGIVGSNGDGEHYTNWNSGHDHWIVNRFITVKDLHSSLKSALEVDLDTEGGRNAVLDLLLDLGVTNLVRREKRFPAYFQGAESVYLLLSCERVGNELVAVQDALQEPLANYSGLDLRALIINLGGLPSRH
SDICYTRNIFENDNHLVWNFEFYRIASITKNAQIDRDVLSSSMANLFSDFVSESSNGQYRVKEPRPVVQYRVEHDEPVASSAPSAWWQVLIGITTAILGAIIFFLWRCFLRAKRVKFQAKDSFPWFTTSGDDDSPPPPGDSPSRPPGRSPDRVLPRTVVRDLSFNDDDDLHSVDLNEAGSRFGEVVSLIA
RGNLRELAGAIPESLSNLTLLQTSASGSGFYTMVALYLATLGDAITAFHEHNDASPATIQSLRTLELQLEARGLRFNEAGTPANLIQRGVNSSVGRALVRLTQSALLATGENFRTRMATTLERIAAERLNTLTAYDQRVIEMTTELLAAIKPVLEVERSELTPHLANAEALLQVYNNLFSTDYVSASLLA
LRREMILRSAEGRVGEQPTSASDAANEELVQRSMTKLDKEIELFQAQIDSQRRAVTITEASNLRENILQPINTVANIAMAGAFLRGGARHRMPGMPDVATPMPNPFRAFSGRGHSLTTTRSGGLFRRPRV

Molecular weight: 98.25 kDa
Isoelectric point according different methods:

Protein with the highest isoelectric point:

>sp|Q9YJW3|POL1_BAYMY Genome polyprotein 1 

MEQTLAQAVSRRNKTDTPMAEERKHFSPMNFSANFVAPELFYSANVRKIKNIFKERSTTRFLDAISSDFELVAFLTLSPAHLMQLETVLRQEMRSCAVPIVTSDASFETVAVIKTALDGMRFHFGYTTLEKGWISMMRHAESCLQESSSSAVNDLQTPIKRVGSLLLSGKNRVEGCELSVLNLTARRFRI
EYGLNGTYFGEHVAMLRDLKRYIYGTVPKEFLWAKTKKHLPFTIPAWITRTPIDCFLFCLRVIPILHRFGVAMSLIYFSCVAALNFPAFMGFLFKRQFAKYLAHSFAKHSIYFMFLTIVAILWSFRTFTSQKPKIVLQARSTAEKEKKLMMILASVVGITYLFDYDIAEALGNCLHKISRLSSYLLDDHQ
GIASRMFGASYGLQAGDSAEDAVTTIISDLLSVTFKIVDEDASQGTVEDASETTFHSWVGVNTLAGRNMSRPLQYSVNKTYALTPQNVQLQARAMADANNCWSMVVGHTGSGKSTYLPVQYSNYLSTKSDRRQQILICEPTQAATENVCAGVAANLGRAVYGRHEGWSRMGDHCIQVMTYGSALQCHAMD
PSFISTFDAIFLDEAHDVKEHSLVFESICDTFKSVRKFYVSATPRDGSVCPEAARKYPLHVETSVCDSYRKFIAAQGGGDLLDISKHDTALVFLAGRPECIKAANAWNASVTGEKRAFSLSSDNFATDFSMLTERLKTHKTIIFTTNIIETGVTLSVDCVVDFGHTMRPCLDLNQKSLRLDRRKVTRNER
QQRIGPTGRLKDGYAIVCGDVDRAVNVISPDVLYGAALLSFKHNVPFYMNETFESSWLKGVTKAQADTMTIFKLPIFLTRDLINADGSVAKEFLDVLKKHQFTTSDIKQAPSITAKHIFPTWASYFSLHQALHYGDDKDEIPHELRYARVPFSVTTLSKFDWPALALACEKHRASMSNVFAGIEEPARVV
TLQTNPANIQASITHLMHMSKNYKTLIENNQHVRQSMMTNVMYKWFSSTRITKDLDRNLRRCTDNLAVVEATLSSLRQILAGNTQVHATPHMQSTLEDIIGLQASDTLTEESLASALGIFVPKSNLFLLLATKGFKLVYVICILLLVNLVYIGLRKWREHLKQKGSDEILTNTMPVSEGGEILAEVMKME
PKMRKNIKRDMDEAVESKLCGFTFVFPDDDKIGLEGKGNKYRPREDARLMYSTREDATFDAWNEKAKERRKKVTDKSEPELRRAYEKRPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADPNKDMNLVADKLRSFLDTKLVVGHHQRKLLEETAQVVIKDTKGTAHKMEISQHDPDCLKQNGSGKVGYPE
HRGQFRQEGVAITSDYDLGVEFGTDTDNITLEASTGILLSQVGVDVATRVGRISIGTFNMNCYFYNDWILVPGHLQDRSGNVTIQFPDQTVQTTTDALNANGVKRFYGLDVIAIRRPAILRPRTKLVKAFAIEEPVIAQMVFVDAQGVRKFTQSDWARKGENSGRWSHKISTVLGMCGCQFWTLERQIDG
IHVATNYTKKRNEFQPFTQEVVDFINGPGTKIPYCPWVFDRPACGYASHTALFEKPTTLTDVIHMQASDGLHNINNAIEGFGSSLRGQLVSPPTESTRQRFDKLFGSGSFELIGQMNKGLIDKHVIVGENDDVYDFMREHPTFTWLKDFMNEYAPSVLSYSAYYKDLCKYNRAKHVLTYNPEELHYATKG
LIKMLEDAGLTQGSVRTPQQVISDIQWNTSAGPSYQGKKRDLCAHLSDDEVLHLAEVCRQQFLEGKSTGVWNGSLKAELRTIEKVEPEKTRVFTASPITSLFAMKFYVDDFNKKFYATNLKAPHTVGINKFGRGWERLHDKLNRPGWLHGSGDGSRFDSSIDPFFFDVVKTIRKHFLPSEHHKAIDLIYD
EILNTTICLANGMVIKKNVGTQRQPSTVVDNTLVLMTAFLYAYIHKTGDRELALLNERFIFVCNGDDNKFAISPQFDEEFGHDFSPELVELGLTYEFDDITSDICENPYMSLTMVKTPFGVGFSLPVERIIAIMQWSKKGGVLHSYLAGISAIYESFNTPKLFKSIYAYLLWLTEEHEAEILAAMTQSST
ALPIPSMLDVYRLHYGDDEIWLQAADPLTDAQKEAAHTAAADRARLDLADADRRRKVEADRVEAARVKKAADAALKPVNLTATRMPTEDDGKLKTPSGARIPSSAADGNWSVPATKQVNAGLTLKIPLNKLKSVPKSVMEHNNSVALESELKAWTDAVRTSLGITTDEAWIDALIPFIGWCCNNGTSDKH
AENQVMQIDSGKGAVTEMSLSPFIVHARMNGGLRRIMRNYSDETVLLITNNKLVAHWSMKHGASANAKYAFDFFVPRSWMNPQDIEVSKQARLAALGTGTYNTMLTSDTTNLRKTTNHRVLDSDGHPELT

Molecular weight: 270.9 kDa
Isoelectric point according different methods:

General Statistics

Number of major isoforms	Number of additional isoforms	Number of all proteins	Number of amino acids	Min. Seq. Length	Max. Seq. Length	Avg. Seq. Length	Avg. Mol. Weight
2	0	2	3,300	890	2,410	1650.0	184.6 kDa

Amino acid frequency

Ala	Cys	Asp	Glu	Phe	Gly	His	Ile	Lys	Leu	Met	Asn	Gln	Pro	Arg	Ser	Thr	Val	Trp	Tyr
8.61	1.36	5.82	5.36	5.03	5.73	2.73	5.36	4.94	9.73	2.48	4.58	3.3	4.24	5.97	7.42	6.97	6.24	1.33	2.79

Note: For statistics only major isoforms were used (in this case 2 proteins)
For dipeptide frequency statistics click here

See this proteome in:

Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI: proteome isoelectric point database. Nucleic Acids Res. 2016. doi: 10.1093/nar/gkw978

Contact: Lukasz P. Kozlowski