========================================================================================= Proteome-pI - Proteome Isoelectric Point Database version 1.0 April 2016 AUTHOR: Lukasz Pawel Kozlowski, lukasz.kozlowski.lpk@gmail.com COPYRIGHTS: Lukasz Pawel Kozlowski LICENCE: http://http://isoelectricpointdb.org/licence.txt ========================================================================================= General description ========================================================================================= Proteome Isoelectric Point Database (Proteome-pI) is the collection of data gathering information about isoelectric points and molecular weights for model organism proteomes. Goals of the database include making statistical comparisons of the various prediction methods freely available to the prediction community (over ten algorithms implemented) as well as facilitating biological investigation of protein isoelectric point space. Isoelectric point, the pH at which a particular molecule carries no net electrical charge, is an critical parameter for many analytical biochemistry and proteomics techniques, especially for 2D gel electrophoresis (2D-PAGE), capillary isoelectric focusing (cIEF) and liquid chromatography-mass spectrometry (LC-MS). Methods ========================================================================================= Isoelectric points (pI) were predicted using following methods: IPC_peptide, IPC_protein, Bjellqvist, DTASelect, Dawson,EMBOSS, Grimsley, Lehninger, Nozaki, Patrickios, ProMoST, Rodwell, Sillero, Solomon, Thurlkill, Toseland, Wikipedia, Avg_pI Other databases ========================================================================================= Apart from proteomes pI was predicted for nr, UniProt and PDB proteins: Kozlowski, L. (2016) Isoelectric point for all nr (non redundant) NCBI proteins April 2016 http://isoelectricpointdb.org. RepOD. http://dx.doi.org/10.18150/repod.2872103 Kozlowski, L. (2016) Isoelectric point for all UniProtKB/TrEMBL proteins April 2016 http://isoelectricpointdb.org. RepOD. http://dx.doi.org/10.18150/repod.9948646 Kozlowski, L. (2016) Isoelectric point for PDB proteins Dec 2015 http://isoelectricpointdb.org. RepOD. http://dx.doi.org/10.18150/repod.1549954 Reference Proteomes ========================================================================================= pI was predicted for the proteomes as provided by UniProt database (Release 2016_04). Some proteomes have been (manually and algorithmically) selected as reference proteomes. They cover well-studied model organisms and other organisms of interest for biomedical research and phylogeny. Statistics (Total of species = 5029): #(1) Number of entries in main fasta (canonical) #(2) Number of entries in additional fasta (isoforms) #(3) Number of entries in gene2acc mapping file Proteome_ID Tax_ID OSCODE #(1) #(2) #(3) Species Name UP000034024 1309411 None 2921 14 2944 'Deinococcus soli' Cha et al. 2014 UP000050566 1123738 None 416 17 433 'Echinacea purpurea' witches'-broom phytoplasma UP000029777 1241371 ABHV 112 0 118 Abalone herpesvirus (isolate Abalone/Australia/Victoria/2009) (AbHV) UP000019050 592010 None 1937 6 1950 Abiotrophia defectiva ATCC 49176 UP000011083 1257118 None 14938 1 14974 Acanthamoeba castellanii str. Neff UP000001134 212035 MIMIV 909 0 911 Acanthamoeba polyphaga mimivirus (APMV) UP000000268 329726 ACAM1 7923 249 8383 Acaryochloris marina (strain MBIC 11017) UP000001619 522306 ACCPU 4396 42 4562 Accumulibacter phosphatis (strain UW-1) UP000032677 887700 None 3131 15 3146 Acetobacter aceti NBRC 14818 UP000032670 1231341 None 2553 8 2561 Acetobacter orientalis 21F-2 UP000032676 1231342 None 2659 8 2667 Acetobacter orleanensis JCM 7639 UP000000948 634452 ACEP3 2705 201 3049 Acetobacter pasteurianus (strain NBRC 3283 / LMG 1513 / CCTM 1153) UP000017992 1262684 None 1536 2 1538 Acetobacter sp. CAG:267 UP000018259 1262685 None 1766 9 1775 Acetobacter sp. CAG:977 UP000032666 1231343 None 2458 7 2465 Acetobacter syzygii 9H-2 UP000004319 749388 None 3524 14 3538 Acetobacter tropicalis NBRC 101654 UP000003292 1054213 None 5256 32 5289 Acetobacteraceae bacterium AT-5844 UP000036873 52689 None 3460 35 3498 Acetobacterium bakii UP000007177 931626 ACEWD 3430 15 3473 Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) UP000001661 574087 ACEAZ 2252 24 2282 Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) UP000003240 1009370 None 4256 27 4284 Acetonema longum DSM 6540 UP000032737 61635 None 1623 48 1690 Acholeplasma brassicae UP000008558 441768 ACHLI 1378 2 1380 Acholeplasma laidlawii (strain PG-8A) UP000032434 35623 None 1467 1 1471 Acholeplasma oculi UP000032740 1318466 ACHPJ 1391 42 1439 Acholeplasma palmae (strain ATCC 49389 / J233) UP000001573 46014 BPL2 14 0 14 Acholeplasma phage L2 (Bacteriophage L2) UP000017930 1262686 None 1143 2 1145 Acholeplasma sp. CAG:878 UP000036736 1604834 None 1169 4 1174 Achromatium sp. WMS1 UP000037003 1604835 None 2185 13 2203 Achromatium sp. WMS2 UP000036918 1604836 None 3081 18 3116 Achromatium sp. WMS3 UP000004510 742159 None 5602 153 5755 Achromobacter piechaudii ATCC 43553 UP000001902 591001 ACIFV 2005 11 2026 Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4) UP000007093 568816 ACIIR 2323 63 2404 Acidaminococcus intestini (strain RyC-MR95) UP000018048 1262688 None 1272 4 1276 Acidaminococcus sp. CAG:917 UP000000513 654911 ABVP 54 2 56 Acidianus bottle-shaped virus (isolate Italy/Pozzuoli) (ABV) UP000000514 654909 AFV1Y 40 0 40 Acidianus filamentous virus 1 (isolate United States/Yellowstone) (AFV-1) UP000006364 654910 AFV2P 52 0 52 Acidianus filamentous virus 2 (isolate Italy/Pozzuoli) (AFV-2) UP000008458 933801 ACIHW 2315 14 2329 Acidianus hospitalis (strain W1) UP000002150 315953 ATV 72 0 72 Acidianus two-tailed virus (ATV) UP000029273 160660 None 2436 249 2686 Acidihalobacter prosperus UP000000346 666510 ACIS3 1495 4 1499 Acidilobus saccharovorans (strain DSM 16705 / JCM 18335 / VKM B-2471 / 345-15) UP000050903 1655586 None 1612 8 1620 Acidimicrobiia bacterium BACL6 MAG-120910-bin40 UP000000771 525909 ACIFD 1924 11 1964 Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) UP000051003 1655575 None 1270 13 1284 Acidimicrobium sp. BACL17 MAG-120823-bin42 UP000051421 1655566 None 1085 4 1092 Acidimicrobium sp. BACL19 MAG-120924-bin39 UP000050870 1655564 None 1382 5 1417 Acidimicrobium sp. BACL27 MAG-120823-bin4 UP000000245 349163 ACICJ 3499 22 3559 Acidiphilium cryptum (strain JF-5) UP000018053 1262689 None 1476 3 1479 Acidiphilium sp. CAG:727 UP000050301 312540 None 1680 3 1683 Acidiplasma cupricumulans UP000032680 1231350 None 2776 12 2788 Acidisphaera rubrifaciens HS-AP3 UP000052054 1703384 None 2423 17 2440 Acidithiobacillales bacterium SM1_46 UP000006135 990288 ACICS 3035 27 3186 Acidithiobacillus caldus (strain SM-1) UP000029069 160808 None 3704 110 3856 Acidithiobacillus ferrivorans UP000001362 243159 ACIF2 3105 15 3147 Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)) UP000032360 1280514 None 3544 4 3651 Acidithrix ferrooxidans UP000002207 240015 ACIC5 3351 12 3382 Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 / NBRC 15755 / NCIMB 13165 / 161) UP000032668 1120923 None 3727 24 3751 Acidocella aminolytica 101 = DSM 11237 UP000006217 1214225 None 3476 30 3506 Acidocella sp. MX-AZ02 UP000019760 1231351 None 3252 18 3270 Acidomonas methanolica NBRC 104435 UP000008221 351607 ACIC1 2146 11 2157 Acidothermus cellulolyticus (strain ATCC 43068 / 11B) UP000002596 397945 ACIAC 4592 10 4709 Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp. citrulli) UP000003856 573060 None 4880 10 4891 Acidovorax delafieldii 2AN UP000000645 232721 ACISJ 4032 13 4155 Acidovorax sp. (strain JS42) UP000004811 1144317 None 6691 30 6724 Acidovorax sp. CF316 UP000006306 358220 None 4672 24 4742 Acidovorax sp. KKS102 UP000051403 1736280 None 3923 12 3935 Acidovorax sp. Leaf160 UP000030646 1268622 None 4744 18 4762 Acidovorax sp. MR-S7 UP000003485 512030 None 4648 29 4679 Acidovorax sp. NO-1 UP000032566 80878 None 3735 15 3750 Acidovorax temperans UP000001400 439481 ACIB4 1532 7 2778 Aciduliprofundum boonei (strain DSM 19572 / T469) UP000001741 509170 ACIBS 2747 20 2975 Acinetobacter baumannii (strain SDF) UP000000430 62977 ACIAD 3230 33 3277 Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) UP000018418 1341683 None 2915 12 2938 Acinetobacter brisouii CIP 110357 UP000013117 1120926 None 4155 19 4254 Acinetobacter gerneri DSM 14967 = CIP 107464 UP000013121 1217655 None 4569 25 4613 Acinetobacter guillouiae CIP 63.46 UP000017667 1217659 None 3177 8 3322 Acinetobacter haemolyticus CIP 64.3 UP000023785 1392540 None 2527 14 2549 Acinetobacter nectaris CIP 110549 UP000018419 596318 None 3150 37 3188 Acinetobacter radioresistens SK82 UP000014568 421052 None 3597 12 3621 Acinetobacter rudis CIP 110305 UP000018341 1262690 None 2078 7 2086 Acinetobacter sp. CAG:196 UP000032870 1509403 None 2926 8 2935 Acinetobacter sp. HR7 UP000023816 466088 None 3063 14 3080 Acinetobacter sp. Ver3 UP000016201 1120927 None 3849 18 3934 Acinetobacter tandoii DSM 14970 = CIP 107469 UP000029964 857340 ACRC1 8899 0 8900 Acremonium chrysogenum (strain ATCC 11550 / CBS 779.69 / DSM 880 / JCM 23072 / IMI 49137) UP000007755 103372 ACREC 13956 6 14049 Acromyrmex echinatior (Panamanian leafcutter ant) (Acromyrmex octospinosus echinatior) UP000024836 1461693 None 3107 19 3129 Actibacterium atlanticum UP000026249 1454373 None 3600 16 3617 Actibacterium mucosum KCTC 23349 UP000001432 416269 ACTP2 1977 27 2012 Actinobacillus pleuropneumoniae serotype 5b (strain L20) UP000001114 339671 ACTSZ 2068 9 2079 Actinobacillus succinogenes (strain ATCC 55618 / 130Z) UP000051188 1655602 None 994 5 1004 Actinobacteria bacterium BACL2 MAG-120920-bin34 UP000051564 1655610 None 1091 6 1106 Actinobacteria bacterium BACL4 MAG-120507-bin0 UP000036180 1641811 None 2950 25 2975 Actinobacteria bacterium IMCC26207 UP000035517 1650658 None 2283 16 2299 Actinobacteria bacterium IMCC26256 UP000037912 1592326 None 10702 112 10849 Actinobacteria bacterium OK006 UP000037991 1592327 None 9051 86 9141 Actinobacteria bacterium OK074 UP000037870 1592329 None 8959 97 9077 Actinobacteria bacterium OV320 UP000037826 1592328 None 8378 68 8470 Actinobacteria bacterium OV450 UP000009888 883066 None 1687 9 1697 Actinobaculum massiliense ACS-171-V-Col2 UP000016495 1227261 None 2310 10 2320 Actinobaculum sp. oral taxon 183 str. F0552 UP000037036 1657 None 1642 11 1654 Actinobaculum suis UP000019277 909613 None 6569 41 6629 Actinokineospora spheciospongiae UP000013015 888050 None 1979 4 1983 Actinomyces cardiffensis F0333 UP000010301 525245 None 1533 13 1546 Actinomyces coleocanis DSM 15436 UP000003822 435830 None 1845 7 1853 Actinomyces graevenitzii C83 UP000002941 1125718 None 3119 10 3129 Actinomyces massiliensis F0489 UP000006075 888439 None 1926 8 1935 Actinomyces neuii BVS029A5 UP000035029 1219581 None 1438 9 1447 Actinomyces sp. S4-C9 UP000029604 1284680 None 1749 13 1763 Actinomyces sp. S6-Spd3 UP000005722 706439 None 3121 28 3149 Actinomyces sp. oral taxon 171 str. F0337 UP000004281 944560 None 2628 10 2643 Actinomyces sp. oral taxon 175 str. F0384 UP000003389 888051 None 2519 5 2524 Actinomyces sp. oral taxon 178 str. F0338 UP000006252 888052 None 2061 9 2070 Actinomyces sp. oral taxon 180 str. F0310 UP000005351 888056 None 2513 5 2518 Actinomyces sp. oral taxon 448 str. F0400 UP000003063 649743 None 2575 16 2592 Actinomyces sp. oral taxon 848 str. F0332 UP000003994 883077 None 1699 10 1717 Actinomyces turicensis ACS-279-V-Col4 UP000004778 525246 None 2376 18 2394 Actinomyces urogenitalis DSM 15434 UP000017746 1246995 None 8491 67 8565 Actinoplanes friuliensis DSM 7358 UP000007882 512565 ACTM4 8049 64 8125 Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) UP000005440 134676 ACTS5 7850 399 8256 Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) UP000013541 649831 None 8132 79 8212 Actinoplanes sp. N902-109 UP000029737 414996 None 3940 32 3972 Actinopolyspora erythraea UP000019485 479430 None 191 0 191 Actinospica robiniae DSM 44927 UP000002213 446462 ACTMD 6865 47 6916 Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) UP000029877 862422 None 3357 18 3375 Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133 UP000019753 948458 None 3534 24 3558 Actinotalea ferrariae CF5-4 UP000035032 59505 None 1439 4 1444 Actinotignum schaalii UP000006040 1217067 ABPVR 3 0 3 Acute bee paralysis virus (strain Rothamsted) (ABPV) UP000007819 7029 ACYPI 35518 300 36197 Acyrthosiphon pisum (Pea aphid) UP000008469 648242 AAV2S 6 2 8 Adeno-associated virus 2 (isolate Srivastava/1982) (AAV-2) UP000015924 1384484 None 2266 15 2281 Adlercreutzia equolifaciens DSM 19450 UP000005267 1036672 ADVKW 3897 36 3933 Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) (Tetrathiobacter kashmirensis) UP000019095 1247726 None 4067 5 4084 Advenella mimigardefordensis DPN7 UP000008820 7159 AEDAE 15349 1327 17389 Aedes aegypti (Yellowfever mosquito) (Culex aegypti) UP000008472 648330 AADNV 3 0 3 Aedes albopictus densovirus (isolate Boublik/1994) (AalDNV) UP000001676 648170 APRVF 9 0 9 Aedes pseudoscutellaris reovirus (isolate France) (ApRV) UP000006049 746697 AEQSU 3123 11 3140 Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) UP000008129 866775 AERUA 1650 34 1726 Aerococcus urinae (strain ACS-120-V-Col10a) UP000003764 655812 None 1885 44 1929 Aerococcus viridans ATCC 11563 = CCUG 4311 UP000003111 585531 None 3042 35 3081 Aeromicrobium marinum DSM 15272 UP000051702 1736521 None 3703 35 3738 Aeromicrobium sp. Root344 UP000050971 1736540 None 3486 37 3523 Aeromicrobium sp. Root472D3 UP000051970 1736550 None 3396 26 3423 Aeromicrobium sp. Root495 UP000023775 1268237 None 3684 23 3709 Aeromonas diversa CDC 2478-85 UP000000756 380703 AERHH 4112 9 4122 Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / JCM 1027 / KCTC 2358 / NCIMB 9240) UP000002518 272557 AERPE 1679 21 1700 Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) UP000011271 1289471 APBV1 14 0 14 Aeropyrum pernix bacilliform virus 1 (isolate -/Japan/Tanaka/2005) (APBV1) UP000008911 1032474 APOV1 21 0 21 Aeropyrum pernix ovoid virus 1 (APOV1) UP000018975 1429916 None 4739 30 4772 Afipia sp. P52-10 UP000051348 1736436 None 4369 28 4397 Afipia sp. Root123D2 UP000000624 10498 ASFB7 150 0 156 African swine fever virus (strain Badajoz 1971 Vero-adapted) (Ba71V) (ASFV) UP000008493 597362 AGABU 11202 9 11278 Agaricus bisporus var. burnettii (strain JB137-S8 / ATCC MYA-4627 / FGSC 10392) (White button mushroom) UP000014461 1331007 None 4381 16 4397 Agarivorans albus MKT 106 UP000001477 515619 AGARV 3516 29 3626 Agathobacter rectalis (strain ATCC 33656 / DSM 3377 / JCM 17463 / KCTC 5835 / VPI 0990) (Eubacterium rectale) UP000002569 668336 AGGAD 2274 2 2279 Aggregatibacter actinomycetemcomitans serotype C (strain D11S-1) (Actinobacillus actinomycetemcomitans) UP000032503 110935 None 3092 17 3111 Agreia bicolorata UP000007123 1156935 None 4775 36 4811 Agrobacterium albertimagni AOL15 UP000000813 176299 AGRFC 5035 309 5353 Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58)) UP000001600 311403 AGRRK 6221 453 6683 Agrobacterium radiobacter (strain K84 / ATCC BAA-868) UP000001596 311402 AGRVS 4831 522 5389 Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis (strain S4)) UP000016462 1330458 None 2763 13 2782 Agrococcus pavilionensis RW1 UP000050813 1735688 None 3691 17 3708 Agromyces sp. Leaf222 UP000051559 1736467 None 3496 19 3515 Agromyces sp. Root1464 UP000051793 1736390 None 4284 24 4308 Agromyces sp. Soil535 UP000038011 1514904 None 3150 11 3162 Ahrensia marina UP000003904 744979 None 3619 3 3624 Ahrensia sp. R2A130 UP000000406 650132 AIVA8 1 0 1 Aichi virus (strain Human/A846/88/1989) (AiV) (Aichi virus (strain A846/88)) UP000008912 9646 AILME 19246 1893 21176 Ailuropoda melanoleuca (Giant panda) UP000001631 447093 AJECG 9214 0 9254 Ajellomyces capsulatus (strain G186AR / H82 / ATCC MYA-2454 / RMSCC 2432) (Darling's disease fungus) (Histoplasma capsulatum) UP000002624 544712 AJECH 9545 0 9547 Ajellomyces capsulatus (strain H143) (Darling's disease fungus) (Histoplasma capsulatum) UP000008142 544711 AJEC8 9445 0 9445 Ajellomyces capsulatus (strain H88) (Darling's disease fungus) (Histoplasma capsulatum) UP000009297 339724 AJECN 9252 0 9313 Ajellomyces capsulatus (strain NAm1 / WU24) (Darling's disease fungus) (Histoplasma capsulatum) UP000007802 653446 AJEDA 10178 501 10687 Ajellomyces dermatitidis (strain ATCC 18188 / CBS 674.68) (Blastomyces dermatitidis) UP000002039 559297 AJEDR 9539 0 9539 Ajellomyces dermatitidis (strain ER-3 / ATCC MYA-2586) (Blastomyces dermatitidis) UP000001031 349741 AKKM8 2127 10 2138 Akkermansia muciniphila (strain ATCC BAA-835 / Muc) UP000016497 1386079 None 3963 28 3991 Alcaligenes sp. EGD-AK7 UP000008871 393595 ALCBS 2699 53 2755 Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) UP000006286 930169 ALCDB 4316 72 4417 Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) UP000006764 391936 None 3673 13 3702 Alcanivorax pacificus W11-5 UP000000941 654901 ALHV1 70 0 70 Alcelaphine herpesvirus 1 (strain C500) (AlHV-1) (Malignant catarrhal fever virus) UP000008470 10783 ADVG 4 1 5 Aleutian mink disease parvovirus (strain G) (ADV) UP000000358 12322 AMVLE 4 0 4 Alfalfa mosaic virus (strain 425 / isolate Leiden) UP000029644 221126 None 4597 12 5405 Algibacter lectus UP000003919 388413 None 3920 12 3936 Algoriphagus machipongonensis UP000050421 1305737 None 3513 1 3514 Algoriphagus marincola HL-49 UP000007938 596154 ALIDK 4600 20 4696 Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) UP000001917 521098 ALIAD 3044 15 3084 Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / JCM 5260 / NBRC 15652 / NCIMB 11725 / NRRL B-14509 / 104-1A) (Bacillus acidocaldarius) UP000015607 1356854 None 4071 31 4103 Alicyclobacillus acidoterrestris ATCC 49025 UP000050482 471514 None 4106 36 4147 Alicyclobacillus ferrooxydans UP000035011 1200346 None 2911 11 2922 Alicyclobacillus hesperidum URH17-3-68 UP000006334 1127673 None 4126 201 4329 Aliiglaciecola lipolytica E3 UP000050471 154981 None 3450 15 3490 Aliiroseovarius crassostreae UP000035062 1195246 None 3137 15 3159 Alishewanella agri BL06 UP000006008 742725 None 2344 4 2348 Alistipes indistinctus YIT 12060 UP000018026 1263036 None 1909 4 1913 Alistipes putredinis CAG:67 UP000008794 717959 None 2559 4 2563 Alistipes shahii WAL 8301 UP000018346 1262692 None 1826 2 1828 Alistipes sp. CAG:157 UP000018329 1262693 None 2192 8 2200 Alistipes sp. CAG:268 UP000018138 1262694 None 2576 5 2584 Alistipes sp. CAG:29 UP000017965 1262695 None 2278 8 2286 Alistipes sp. CAG:435 UP000018094 1262698 None 2175 4 2179 Alistipes sp. CAG:831 UP000020164 1229520 None 2162 20 2182 Alkalibacterium sp. AK22 UP000001962 187272 ALKEH 2855 7 2865 Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) UP000001572 293826 ALKMQ 4431 36 4625 Alkaliphilus metalliredigens (strain QYMF) UP000000269 350688 ALKOO 2805 23 2836 Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii (strain OhILAs)) UP000050525 8496 ALLMI 23168 7695 30864 Alligator mississippiensis (American alligator) UP000001441 572477 ALLVD 3179 32 3220 Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) (Chromatium vinosum) UP000009875 883081 None 1621 6 1630 Alloiococcus otitis ATCC 51267 UP000015993 679199 None 2004 5 2012 Alloprevotella rava F0323 UP000003460 626522 None 2781 25 2811 Alloprevotella tannerae ATCC 51259 UP000016519 1321816 None 1646 3 1649 Alloscardovia omnicolens F0580 UP000029741 1552985 AMV79 7 0 7 Alphamesonivirus 1 (isolate Aedes harrisoni/Cote d'Ivoire/C79/2004) UP000034392 1267766 None 3254 0 3295 Altererythrobacter atlanticus UP000037643 543877 None 2650 9 2660 Altererythrobacter marensis UP000051125 1736584 None 3438 16 3454 Altererythrobacter sp. Root672 UP000001870 1774373 ALTMD 3924 14 3970 Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype) UP000000683 715451 ALTSS 4324 18 4371 Alteromonas sp. (strain SN2) UP000037939 857265 None 4365 3 4368 Amantichitinum ursilacus UP000051836 12930 AMAAE 16089 3 16106 Amazona aestiva (Blue-fronted Amazon parrot) UP000017836 13333 AMBTC 27362 9 27399 Amborella trichopoda UP000051834 1736420 None 4804 47 4851 Aminobacter sp. Root100 UP000002366 572547 AMICL 1859 13 1876 Aminobacterium colombiense (strain DSM 12261 / ALA-1) UP000005096 584708 None 2370 21 2399 Aminomonas paucivorans DSM 12260 UP000002620 429009 AMMDK 2066 11 2080 Ammonifex degensii (strain DSM 10501 / KC4) UP000001227 452471 AMOA5 1251 2 1336 Amoebophilus asiaticus (strain 5a2) UP000006294 698758 AMPXN 2353 31 2411 Amphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG 17667 / NBRC 15112 / Ep01) UP000007879 400682 AMPQE 29530 228 29880 Amphimedon queenslandica (Sponge) UP000000872 28321 AMEPV 278 0 278 Amsacta moorei entomopoxvirus (AmEPV) UP000006138 713604 AMYMS 9528 23 9581 Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei) UP000013968 1156913 None 7311 850 8162 Amycolatopsis orientalis HCCB10007 UP000009235 443218 AMYSD 4673 30 4705 Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) UP000010474 272123 ANACC 5744 53 5838 Anabaena cylindrica (strain ATCC 27899 / PCC 7122) UP000010101 46234 None 4355 121 4511 Anabaena sp. 90 UP000035996 157733 None 3932 41 3973 Anaerobacillus macyae UP000006061 891968 ANAMD 1990 14 2017 Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) UP000005984 525254 None 2226 26 2253 Anaerococcus lactolyticus ATCC 51172 UP000002294 525919 ANAPD 1788 7 1806 Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1) (Peptostreptococcus prevotii) (Peptococcus prevotii) UP000003821 655811 None 1732 32 1764 Anaerococcus vaginalis ATCC 51170 UP000005178 445971 None 2304 27 2331 Anaerofustis stercorihominis DSM 17244 UP000005481 861450 None 2144 4 2148 Anaeroglobus geminatus F0357 UP000008922 926569 ANATU 3047 63 3167 Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) UP000050892 1703386 None 3678 34 3712 Anaerolineae bacterium SG8_19 UP000051685 1703387 None 3326 43 3370 Anaerolineae bacterium SM23_ 63 UP000052016 1703388 None 2856 58 2914 Anaerolineae bacterium SM23_84 UP000001935 290397 ANADE 4322 23 4346 Anaeromyxobacter dehalogenans (strain 2CP-C) UP000006382 404589 ANADF 4426 35 4466 Anaeromyxobacter sp. (strain Fw109-5) UP000008960 649756 ANAHA 2752 19 2771 Anaerostipes hadrus UP000018135 1262699 None 3106 35 3143 Anaerostipes sp. CAG:276 UP000003803 445972 None 4353 68 4425 Anaerotruncus colihominis DSM 17241 UP000018385 1262703 None 2233 4 2237 Anaerotruncus sp. CAG:390 UP000018024 1262700 None 1701 4 1705 Anaerotruncus sp. CAG:528 UP000014129 1235835 None 3394 12 3455 Anaerotruncus sp. G3(2012) UP000030993 82374 None 2426 11 2439 Anaerovibrio lipolyticus UP000007307 320483 ANAMF 919 20 942 Anaplasma marginale (strain Florida) UP000001943 212042 ANAPZ 1312 18 1352 Anaplasma phagocytophilum (strain HZ) UP000016666 8839 ANAPL 15553 825 16399 Anas platyrhynchos (Mallard) (Anas boschas) UP000027821 1048983 None 4323 18 4341 Anditalea andensis UP000037269 47500 ANEMI 5626 23 5705 Aneurinibacillus migulanus (Bacillus migulanus) UP000035642 6313 ANGCA 11964 16 11980 Angiostrongylus cantonensis (Rat lungworm) UP000050601 334426 ANGCS 9959 9 9968 Angiostrongylus costaricensis (Nematode worm) UP000015341 59799 None 14524 0 16888 Angomonas deanei UP000011239 1283343 ANHV1 128 1 134 Anguillid herpesvirus 1 (isolate Anguilla anguilla/Netherlands/500138/1998) (AngHV-1) (European eel herpesvirus) UP000051170 1736539 None 3463 32 3495 Angustibacter sp. Root456 UP000036680 6269 ANISI 20041 22 20063 Anisakis simplex (Herring worm) UP000030655 1288291 None 3576 0 3598 Anncaliia algerae PRA339 UP000001646 28377 ANOCA 18487 623 19181 Anolis carolinensis (Green anole) (American chameleon) UP000000673 43151 ANODA 10439 8 10457 Anopheles darlingi (Mosquito) UP000007062 7165 ANOGA 11988 1093 13788 Anopheles gambiae (African malaria mosquito) UP000030765 74873 ANOSI 19339 4 19352 Anopheles sinensis (Mosquito) UP000031249 33934 None 472 1 478 Anoxybacillus flavithermus UP000000742 491915 ANOFW 2730 89 2832 Anoxybacillus flavithermus (strain DSM 21510 / WK1) UP000030702 1548750 None 4426 1 4427 Anoxybacillus sp. BCO1 UP000019040 112090 None 19020 5960 25079 Aphanomyces astaci UP000024375 157072 None 15212 4381 19629 Aphanomyces invadans UP000005203 7460 APIME 15147 177 15366 Apis mellifera (Honeybee) UP000007025 73473 ACLSP 3 0 3 Apple chlorotic leaf spot virus (isolate plum P863) (ACLSV) UP000000396 36402 ASGVP 2 0 2 Apple stem grooving virus (strain P-209) (ASGV) UP000000678 651356 ASPVP 5 0 5 Apple stem pitting virus (isolate PA66) (ASPV) UP000029993 1538295 None 3594 26 3632 Aquabacterium sp. NJ1 UP000029755 1554492 AQUAV 1 0 1 Aquamavirus A (isolate Phoca hispida/Canada/HO.02.21/2002) UP000019849 69279 None 4417 37 4456 Aquamicrobium defluvii UP000006713 185783 AQRVC 12 0 12 Aquareovirus C (isolate Golden shiner/USA/GSRV/1977) (AQRV-C) UP000001674 648234 AQRVG 12 0 12 Aquareovirus G (isolate American grass carp/USA/PB01-155/-) (AQRV-G) UP000000798 224324 AQUAE 1552 1 1557 Aquifex aeolicus (strain VF5) UP000023541 1317122 None 4765 21 4786 Aquimarina atlantica UP000033764 332411 None 4082 21 4103 Aquitalea magnusonii UP000008694 81972 ARALL 32047 66 32551 Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress) UP000006548 3702 ARATH 27064 6381 33583 Arabidopsis thaliana (Mouse-ear cress) UP000029120 50452 ARAAL 21559 1686 23280 Arabis alpina (Alpine rock-cress) UP000000376 644284 ARCHD 1707 10 1731 Arcanobacterium haemolyticum (strain ATCC 9345 / DSM 20595 / NBRC 15585 / NCTC 8452 / 11018) UP000002199 224325 ARCFU 2396 4 2410 Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) UP000001901 572546 ARCPA 1813 9 1823 Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) UP000013307 387631 None 2203 10 2216 Archaeoglobus sulfaticallidus PM70-1 UP000008136 693661 ARCVS 2049 16 2090 Archaeoglobus veneficus (strain DSM 11195 / SNP6) UP000035579 48 None 10057 53 10121 Archangium gephyra UP000001136 367737 ARCB4 2245 9 2259 Arcobacter butzleri (strain RM4018) UP000000939 572480 ARCNC 3109 16 3126 Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) (Campylobacter nitrofigilis) UP000014174 1150600 None 4282 27 4309 Arcticibacter svalbardensis MN12-7 UP000037784 872965 None 2965 179 4786 Ardenticatena maritima UP000029391 1121013 None 2846 3 2849 Arenimonas composti TR7-09 = DSM 18010 UP000029085 1121014 None 2682 3 2685 Arenimonas donghaensis DSM 18148 = HO3-R19 UP000029385 1121015 None 2892 5 2897 Arenimonas oryziterrae DSM 21050 = YC6267 UP000051026 1640515 None 2575 32 2607 Armatimonadetes bacterium CSP1-3 UP000006552 76114 AROAE 4215 268 4584 Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)) UP000034895 1632859 None 3306 23 3330 Arsukibacterium sp. MJ3 UP000006878 861360 ARTAR 3288 92 3436 Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) UP000000637 290340 ARTAT 4445 120 4588 Arthrobacter aurescens (strain TC1) UP000002505 452863 ARTCA 4561 26 4590 Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM 12360 / NCIMB 13794 / A6) UP000010729 1246476 None 4087 31 4118 Arthrobacter crystallopoietes BAB-32 UP000012015 1276920 None 4009 8 4017 Arthrobacter gangotriensis Lz1y UP000003828 1077972 None 4303 221 4529 Arthrobacter globiformis NBRC 12137 UP000011189 683150 None 3610 23 3634 Arthrobacter nitrophenolicus UP000035722 861266 None 4139 335 4475 Arthrobacter siccitolerans UP000000754 290399 ARTS2 4426 27 4506 Arthrobacter sp. (strain FB24) UP000031809 1349820 None 3992 28 4020 Arthrobacter sp. AK-YN10 UP000037466 1588022 None 3763 4 3767 Arthrobacter sp. Hiyo6 UP000051467 1736232 None 3560 24 3584 Arthrobacter sp. Leaf69 UP000030301 1494608 None 4322 23 4366 Arthrobacter sp. PAMC25486 UP000051775 1736395 None 5003 34 5037 Arthrobacter sp. Soil736 UP000051715 1736401 None 3980 21 4001 Arthrobacter sp. Soil762 UP000037645 1652545 None 3424 15 6468 Arthrobacter sp. YC-RL1 UP000036861 1676590 None 3632 19 3652 Arthrobacter sp. ZBG10 UP000008784 756982 ARTOA 11478 0 11479 Arthrobotrys oligospora (strain ATCC 24927 / CBS 115.81 / DSM 1491) (Nematode-trapping fungus) (Didymozoophaga oligospora) UP000008866 663331 ARTBC 7976 0 7982 Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) (Trichophyton mentagrophytes) UP000002669 535722 ARTGP 8921 0 8921 Arthroderma gypseum (strain ATCC MYA-4604 / CBS 118893) (Microsporum gypseum) UP000002035 554155 ARTOC 8764 0 8765 Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) (Microsporum canis) UP000001636 1029718 ARTSS 1482 5 1491 Arthromitus sp. (strain SFB-mouse-Japan) UP000006803 696747 ARTPN 5918 91 6630 Arthrospira platensis (strain NIES-39 / IAM M-135) (Spirulina platensis) UP000027583 1382230 None 3259 14 3273 Asaia platycodi SF2.1 UP000036681 6252 ASCLU 18547 12 18559 Ascaris lumbricoides (Giant roundworm) UP000017900 6253 ASCSU 9196 17 9213 Ascaris suum (Pig roundworm) (Ascaris lumbricoides) UP000000591 284811 ASHGO 4758 2 4785 Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (Yeast) (Eremothecium gossypii) UP000006701 344612 ASPCL 9140 0 9140 Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) UP000001875 332952 ASPFN 13498 3 13501 Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) UP000032444 1392242 None 8428 3 8431 Aspergillus flavus AF70 UP000006812 1033177 ASPKW 11484 7 11491 Aspergillus kawachii (strain NBRC 4308) (White koji mold) (Aspergillus awamori var. kawachi) UP000051487 293939 None 9662 2 9680 Aspergillus lentulus UP000009038 380704 ASPNA 10943 6 10949 Aspergillus niger (strain ATCC 1015 / CBS 113.46 / FGSC A1144 / LSHB Ac4 / NCTC 3858a / NRRL 328 / USDA 3528.7) UP000006706 425011 ASPNC 14064 4 14077 Aspergillus niger (strain CBS 513.88 / FGSC A1513) UP000037505 1509407 None 11909 5 11914 Aspergillus nomius NRRL 13137 UP000006564 510516 ASPOR 12069 3 12096 Aspergillus oryzae (strain ATCC 42149 / RIB 40) (Yellow koji mold) UP000033540 1403190 ASPPU 8641 4 8645 Aspergillus parasiticus (strain ATCC 56775 / NRRL 5862 / SRRC 143 / SU-1) UP000034291 308745 None 7759 2 7761 Aspergillus rambellii UP000019804 1388766 None 10052 1 10066 Aspergillus ruber CBS 135680 UP000007963 341663 ASPTN 10414 2 10418 Aspergillus terreus (strain NIH 2624 / FGSC A1156) UP000017837 1121022 None 4604 13 4619 Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 UP000006512 715226 None 4697 15 4712 Asticcacaulis biprosthecum C19 UP000001492 573065 ASTEC 3737 6 3763 Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) UP000017826 1282362 None 4264 12 4277 Asticcacaulis sp. AC466 UP000018467 7994 ASTMX 22979 690 23695 Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus) UP000001405 1453429 ATETH 1185 14 1200 Atelocyanobacterium thalassa (isolate ALOHA) UP000001673 647331 AHV2H 2 0 2 Atkinsonella hypoxylon virus (isolate 2H) (AhV) UP000011243 1283346 ASPVR 6 3 9 Atlantic salmon paramyxovirus (isolate -/Norway/Yrkje371/1995) (ASPV) UP000012651 997872 None 1536 3 1539 Atopobium minutum 10063974 UP000000960 521095 ATOPD 1350 3 1353 Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus) UP000004070 553184 None 1537 11 1548 Atopobium rimae ATCC 49626 UP000005947 525256 None 1234 9 1244 Atopobium vaginae DSM 15829 UP000004431 866774 None 1209 8 1217 Atopobium vaginae PB189-T1-4 UP000005205 12957 ATTCE 18040 40 18088 Atta cephalotes (Leafcutter ant) UP000000321 287752 AURMS 3615 10 3649 Aurantimonas manganoxydans (strain ATCC BAA-1229 / DSM 21871 / SI85-9A1) UP000051458 1736378 None 3425 14 3439 Aurantimonas sp. Leaf443 UP000011261 1289385 AURN1 1 0 1 Aurantiochytrium single-stranded RNA virus 01 (isolate -/Japan/AuRNAV01/2000) (AuRNAV01) (Schizochytrium single-stranded RNA virus) UP000030826 370622 None 3494 25 3523 Aureimonas altamirensis UP000050862 1736336 None 3962 27 3989 Aureimonas sp. Leaf324 UP000051585 1736381 None 4197 21 4218 Aureimonas sp. Leaf454 UP000051159 1736384 None 4760 34 4794 Aureimonas sp. Leaf460 UP000030672 1043003 None 10582 1 10584 Aureobasidium melanogenum CBS 110374 UP000027730 1043004 None 10257 1 10259 Aureobasidium namibiae CBS 147.97 UP000030706 1043002 None 11842 2 11844 Aureobasidium pullulans EXF-150 UP000030641 1043005 None 10790 2 10792 Aureobasidium subglaciale EXF-2481 UP000002729 44056 AURAN 11501 0 11625 Aureococcus anophagefferens (Harmful bloom alga) UP000006514 717982 AURST 5290 0 5306 Auricularia subglabra (strain TFB-10046 / SS5) (White-rot fungus) (Auricularia delicata (strain TFB10046)) UP000006934 446561 ABLVB 5 2 7 Australian bat lyssavirus (isolate Bat/AUS/1996) (ABLV) UP000008495 1184607 None 2989 59 3048 Austwickia chelonae NBRC 105200 UP000028924 3075 AUXPR 6999 2 7021 Auxenochlorella protothecoides (Green microalga) (Chlorella protothecoides) UP000000357 475778 AEVCA 1 0 1 Avian encephalomyelitis virus (strain Calnek vaccine) (AEV) UP000006717 11122 IBVB 10 0 10 Avian infectious bronchitis virus (strain Beaudette) (IBV) UP000007249 644440 IBDVU 3 0 3 Avian infectious bursal disease virus (isolate Chicken/UK/UK661/1989) (IBDV) (Gumboro disease virus) UP000002238 269446 RSVSA 4 0 4 Avian leukosis virus RSA (RSV-SRA) (Rous sarcoma virus (strain Schmidt-Ruppin A)) UP000002471 652954 AMPV1 9 0 9 Avian metapneumovirus (isolate Canada goose/Minnesota/15a/2001) (AMPV) UP000033614 728 AVIPA 2167 4 2589 Avibacterium paragallinarum (Haemophilus gallinarum) UP000015362 1351754 None 219 2420 2935 Avibacterium paragallinarum JF4211 UP000029754 1554484 AVISV 1 0 1 Avisivirus A (isolate Turkey/USA/USA-IN1/2010) UP000002588 62928 AZOSB 3970 11 3989 Azoarcus sp. (strain BH72) UP000007106 748247 None 4671 505 5188 Azoarcus sp. KH32C UP000000723 511995 AZOPC 845 2 852 Azobacteroides pseudotrichonymphae genomovar. CFP2 UP000000270 438753 AZOC5 4446 262 4717 Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) UP000007319 1064539 None 7369 172 7559 Azospirillum brasilense Sp245 UP000005667 862719 AZOL4 6019 43 6098 Azospirillum lipoferum (strain 4B) UP000018213 1262705 None 1787 4 1791 Azospirillum sp. CAG:239 UP000018110 1262706 None 1758 4 1762 Azospirillum sp. CAG:260 UP000002424 322710 AZOVD 4944 46 5051 Azotobacter vinelandii (strain DJ / ATCC BAA-1303) UP000033188 5866 BABBI 4432 0 4459 Babesia bigemina UP000002173 5865 BABBO 3688 2 3706 Babesia bovis UP000002899 1133968 None 1528 0 1531 Babesia microti strain RI UP000031563 1123719 None 3981 35 4106 Bacillaceae bacterium MTCC 8252 UP000034981 1637974 None 3201 30 3254 Bacilli bacterium VT-13-104 UP000018896 1236973 BACA3 4667 43 4711 Bacillus akibai (strain ATCC 43226 / DSM 21942 / JCM 9157 / 1139) UP000002754 1218173 None 3703 40 3745 Bacillus alcalophilus ATCC 27647 = CGMCC 1.3604 UP000000594 1392 BACAN 5252 241 13881 Bacillus anthracis UP000006315 1131731 None 4136 71 4226 Bacillus azotoformans LMG 9581 UP000031982 1455 BACBA 4449 30 4486 Bacillus badius UP000006316 1117379 None 5123 83 5207 Bacillus bataviensis LMG 21833 UP000001401 649639 BACCJ 4220 33 4268 Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) UP000001417 226900 BACCR 5222 18 5255 Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711) UP000001384 526988 None 2821 20 2841 Bacillus cereus Rock4-18 UP000028549 265729 None 3749 32 3781 Bacillus cibi UP000036045 1397 BACCI 4884 65 4950 Bacillus circulans UP000001168 66692 BACSK 4065 17 4087 Bacillus clausii (strain KSM-K16) UP000009283 345219 None 3257 18 3290 Bacillus coagulans 36D1 UP000036202 135735 None 4466 65 4532 Bacillus endophyticus UP000030588 363870 None 2887 27 2916 Bacillus ginsengihumi UP000001258 272558 BACHD 3992 14 4066 Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) UP000018895 1236971 None 4320 25 4345 Bacillus hemicellulosilyticus JCM 9152 UP000017805 1367477 None 5023 43 5066 Bacillus infantis NRRL B-14911 UP000037558 284581 None 4361 41 4403 Bacillus koreensis UP000027142 1246626 None 3996 20 4017 Bacillus lehensis G1 UP000000606 279010 BACLD 4142 22 4744 Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 / NCIMB 9375 / NRRL NRS-1264 / Gibson 46) UP000027822 574376 None 4321 53 4375 Bacillus manliponensis UP000037405 189381 None 4103 40 5133 Bacillus marisflavi UP000000935 545693 BACMQ 5374 232 5612 Bacillus megaterium (strain ATCC 12872 / QMB1551) UP000027602 796606 None 3263 8 3277 Bacillus methanolicus MGA3 UP000031376 86668 None 1900 7 1922 Bacillus niacini UP000030832 333138 None 4285 47 4333 Bacillus okhensis UP000011289 1273739 None 78 0 79 Bacillus phage Andromeda UP000001215 1236573 None 53 0 53 Bacillus phage BMBtp2 UP000002340 552525 None 86 0 86 Bacillus phage IEBH UP000001590 10685 BPSP1 204 0 204 Bacillus phage SP01 (Bacteriophage SP01) UP000002559 10724 BPSPP 97 1 98 Bacillus phage SPP1 (Bacteriophage SPP1) UP000009091 66797 BPSPB 185 0 185 Bacillus phage SPbeta (Bacillus phage SPBc2) (Bacteriophage SP-beta) UP000002100 359961 None 53 0 53 Bacillus phage WBeta UP000001207 10756 BPPH2 27 0 27 Bacillus phage phi29 (Bacteriophage phi-29) UP000035915 79884 None 3982 37 4019 Bacillus pseudalcaliphilus UP000001544 398511 BACPE 4119 191 4335 Bacillus pseudofirmus (strain OF4) UP000001355 315750 BACP2 3675 25 3707 Bacillus pumilus (strain SAFR-032) UP000031014 1321606 None 4858 36 4894 Bacillus selenatarsenatis SF-1 UP000000271 439292 BACIE 3212 19 3255 Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10) UP000051888 157838 None 4631 59 4727 Bacillus shackletonii UP000036353 1479 None 3461 20 3619 Bacillus smithii UP000031651 98228 BACSX 3517 27 3584 Bacillus sp. (strain OxB-1) UP000013300 666686 None 4326 58 4410 Bacillus sp. 1NLA3E UP000003283 665959 None 5685 63 5769 Bacillus sp. 2_A_57_CT2 UP000042335 1476857 None 4572 22 4607 Bacillus sp. B-jedd UP000018014 1262708 None 1395 2 1397 Bacillus sp. CAG:988 UP000037908 1643452 None 3713 27 3740 Bacillus sp. CHD6a UP000036921 1581033 None 4730 58 4789 Bacillus sp. FJAT-21945 UP000037205 1581037 None 4777 71 4872 Bacillus sp. FJAT-22058 UP000050831 1712029 None 4408 50 4458 Bacillus sp. FJAT-25509 UP000036953 1679169 None 3744 26 3781 Bacillus sp. FJAT-27916 UP000037146 1679170 None 4493 66 4598 Bacillus sp. FJAT-27997 UP000019372 1460639 None 4651 27 4678 Bacillus sp. JCM 19045 UP000034887 1455638 None 5662 88 5792 Bacillus sp. SA1-12 UP000034166 1408103 None 4638 75 4758 Bacillus sp. SA2-6 UP000004417 161544 None 4249 56 4337 Bacillus sp. SG-1 UP000028527 1423321 None 3756 29 3785 Bacillus sp. SJS UP000019504 1450694 None 4026 58 4085 Bacillus sp. TS-2 UP000031100 1565991 None 2913 30 2984 Bacillus sp. X1(2014) UP000032512 285983 None 3434 31 3465 Bacillus subterraneus UP000001570 224308 BACSU 4197 7 4205 Bacillus subtilis (strain 168) UP000040576 35841 None 3435 5 6864 Bacillus thermoamylovorans UP000005383 339854 None 6077 52 6132 Bacillus thuringiensis serovar israelensis ATCC 35646 UP000050398 218284 None 4066 38 4109 Bacillus vietnamensis UP000018877 1131730 None 5030 62 5092 Bacillus vireti LMG 21834 UP000018890 1236970 None 4538 37 4576 Bacillus wakoensis JCM 9140 UP000015459 1201290 None 3038 24 3065 Bacteriovorax sp. BAL6_X UP000015857 1353529 None 3452 5 3457 Bacteriovorax sp. BSW11_IV UP000015812 1353530 None 3187 1 3192 Bacteriovorax sp. DB6_IX UP000015895 1201288 None 3281 11 3292 Bacteriovorax sp. Seq25_V UP000017642 1400053 None 2281 8 2310 Bacteroidales bacterium CF UP000017990 1263037 None 3538 5 3543 Bacteroides caccae CAG:21 UP000018191 1263038 None 4352 17 4369 Bacteroides cellulosilyticus CAG:158 UP000018226 1263039 None 2993 12 3005 Bacteroides clarus CAG:160 UP000018018 1263041 None 2346 6 2352 Bacteroides coprophilus CAG:333 UP000018439 679937 None 2376 9 2393 Bacteroides coprosuis DSM 18011 UP000018152 1263043 None 2818 9 2827 Bacteroides eggerthii CAG:109 UP000018058 1263045 None 2820 5 2825 Bacteroides finegoldii CAG:203 UP000003416 763034 None 3908 12 3921 Bacteroides fluxus YIT 12057 UP000006731 272559 BACFN 4224 10 4235 Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC 9343) UP000027601 1121097 None 3338 6 3346 Bacteroides graminisolvens DSM 19988 = JCM 15093 UP000008630 693979 BACT6 3228 12 3244 Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) UP000018219 1263048 None 3504 9 3513 Bacteroides intestinalis CAG:315 UP000018157 1263049 None 2818 9 2827 Bacteroides intestinalis CAG:564 UP000003089 997884 None 4380 8 4420 Bacteroides nordii CL02T12C05 UP000018141 1263051 None 2254 24 2278 Bacteroides pectinophilus CAG:437 UP000018372 1263052 None 2629 14 2643 Bacteroides plebeius CAG:211 UP000018823 1235813 None 3433 5 3438 Bacteroides pyogenes JCM 10003 UP000018861 1235809 None 3334 6 3340 Bacteroides pyogenes JCM 6292 UP000019131 1445607 None 4835 6 4841 Bacteroides reticulotermitis JCM 10512 UP000007486 667015 BACSH 3596 12 3641 Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) UP000018006 1262734 None 1574 2 1576 Bacteroides sp. CAG:1060 UP000018228 1262736 None 2094 9 2103 Bacteroides sp. CAG:144 UP000018406 1262737 None 3857 9 3866 Bacteroides sp. CAG:189 UP000018098 1262739 None 2699 11 2710 Bacteroides sp. CAG:443 UP000018063 1262740 None 2825 9 2834 Bacteroides sp. CAG:462 UP000018392 1262741 None 2663 6 2669 Bacteroides sp. CAG:530 UP000018187 1262742 None 2175 8 2183 Bacteroides sp. CAG:545 UP000017916 1262743 None 2766 10 2777 Bacteroides sp. CAG:598 UP000018121 1262744 None 2998 6 3004 Bacteroides sp. CAG:633 UP000018293 1262748 None 2174 4 2178 Bacteroides sp. CAG:709 UP000018068 1262749 None 2552 9 2561 Bacteroides sp. CAG:714 UP000017906 1262750 None 4048 6 4054 Bacteroides sp. CAG:754 UP000018390 1262751 None 2082 3 2085 Bacteroides sp. CAG:770 UP000018287 1262752 None 2607 5 2612 Bacteroides sp. CAG:875 UP000017907 1262753 None 2228 3 2231 Bacteroides sp. CAG:927 UP000018115 1262754 None 2657 13 2670 Bacteroides sp. CAG:98 UP000050819 1703352 None 4356 22 4378 Bacteroides sp. SM23_62 UP000051265 1703353 None 3344 34 3378 Bacteroides sp. SM23_62_1 UP000001414 226186 BACTN 4775 7 4823 Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) UP000018282 1263055 None 3561 9 3570 Bacteroides uniformis CAG:3 UP000002861 435590 BACV8 3968 14 4065 Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / JCM 5826 / NBRC 14291 / NCTC 11154) UP000008795 657309 None 4396 11 4407 Bacteroides xylanisolvens XB1A UP000050310 1666909 None 2703 3 2707 Bacteroidetes bacterium HLUCCA01 UP000015345 888054 None 2103 0 2108 Bacteroidetes bacterium oral taxon 272 str. F0290 UP000004685 575590 None 1848 6 1856 Bacteroidetes oral taxon 274 str. F0058 UP000002339 645099 BBTVA 7 0 7 Banana bunchy top virus (isolate Autralia) (BBTV) UP000000832 649604 BAVJK 12 0 12 Banna virus (strain Indonesia/JKT-6423/1980) (BAV) UP000001667 12327 BSMV 7 0 7 Barley stripe mosaic virus (BSMV) UP000006722 12040 BYDVP 6 1 7 Barley yellow dwarf virus (isolate PAV) (BYDV) UP000006704 652104 BAYMY 2 0 2 Barley yellow mosaic virus (isolate China/Yancheng/1998) (BaYMV) UP000018901 880074 None 2483 4 2512 Barnesiella viscericola DSM 18177 UP000000643 360095 BARBK 1255 0 1283 Bartonella bacilliformis (strain ATCC 35685 / KC583) UP000008952 1094558 None 1976 2 1983 Bartonella tamiae Th239 UP000028945 1072685 None 1451 1 1454 Basilea psittacipulmonis DSM 24701 UP000050312 1700835 None 2401 2 2403 Bathyarchaeota archaeon BA1 UP000050284 1700836 None 1760 1 1761 Bathyarchaeota archaeon BA2 UP000007241 684364 BATDJ 8610 0 8700 Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) (Frog chytrid fungus) UP000011761 717646 BAUCO 10508 0 10508 Baudoinia compniacensis (strain UAMH 10762) (Angels' share fungus) UP000002427 374463 BAUCH 595 0 595 Baumannia cicadellinicola subsp. Homalodisca coagulata UP000008080 264462 BDEBA 3438 145 3583 Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) UP000019233 765869 None 2838 16 2871 Bdellovibrio bacteriovorus W UP000012040 1184267 None 2602 16 2618 Bdellovibrio exovorus JSS UP000002418 145579 BPPHM 11 0 11 Bdellovibrio phage phiMH2K (Bacteriophage phiMH2K) UP000008769 222449 BGYMJ 9 0 16 Bean golden yellow mosaic virus (isolate Puerto Rico-Japan) (BGYMV) UP000002762 655819 BEAB2 10363 0 10364 Beauveria bassiana (strain ARSEF 2860) (White muscardine disease fungus) (Tritirachium shiotae) UP000030106 1245745 None 11857 3 11861 Beauveria bassiana D1-5 UP000029773 1559363 BCTIV 5 0 5 Beet curly top Iran virus (isolate Sugar beet/Iran/Kerman/-) UP000006542 268960 BCTVC 7 0 11 Beet curly top virus (strain California/Logan) (BCTV) UP000001100 652670 BNYVS 9 1 10 Beet necrotic yellow vein virus (isolate Japan/S) (BNYVV) UP000000359 478555 BYVU 8 1 9 Beet yellows virus (isolate Ukraine) (BYV) (Sugar beet yellows virus) UP000005744 395493 None 3433 7 3450 Beggiatoa alba B18LD UP000003255 422289 None 6594 50 6644 Beggiatoa sp. PS UP000003533 422288 None 1435 2 1437 Beggiatoa sp. SS UP000001695 395963 BEII9 3755 19 3784 Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) UP000006050 866536 BELBD 3598 11 3680 Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) UP000050514 360411 None 2968 22 2990 Bellilinea caldifistulae UP000006085 883096 None 2117 3 2138 Bergeyella zoohelcum ATCC 43767 UP000034508 1618331 None 914 6 920 Berkelbacteria bacterium GW2011_GWA1_36_9 UP000034316 1618333 None 679 1 680 Berkelbacteria bacterium GW2011_GWA2_35_9 UP000033934 1618334 None 842 0 842 Berkelbacteria bacterium GW2011_GWA2_38_9 UP000034487 1618335 None 460 0 460 Berkelbacteria bacterium GW2011_GWA2_46_7 UP000034498 1618336 None 600 13 613 Berkelbacteria bacterium GW2011_GWB1_38_5 UP000035648 1618337 None 986 5 992 Berkelbacteria bacterium GW2011_GWE1_39_12 UP000004263 207949 None 3286 17 3314 Bermanella marisrubri UP000035740 3555 None 26442 2209 28703 Beta vulgaris subsp. vulgaris UP000017838 1408164 None 2682 1 2683 Betaproteobacteria bacterium MOLA814 UP000051483 1703390 None 2882 28 2910 Betaproteobacteria bacterium SG8_39 UP000051602 1703389 None 2252 17 2269 Betaproteobacteria bacterium SG8_40 UP000051544 1703391 None 3143 33 3177 Betaproteobacteria bacterium SG8_41 UP000007962 471853 BEUC1 4170 25 4197 Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) UP000011919 1235279 None 3166 2 3169 Bhargavaea cecembensis DSE10 UP000011846 1171377 None 2240 4 2248 Bibersteinia trehalosi USDA-ARS-USMARC-192 UP000029015 1437605 None 1479 5 1484 Bifidobacterium actinocoloniiforme DSM 22766 UP000008702 367928 BIFAA 1605 24 1632 Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) UP000006408 518635 None 1710 14 2772 Bifidobacterium angulatum DSM 20098 = JCM 7096 UP000002456 442563 BIFA0 1484 41 1528 Bifidobacterium animalis subsp. lactis (strain AD011) UP000007006 1147128 BIFAP 1648 8 1658 Bifidobacterium asteroides (strain PRL2011) UP000029108 1437608 None 2551 6 2557 Bifidobacterium biavatii DSM 23969 UP000006173 484020 None 1709 125 1835 Bifidobacterium bifidum BGN4 UP000029096 1437606 None 1628 3 1632 Bifidobacterium bohemicum DSM 22767 UP000028730 1341695 None 1450 4 1454 Bifidobacterium bombi DSM 19703 UP000003191 518634 None 2244 18 3554 Bifidobacterium breve DSM 20213 = JCM 1192 UP000029072 1437609 None 2354 8 2364 Bifidobacterium callitrichos DSM 23973 UP000029067 1688 None 2182 7 2194 Bifidobacterium cuniculi UP000008693 401473 BIFDB 2028 93 2129 Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) UP000003656 561180 None 1906 11 2826 Bifidobacterium gallicum DSM 20093 = LMG 11596 UP000029046 78344 None 1645 7 1654 Bifidobacterium gallinarum UP000030625 1447716 None 1861 9 1875 Bifidobacterium kashiwanohense PV20-2 UP000000439 206672 BIFLO 1725 0 1730 Bifidobacterium longum (strain NCC 2705) UP000029052 1692 None 1503 4 1507 Bifidobacterium magnum UP000029014 1693 None 1585 4 1590 Bifidobacterium minimum UP000029082 1437603 None 1787 11 1798 Bifidobacterium mongoliense DSM 21395 UP000030636 1447715 None 1573 5 1582 Bifidobacterium pseudolongum PV8-2 UP000029050 218140 None 2109 13 2122 Bifidobacterium psychraerophilum UP000028984 1437610 None 2139 10 2149 Bifidobacterium reuteri DSM 23975 UP000029033 158787 None 2464 13 2480 Bifidobacterium scardovii UP000029004 762211 None 2190 12 2202 Bifidobacterium stellenboschense UP000029055 77635 None 2241 18 2260 Bifidobacterium subtile UP000011835 1254439 None 1827 11 1845 Bifidobacterium thermophilum RBL67 UP000029080 356829 None 1622 7 1629 Bifidobacterium tsurumiense UP000006034 563192 None 3760 19 3786 Bilophila wadsworthia 3_1_6 UP000003730 1046627 None 3083 12 3095 Bizionia argentinensis JUB59 UP000006703 686949 BVY3 1 0 1 Blackberry virus Y (isolate Blackberry plant/USA:Arkansas/C3ARK/2005) (BVY) UP000007517 1146883 BLASD 4763 28 4821 Blastococcus saxobsidens (strain DD2) UP000008312 12968 BLAHO 5820 0 6020 Blastocystis hominis UP000037930 1523416 None 3671 14 3685 Blastomonas sp. AAP25 UP000004358 314230 None 5991 19 6025 Blastopirellula marina DSM 3645 UP000007112 1075399 None 542 6 548 Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu UP000018163 1263061 None 3060 27 3087 Blautia hydrogenotrophica CAG:147 UP000008955 657314 None 3131 24 3155 Blautia obeum A2-162 UP000017983 1262755 None 2599 28 2627 Blautia sp. CAG:237 UP000018056 1262756 None 2492 24 2516 Blautia sp. CAG:257 UP000018204 1262757 None 2335 18 2354 Blautia sp. CAG:37 UP000018177 1262758 None 2441 24 2465 Blautia sp. CAG:52 UP000033104 1505597 None 584 0 584 Blochmannia endosymbiont of Camponotus (Colobopsis) obliquus UP000033094 1505596 None 589 0 589 Blochmannia endosymbiont of Polyrhachis (Hedomyrma) turneri UP000002192 203907 BLOFL 580 3 583 Blochmannia floridanus UP000007250 311176 BSNV 3 0 3 Blotched snakehead virus (BSNV) (Channa lucius virus) UP000007662 10900 BTV10 11 0 11 Bluetongue virus 10 (isolate USA) (BTV 10) UP000015441 546991 BLUG1 6486 0 6495 Blumeria graminis f. sp. hordei (strain DH14) (Barley powdery mildew) (Oidium monilioides f. sp. hordei) UP000051952 75058 BODSA 18124 0 18177 Bodo saltans (Flagellated protozoan) UP000005204 7091 BOMMO 14726 50 14806 Bombyx mori (Silk moth) UP000008972 648412 BMDND 7 0 7 Bombyx mori densovirus 3 (isolate Silkworm/China/Zhenjiang/-) (BmDNV-3) UP000007432 648251 BMDNS 4 0 4 Bombyx mori densovirus 5 (isolate Shinshu) (BmDNV-5) UP000001977 360910 BORA1 3310 62 3382 Bordetella avium (strain 197N) UP000044653 520 BORPT 3403 219 4421 Bordetella pertussis UP000002676 257313 BORPE 3200 58 3446 Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) UP000001225 340100 BORPD 4886 26 5008 Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) UP000001765 194699 BPBPP 49 0 49 Bordetella phage BPP-1 UP000007804 928296 BDVV 5 2 7 Borna disease virus (strain V) (BDV) UP000001807 224326 BORBU 1288 2 1365 Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) UP000019148 1432657 None 1990 5 2053 Borrelia duttonii CR2A UP000001205 314724 BORT9 816 2 818 Borrelia turicatae (strain 91E135) UP000009136 9913 BOVIN 20055 4425 24574 Bos taurus (Bovine) UP000052095 1001533 None 7 0 7 Bos taurus papillomavirus 7 UP000037890 1523417 None 3943 31 3974 Bosea sp. AAP35 UP000028622 1502851 None 6182 8 6192 Bosea sp. LC85 UP000050986 1736346 None 3856 20 3876 Bosea sp. Leaf344 UP000050937 1736524 None 5064 32 5096 Bosea sp. Root381 UP000051771 1736544 None 5993 53 6046 Bosea sp. Root483D1 UP000051562 53254 None 4917 39 4962 Bosea thiooxidans UP000027195 930990 None 16481 3 16502 Botryobasidium botryosum FD-172 SS1 UP000013521 1287680 BOTPV 10363 2 10366 Botryosphaeria parva (strain UCR-NP2) (Grapevine canker fungus) (Neofusicoccum parvum) UP000012045 1290391 BOTF1 11021 1 11028 Botryotinia fuckeliana (strain BcDW1) (Noble rot fungus) (Botrytis cinerea) UP000008177 999810 BOTF4 16338 0 16353 Botryotinia fuckeliana (strain T4) (Noble rot fungus) (Botrytis cinerea) UP000000398 686946 BOTVF 2 0 2 Botrytis virus F (isolate Botrytis cinerea/New Zealand/Howitt/2001) (BotV-F) UP000001664 686947 BOTVX 5 0 5 Botrytis virus X (isolate Botrytis cinerea/New Zealand/Howitt/2006) (BOTV-X) UP000000668 331642 BECN1 2 0 2 Bovine enteric calicivirus Newbury agent-1 (isolate Bovine/UK/Newbury1/1976) (BEC) UP000008588 928297 BEFVB 12 0 12 Bovine ephemeral fever virus (strain BB7721) (BEFV) UP000006369 10561 BPV3 8 0 8 Bovine papillomavirus type 3 UP000008785 40537 BPV5 6 0 6 Bovine papillomavirus type 5 UP000007022 648243 PAVBP 3 0 3 Bovine parvovirus (isolate pAT153/1986) (BPV) UP000002317 11100 BVDVN 1 0 1 Bovine viral diarrhea virus (isolate NADL) (BVDV) (Mucosal disease virus) UP000001919 446465 BRAFD 3047 15 3068 Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) UP000019754 1249481 None 2784 22 2806 Brachybacterium muris UCD-AY4 UP000023067 396014 None 3585 20 3605 Brachybacterium phenoliresistens UP000008810 15368 BRADI 26503 3454 30040 Brachypodium distachyon (Purple false brome) (Trachynia distachya) UP000001803 565034 BRAHW 2410 232 2644 Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) UP000018274 1262759 None 2208 8 2216 Brachyspira sp. CAG:484 UP000017901 1262760 None 2275 5 2280 Brachyspira sp. CAG:700 UP000003148 709797 None 4210 26 4236 Bradyrhizobiaceae bacterium SG-6C UP000002526 224911 BRADU 8024 229 8314 Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) UP000032215 29448 BRAEL 6765 55 6823 Bradyrhizobium elkanii UP000051660 722472 None 7712 69 7781 Bradyrhizobium lablabi UP000051936 989370 None 7569 106 7794 Bradyrhizobium manausense UP000001994 114615 BRASO 6551 150 6717 Bradyrhizobium sp. (strain ORS278) UP000019052 1223566 None 3738 8 3746 Bradyrhizobium sp. CCGE-LA001 UP000051536 1736363 None 6905 67 6972 Bradyrhizobium sp. Leaf396 UP000002686 551947 None 7957 244 8201 Bradyrhizobium sp. STM 3843 UP000001554 7739 BRAFL 28538 6 28639 Branchiostoma floridae (Florida lancelet) (Amphioxus) UP000028999 3708 BRANA 98750 11 101087 Brassica napus (Rape) UP000032141 109376 None 58489 46 59220 Brassica oleracea var. oleracea UP000011750 51351 BRARP 40800 9 41033 Brassica rapa subsp. pekinensis (Chinese cabbage) (Brassica pekinensis) UP000000355 360393 BRV1 6 0 6 Breda virus 1 (BRV-1) UP000002759 598467 None 4363 23 4388 Brenneria sp. EniD312 UP000004997 1124627 None 4857 0 4860 Brettanomyces bruxellensis AWRI1499 UP000012081 1300222 None 4901 50 4951 Brevibacillus borstelensis AK1 UP000001877 358681 BREBN 5793 94 5949 Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) UP000005850 1042163 None 4512 20 4549 Brevibacillus laterosporus LMG 15441 UP000017973 1408254 None 5130 58 5294 Brevibacillus panacihumi W25 UP000031488 1703 BRELN 3411 23 3434 Brevibacterium linens UP000005714 585530 None 2389 43 2432 Brevibacterium mcbrellneri ATCC 49030 UP000016569 1391729 None 2939 7 2946 Brevundimonas abyssalis TAR-001 UP000002955 751586 None 2992 10 3002 Brevundimonas diminuta ATCC 11568 UP000033583 1628191 None 2897 9 2906 Brevundimonas sp. KM4 UP000051182 1736353 None 2946 9 2955 Brevundimonas sp. Leaf363 UP000050923 1736443 None 3230 6 3236 Brevundimonas sp. Root1279 UP000051815 1736462 None 4949 297 5258 Brevundimonas sp. Root1423 UP000002696 633149 BRESC 3320 6 3327 Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) (Caulobacter subvibrioides) UP000000409 649895 BBWVS 2 0 2 Broad bean wilt virus 1 (strain Spinach/United States/ATCC PV-132/1963) (BBWV-1) UP000019243 1265861 None 2410 13 2424 Brochothrix campestris FSL F6-1037 UP000019242 1121126 None 2563 26 2589 Brochothrix thermosphacta DSM 20171 = FSL F6-1036 UP000001649 12302 BMV 4 0 4 Brome mosaic virus (BMV) UP000000521 117138 BSTV1 1 0 1 Brome streak virus (strain 11-Cal) (BStV) (Brome streak mosaic rymovirus) UP000002719 359391 BRUA2 3018 4 3034 Brucella abortus (strain 2308) UP000006672 6279 BRUMA 14017 3563 17745 Brugia malayi (Filarial nematode worm) UP000038020 6280 BRUPA 13532 13 13545 Brugia pahangi (Filarial nematode worm) UP000050602 42155 None 16081 18 16099 Brugia timori UP000006811 261317 None 359 0 359 Buchnera aphidicola (Cinara tujafilina) UP000001806 107806 BUCAI 572 0 574 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium) UP000000601 224915 BUCBP 507 0 507 Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) UP000000669 372461 BUCCC 362 0 362 Buchnera aphidicola subsp. Cinara cedri (strain Cc) UP000005017 679192 None 1400 15 1415 Bulleidia extructa W1219 UP000002476 35304 BUNYW 4 0 4 Bunyamwera virus (BUNV) UP000008768 796210 BUNL8 4 0 4 Bunyavirus La Crosse (isolate Human/United States/L78/1978) UP000033618 28092 None 4711 26 4738 Burkholderia andropogonis UP000001035 216591 BURCJ 6859 134 7121 Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) (Burkholderia cepacia (strain J2315)) UP000032941 1395570 None 7213 96 7344 Burkholderia cepacia JBK9 UP000032614 134537 None 7892 250 8174 Burkholderia fungorum UP000008316 999541 BURGS 7282 69 7410 Burkholderia gladioli (strain BSR3) UP000027466 60547 None 7369 95 7465 Burkholderia glathei UP000035963 908627 None 8046 136 8184 Burkholderia glathei PML1(12) UP000002187 626418 BURGB 5613 47 5773 Burkholderia glumae (strain BGR1) UP000001160 242527 None 77 0 77 Burkholderia phage Bcep22 UP000011235 1283334 BPB78 66 0 66 Burkholderia phage Bcep781 (isolate -/United States/Beer/1978) (Bacteriophage Bcep781) UP000011237 1283335 BPBMU 53 0 53 Burkholderia phage BcepMu (isolate -/United States/Summer/2002) (Bacteriophage BcepMu) UP000000847 180504 None 72 0 72 Burkholderia phage phiE125 UP000001192 391038 BURP8 7382 79 7496 Burkholderia phymatum (strain DSM 17167 / STM815) UP000000605 272560 BURPS 5626 91 5729 Burkholderia pseudomallei (strain K96243) UP000007437 882378 BURRH 3841 18 3870 Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) UP000030460 159450 None 5648 81 5731 Burkholderia sacchari UP000002190 640511 BURSC 6800 66 6889 Burkholderia sp. (strain CCGE1002) UP000001550 640512 BURSG 5911 72 5988 Burkholderia sp. (strain CCGE1003) UP000051826 1736287 None 5886 69 5955 Burkholderia sp. Leaf177 UP000031560 870478 None 5506 45 5554 Burkholderia sp. MR1 UP000037921 1682204 None 5664 78 5745 Burkholderia sp. ST111 UP000003049 987057 None 8830 110 8940 Burkholderia sp. TJI49 UP000006801 1097668 None 6960 807 7804 Burkholderia sp. YI23 UP000027020 1192124 None 4950 43 4994 Burkholderia sp. lig30 UP000001817 266265 BURXL 8495 96 8702 Burkholderia xenovorans (strain LB400) UP000031649 1469502 None 2938 17 3087 Burkholderiales bacterium GJ-E10 UP000004674 864051 None 4872 19 4908 Burkholderiales bacterium JOSHI_001 UP000013981 1203606 None 3091 16 3112 Butyricicoccus pullicaecorum 1.2 UP000018300 1263062 None 1963 13 1976 Butyrivibrio crossotus CAG:259 UP000008796 657324 None 2891 13 2904 Butyrivibrio fibrisolvens 16/4 UP000001299 515622 BUTPB 3791 8 3811 Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) (Clostridium proteoclasticum) UP000018075 1262761 None 2111 16 2127 Butyrivibrio sp. CAG:318 UP000018001 1356009 BYSSN 8875 2 8877 Byssochlamys spectabilis (strain No. 5 / NBRC 109023) (Paecilomyces variotii) UP000029752 1554482 CADIV 2 0 2 Cadicivirus A (isolate Dog/Hong Kong/209/2008) UP000036771 1629334 None 1663 0 1726 Caedibacter varicaedens UP000009881 1238182 None 4551 23 4574 Caenispirillum salinarum AK4 UP000008068 135651 CAEBE 29951 31 30670 Caenorhabditis brenneri (Nematode worm) UP000008549 6238 CAEBR 21725 30 22363 Caenorhabditis briggsae UP000001940 6239 CAEEL 20137 7662 32505 Caenorhabditis elegans UP000005237 281687 CAEJA 29028 6037 36015 Caenorhabditis japonica UP000008281 31234 CAERE 31240 12 31474 Caenorhabditis remanei (Caenorhabditis vulgaris) UP000029781 693272 CROVB 544 0 544 Cafeteria roenbergensis virus (strain BV-PW1) (CroV) UP000010716 986075 None 2947 22 2971 Caldalkalibacillus thermarum TA2.A1 UP000000555 273068 CALS4 2545 0 2586 Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis) UP000000256 351627 CALS8 2616 13 2682 Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 / Tp8T 6331) UP000007880 926550 CALAS 3943 154 4119 Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) UP000013378 1304284 None 2660 21 2681 Caldisalinibacter kiritimatiensis UP000004793 511051 CALEA 1532 34 1582 Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) UP000010469 1056495 CALLD 1470 7 1478 Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) UP000007039 768670 CALNY 2075 14 2100 Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) UP000004671 880073 None 3644 30 3750 Caldithrix abyssi DSM 13497 UP000001137 397948 CALMQ 1959 3 1963 Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) UP000008225 9483 CALJA 20781 21283 42122 Callithrix jacchus (White-tufted-ear marmoset) UP000007652 857293 None 2658 21 2725 Caloramator australicus RC3 UP000052015 908809 None 2400 0 2401 Caloramator mitchellensis UP000029622 1156417 None 2136 12 2148 Caloranaerobacter azorensis H53214 UP000010477 1170562 None 5441 43 5535 Calothrix sp. PCC 6303 UP000010390 99598 None 5859 65 5950 Calothrix sp. PCC 7507 UP000030684 419612 None 19997 6 20189 Camelus ferus (Wild Bactrian camel) UP000006518 654920 CSIVT 5 0 5 Campoletis sonorensis ichnovirus (strain Texas A&M) (CsIV) UP000000311 104421 CAMFO 14782 5 14863 Camponotus floridanus (Florida carpenter ant) UP000006380 360105 CAMC5 1858 0 1861 Campylobacter curvus (strain 525.92) UP000000760 360106 CAMFF 1704 11 1719 Campylobacter fetus subsp. fetus (strain 82-40) UP000005709 553220 None 2840 6 2847 Campylobacter gracilis RM3268 UP000002407 360107 CAMHC 1683 4 1687 Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) UP000000799 192222 CAMJE 1614 10 1625 Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) UP000007727 306263 CAMLR 1543 2 1546 Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) UP000027824 202 None 1511 3 1514 Campylobacter mucosalis UP000005880 1110702 None 149 0 149 Campylobacter phage CPX UP000003082 553218 None 2960 11 2971 Campylobacter rectus RM3267 UP000003107 553219 None 2349 12 2361 Campylobacter showae RM3277 UP000014539 883165 None 1683 3 1732 Campylobacter ureolyticus ACS-301-V-Sch3b UP000000559 237561 CANAL 8264 775 13335 Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast) UP000037122 498019 None 7457 1 7461 Candida auris UP000002428 284593 CANGA 5196 5 5214 Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (Yeast) (Torulopsis glabrata) UP000011777 1245528 CANMX 5976 0 5984 Candida maltosa (strain Xu316) (Yeast) UP000005221 578454 CANPC 5777 0 5810 Candida parapsilosis (strain CDC 317 / ATCC MYA-4646) (Yeast) (Monilia parapsilosis) UP000000707 590646 CANTC 5540 511 6058 Candida tenuis (strain ATCC 10573 / BCRC 21748 / CBS 615 / JCM 9827 / NBRC 10315 / NRRL Y-1498 / VKM Y-70) (Yeast) UP000002037 294747 CANTT 6225 1 6253 Candida tropicalis (strain ATCC MYA-3404 / T1) (Yeast) UP000020077 1454002 None 4443 6 4451 Candidatus Accumulibacter sp. BA-91 UP000022141 1454004 None 4034 4 4039 Candidatus Accumulibacter sp. BA-93 UP000020878 1454005 None 3121 6 3127 Candidatus Accumulibacter sp. BA-94 UP000021315 1453999 None 3948 5 3953 Candidatus Accumulibacter sp. SK-02 UP000020226 1454000 None 4761 6 4768 Candidatus Accumulibacter sp. SK-11 UP000020218 1454001 None 3898 8 3906 Candidatus Accumulibacter sp. SK-12 UP000034740 1618605 None 643 5 648 Candidatus Adlerbacteria bacterium GW2011_GWA1_54_10 UP000034201 1618608 None 892 18 910 Candidatus Adlerbacteria bacterium GW2011_GWC1_50_9 UP000034160 1618356 None 819 4 823 Candidatus Amesbacteria bacterium GW2011_GWA2_42_12 UP000034853 1618363 None 1069 3 1072 Candidatus Amesbacteria bacterium GW2011_GWC1_46_24 UP000034502 1618364 None 1026 0 1026 Candidatus Amesbacteria bacterium GW2011_GWC1_47_15 UP000034877 1618365 None 986 0 986 Candidatus Amesbacteria bacterium GW2011_GWC1_48_10 UP000034264 1618366 None 915 2 918 Candidatus Amesbacteria bacterium GW2011_GWC2_45_19 UP000033358 1607817 None 815 0 882 Candidatus Arcanobacter lacustris UP000034595 1618610 None 714 16 730 Candidatus Azambacteria bacterium GW2011_GWA1_44_9 UP000034706 1618611 None 338 0 338 Candidatus Azambacteria bacterium GW2011_GWA2_39_10 UP000034569 1618619 None 647 1 648 Candidatus Azambacteria bacterium GW2011_GWC1_46_13 UP000034763 1618622 None 609 3 612 Candidatus Azambacteria bacterium GW2011_GWD1_43_18 UP000018769 673862 None 981 0 981 Candidatus Babela massiliensis UP000034213 1618369 None 692 5 697 Candidatus Beckwithbacteria bacterium GW2011_GWA2_43_10 UP000033860 1618371 None 1143 3 1146 Candidatus Beckwithbacteria bacterium GW2011_GWB1_47_15 UP000034772 1618373 None 402 0 402 Candidatus Beckwithbacteria bacterium GW2011_GWC2_47_9 UP000034954 380242 None 3369 22 3401 Candidatus Brocadia fulgida UP000032309 1197129 None 3839 39 3912 Candidatus Brocadia sinica JPN1 UP000003511 1055526 None 2009 6 2070 Candidatus Burkholderia kirkii UZHbot1 UP000036959 242163 None 4466 26 4492 Candidatus Burkholderia verschuerenii UP000028946 244581 None 1626 3 1683 Candidatus Caedibacter acanthamoebae UP000008120 311458 None 2117 37 4522 Candidatus Caldiarchaeum subterraneum UP000034070 1618629 None 765 0 765 Candidatus Campbellbacteria bacterium GW2011_GWC1_35_31 UP000015332 667013 None 206 0 207 Candidatus Carsonella ruddii DC UP000052007 1732214 None 2276 10 2286 Candidatus Cloacimonas sp. SDB UP000034069 1618376 None 855 0 855 Candidatus Collierbacteria bacterium GW2011_GWA1_44_12 UP000033854 1618378 None 800 0 800 Candidatus Collierbacteria bacterium GW2011_GWA2_42_17 UP000034794 1618381 None 1173 0 1173 Candidatus Collierbacteria bacterium GW2011_GWA2_46_26 UP000034604 1618383 None 300 0 300 Candidatus Collierbacteria bacterium GW2011_GWB1_44_35 UP000034006 1618387 None 1168 0 1168 Candidatus Collierbacteria bacterium GW2011_GWB2_44_22 UP000034172 1618392 None 963 1 965 Candidatus Collierbacteria bacterium GW2011_GWC2_44_18 UP000035760 1400863 None 3935 79 4017 Candidatus Competibacter denitrificans Run_A_D11 UP000019184 1400861 None 4663 100 4768 Candidatus Contendobacter odensis Run_B_J11 UP000034531 1618405 None 1020 17 1037 Candidatus Curtissbacteria bacterium GW2011_GWA1_40_16 UP000034489 1618406 None 280 0 280 Candidatus Curtissbacteria bacterium GW2011_GWA1_40_24 UP000034292 1618408 None 340 0 340 Candidatus Curtissbacteria bacterium GW2011_GWA1_40_9 UP000034854 1618409 None 907 15 922 Candidatus Curtissbacteria bacterium GW2011_GWA1_41_11 UP000034493 1618411 None 1083 2 1085 Candidatus Curtissbacteria bacterium GW2011_GWA2_41_24 UP000033901 1618413 None 510 0 510 Candidatus Curtissbacteria bacterium GW2011_GWC1_44_33 UP000034893 1618414 None 606 0 606 Candidatus Curtissbacteria bacterium GW2011_GWC2_38_9 UP000034033 1618415 None 1139 2 1141 Candidatus Curtissbacteria bacterium GW2011_GWC2_41_21 UP000051780 1640508 None 2390 33 2424 Candidatus Dadabacteria bacterium CSP1-2 UP000034135 1618420 None 491 0 491 Candidatus Daviesbacteria bacterium GW2011_GWA1_42_6 UP000034735 1618421 None 526 0 526 Candidatus Daviesbacteria bacterium GW2011_GWA2_38_17 UP000034235 1618422 None 1225 9 1234 Candidatus Daviesbacteria bacterium GW2011_GWA2_38_24 UP000034601 1618424 None 1097 0 1097 Candidatus Daviesbacteria bacterium GW2011_GWA2_40_9 UP000034785 1618425 None 866 0 866 Candidatus Daviesbacteria bacterium GW2011_GWA2_42_7 UP000034492 1618426 None 1228 3 1231 Candidatus Daviesbacteria bacterium GW2011_GWB1_36_5 UP000034753 1618429 None 1226 2 1228 Candidatus Daviesbacteria bacterium GW2011_GWB1_41_5 UP000034881 1618431 None 1308 1 1309 Candidatus Daviesbacteria bacterium GW2011_GWC2_40_12 UP000034324 1618432 None 949 3 952 Candidatus Daviesbacteria bacterium GW2011_GWF2_38_6 UP000018700 1401328 None 755 15 770 Candidatus Endolissoclinum faulkneri L5 UP000019141 1429438 None 8378 51 8438 Candidatus Entotheonella sp. TSY1 UP000019140 1429439 None 8950 39 8989 Candidatus Entotheonella sp. TSY2 UP000032420 1495769 None 330 0 330 Candidatus Evansia muelleri UP000034048 1618634 None 579 0 579 Candidatus Falkowbacteria bacterium GW2011_GWA2_39_24 UP000034190 1618635 None 451 4 455 Candidatus Falkowbacteria bacterium GW2011_GWA2_41_14 UP000034022 1618638 None 1160 4 1165 Candidatus Falkowbacteria bacterium GW2011_GWE1_38_31 UP000034137 1618642 None 1035 3 1038 Candidatus Falkowbacteria bacterium GW2011_GWF2_39_8 UP000034431 1618643 None 792 2 794 Candidatus Falkowbacteria bacterium GW2011_GWF2_43_32 UP000033187 1608628 None 3957 88 4045 Candidatus Filomicrobium marinum UP000034087 1618645 None 1042 3 1045 Candidatus Giovannonibacteria bacterium GW2011_GWA1_44_25 UP000034736 1618647 None 759 0 759 Candidatus Giovannonibacteria bacterium GW2011_GWA2_44_13b UP000033945 1618648 None 1039 15 1054 Candidatus Giovannonibacteria bacterium GW2011_GWA2_44_26 UP000034696 1618649 None 672 4 676 Candidatus Giovannonibacteria bacterium GW2011_GWA2_45_21 UP000034290 1618650 None 676 31 707 Candidatus Giovannonibacteria bacterium GW2011_GWA2_53_7 UP000034020 1618653 None 409 1 410 Candidatus Giovannonibacteria bacterium GW2011_GWB1_45_9b UP000034682 1618655 None 738 23 761 Candidatus Giovannonibacteria bacterium GW2011_GWB1_47_6b UP000034889 1618657 None 525 1 526 Candidatus Giovannonibacteria bacterium GW2011_GWC2_44_8 UP000034036 1618659 None 933 1 934 Candidatus Giovannonibacteria bacterium GW2011_GWF2_42_19 UP000034176 1618434 None 595 2 597 Candidatus Gottesmanbacteria bacterium GW2011_GWA1_34_13 UP000034543 1618436 None 1505 6 1512 Candidatus Gottesmanbacteria bacterium GW2011_GWA1_43_11 UP000034212 1618438 None 331 5 336 Candidatus Gottesmanbacteria bacterium GW2011_GWA1_47_8 UP000034661 1618439 None 606 10 616 Candidatus Gottesmanbacteria bacterium GW2011_GWA1_48_13 UP000033908 1618440 None 245 1 246 Candidatus Gottesmanbacteria bacterium GW2011_GWA2_41_12 UP000034320 1618442 None 1324 0 1324 Candidatus Gottesmanbacteria bacterium GW2011_GWA2_42_18 UP000034894 1618443 None 1690 9 1699 Candidatus Gottesmanbacteria bacterium GW2011_GWA2_43_14 UP000034063 1618444 None 647 5 652 Candidatus Gottesmanbacteria bacterium GW2011_GWA2_44_17 UP000034739 1618445 None 1272 1 1273 Candidatus Gottesmanbacteria bacterium GW2011_GWA2_47_9 UP000034050 1618446 None 1519 3 1524 Candidatus Gottesmanbacteria bacterium GW2011_GWB1_43_11 UP000034588 1618448 None 1156 0 1156 Candidatus Gottesmanbacteria bacterium GW2011_GWB1_49_7 UP000034539 1618450 None 1532 12 1544 Candidatus Gottesmanbacteria bacterium GW2011_GWC2_39_8 UP000019450 1427984 None 582 0 582 Candidatus Hepatoplasma crinochetorum Av UP000002985 247490 None 3509 36 3600 Candidatus Jettenia caeni UP000034956 1618660 None 739 0 739 Candidatus Jorgensenbacteria bacterium GW2011_GWA1_48_11 UP000033966 1618662 None 657 0 657 Candidatus Jorgensenbacteria bacterium GW2011_GWA2_45_13 UP000034727 1618663 None 577 0 577 Candidatus Jorgensenbacteria bacterium GW2011_GWA2_45_9 UP000034600 1618666 None 625 5 630 Candidatus Jorgensenbacteria bacterium GW2011_GWC1_48_8 UP000033856 1618667 None 618 2 620 Candidatus Jorgensenbacteria bacterium GW2011_GWF2_41_8 UP000033965 1618669 None 577 4 581 Candidatus Kaiserbacteria bacterium GW2011_GWA2_49_19 UP000033825 1618670 None 130 0 130 Candidatus Kaiserbacteria bacterium GW2011_GWA2_49_56 UP000034789 1618672 None 655 0 655 Candidatus Kaiserbacteria bacterium GW2011_GWA2_58_9 UP000034589 1618675 None 690 0 690 Candidatus Kaiserbacteria bacterium GW2011_GWC2_49_12 UP000034445 1618676 None 1083 9 1092 Candidatus Kaiserbacteria bacterium GW2011_GWC2_52_8b UP000011547 1208919 None 740 2 742 Candidatus Kinetoplastibacterium desouzaii TCC079E UP000011658 1208921 None 726 1 727 Candidatus Kinetoplastibacterium galatii TCC219 UP000034516 1618677 None 829 3 832 Candidatus Kuenenbacteria bacterium GW2011_GWA2_42_15 UP000034928 1618453 None 898 1 899 Candidatus Levybacteria bacterium GW2011_GWA1_39_11 UP000034624 1618454 None 822 18 840 Candidatus Levybacteria bacterium GW2011_GWA1_39_32 UP000034897 1618455 None 334 5 339 Candidatus Levybacteria bacterium GW2011_GWA1_39_34 UP000034031 1618456 None 449 3 452 Candidatus Levybacteria bacterium GW2011_GWA2_36_13 UP000034000 1618457 None 544 8 552 Candidatus Levybacteria bacterium GW2011_GWA2_37_36 UP000034824 1618458 None 827 27 854 Candidatus Levybacteria bacterium GW2011_GWA2_40_16 UP000034541 1618459 None 748 11 759 Candidatus Levybacteria bacterium GW2011_GWA2_40_8 UP000033880 1618461 None 588 1 589 Candidatus Levybacteria bacterium GW2011_GWB1_35_5 UP000033902 1618463 None 796 0 796 Candidatus Levybacteria bacterium GW2011_GWB1_37_8 UP000034509 1618466 None 819 3 822 Candidatus Levybacteria bacterium GW2011_GWC1_40_19 UP000017862 1261131 None 932 46 983 Candidatus Liberibacter americanus str. Sao Paulo UP000034333 1619036 None 845 2 847 Candidatus Magasanikbacteria bacterium GW2011_GWA2_37_8 UP000034855 1619037 None 342 1 343 Candidatus Magasanikbacteria bacterium GW2011_GWA2_40_10 UP000034837 1619039 None 1399 30 1429 Candidatus Magasanikbacteria bacterium GW2011_GWA2_42_32 UP000033999 1619041 None 865 4 869 Candidatus Magasanikbacteria bacterium GW2011_GWA2_45_39 UP000034175 1619042 None 577 15 592 Candidatus Magasanikbacteria bacterium GW2011_GWA2_46_17 UP000033982 1619043 None 310 2 312 Candidatus Magasanikbacteria bacterium GW2011_GWA2_50_22 UP000033870 1619044 None 1160 2 1162 Candidatus Magasanikbacteria bacterium GW2011_GWA2_56_11 UP000034927 1619045 None 363 0 363 Candidatus Magasanikbacteria bacterium GW2011_GWC2_34_16 UP000034849 1619046 None 1011 1 1012 Candidatus Magasanikbacteria bacterium GW2011_GWC2_37_14 UP000034108 1619048 None 769 1 770 Candidatus Magasanikbacteria bacterium GW2011_GWC2_41_17 UP000034449 1619049 None 1153 1 1154 Candidatus Magasanikbacteria bacterium GW2011_GWC2_42_27 UP000033423 29290 None 6386 61 6537 Candidatus Magnetobacterium bavaricum UP000037988 1509431 None 10886 38 11022 Candidatus Magnetomorum sp. HK-1 UP000033718 1609970 None 4070 37 4121 Candidatus Magnetoovum chiemensis UP000014070 1295009 None 1819 7 1826 Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 UP000012672 1236689 None 1641 2 1646 Candidatus Methanomethylophilus alvus Mx1201 UP000050360 1719120 None 4509 18 4528 Candidatus Methanoperedens sp. BLZ1 UP000030787 1577791 None 1393 0 1404 Candidatus Methanoplasma termitum UP000006898 671143 None 2995 62 3071 Candidatus Methylomirabilis oxyfera UP000018291 1229780 None 4190 55 4245 Candidatus Microthrix parvicella RN1 UP000034867 1618695 None 605 0 607 Candidatus Moranbacteria bacterium GW2011_GWA2_39_41 UP000034716 1618699 None 1157 2 1159 Candidatus Moranbacteria bacterium GW2011_GWC2_40_12 UP000034945 1618707 None 1294 5 1299 Candidatus Moranbacteria bacterium GW2011_GWE1_35_17 UP000033960 1618712 None 902 1 903 Candidatus Moranbacteria bacterium GW2011_GWE2_35_2- UP000033827 1618713 None 968 1 969 Candidatus Moranbacteria bacterium GW2011_GWE2_36_40 UP000034744 1618714 None 1031 0 1031 Candidatus Moranbacteria bacterium GW2011_GWE2_47_10 UP000034605 1618715 None 1233 0 1233 Candidatus Moranbacteria bacterium GW2011_GWF1_34_10 UP000034485 1618718 None 1083 1 1087 Candidatus Moranbacteria bacterium GW2011_GWF1_36_78 UP000034839 1618721 None 1017 2 1019 Candidatus Moranbacteria bacterium GW2011_GWF2_35_39 UP000030066 1318617 None 572 0 572 Candidatus Mycoplasma girerdii UP000015382 1343077 None 137 0 137 Candidatus Nasuia deltocephalinicola str. NAS-ALF UP000033562 1359163 None 1013 4 1019 Candidatus Neoehrlichia lotoris str. RAC413 UP000004348 886738 None 2031 7 2038 Candidatus Nitrosoarchaeum limnia SFB1 UP000030944 1410606 None 1428 16 1445 Candidatus Nitrosopelagicus brevis UP000033923 1618727 None 280 7 287 Candidatus Nomurabacteria bacterium GW2011_GWA1_35_8 UP000034107 1618732 None 951 24 975 Candidatus Nomurabacteria bacterium GW2011_GWA1_46_11 UP000034749 1618734 None 666 3 669 Candidatus Nomurabacteria bacterium GW2011_GWA2_40_9 UP000033876 1618742 None 831 0 831 Candidatus Nomurabacteria bacterium GW2011_GWB1_37_5 UP000034452 1618744 None 587 0 587 Candidatus Nomurabacteria bacterium GW2011_GWB1_40_7 UP000034751 1618747 None 814 2 816 Candidatus Nomurabacteria bacterium GW2011_GWB1_43_7 UP000034879 1618749 None 577 4 581 Candidatus Nomurabacteria bacterium GW2011_GWB1_47_6 UP000033949 1618755 None 593 0 593 Candidatus Nomurabacteria bacterium GW2011_GWC2_41_8 UP000034952 1618761 None 825 1 826 Candidatus Nomurabacteria bacterium GW2011_GWE1_35_16 UP000034934 1618767 None 773 5 778 Candidatus Nomurabacteria bacterium GW2011_GWF1_31_48 UP000034011 1618775 None 800 0 800 Candidatus Nomurabacteria bacterium GW2011_GWF2_36_19 UP000034301 1618776 None 760 0 760 Candidatus Nomurabacteria bacterium GW2011_GWF2_40_12 UP000033907 1618778 None 666 0 667 Candidatus Nomurabacteria bacterium GW2011_GWF2_43_24 UP000033428 1609969 None 2567 6 2980 Candidatus Omnitrophus magneticus UP000034432 1618469 None 921 1 922 Candidatus Pacebacteria bacterium GW2011_GWA1_46_10 UP000016900 1235990 None 814 11 1374 Candidatus Pantoea carbekii UP000028926 91604 None 1802 1 1826 Candidatus Paracaedibacter acanthamoebae UP000034415 1619057 None 1344 3 1347 Candidatus Peregrinibacteria bacterium GW2011_GWA2_44_7 UP000034737 1619058 None 702 7 709 Candidatus Peregrinibacteria bacterium GW2011_GWA2_47_7 UP000034940 1619059 None 1125 0 1125 Candidatus Peregrinibacteria bacterium GW2011_GWA2_54_9 UP000034765 1619061 None 1287 5 1292 Candidatus Peregrinibacteria bacterium GW2011_GWC2_33_13 UP000034183 1619065 None 1387 7 1395 Candidatus Peregrinibacteria bacterium GW2011_GWF2_33_10 UP000033957 1619066 None 1158 4 1162 Candidatus Peregrinibacteria bacterium GW2011_GWF2_38_29 UP000034818 1619067 None 1121 6 1127 Candidatus Peregrinibacteria bacterium GW2011_GWF2_39_17 UP000034674 1619068 None 1131 1 1135 Candidatus Peregrinibacteria bacterium GW2011_GWF2_43_17 UP000034858 1619063 None 1237 1 1238 Candidatus Peribacteria bacterium GW2011_GWC2_54_8 UP000032160 1458461 None 3287 8 3295 Candidatus Phaeomarinobacter ectocarpi UP000032891 69896 None 520 0 680 Candidatus Phytoplasma solani UP000032810 91844 None 278 0 301 Candidatus Portiera aleyrodidarum UP000015216 669502 None 372 0 372 Candidatus Profftella armatura UP000004116 1005043 None 2265 4 2271 Candidatus Regiella insecticola 5.15 UP000005726 663321 None 1359 9 1491 Candidatus Regiella insecticola LSR1 UP000037178 1675527 None 4734 29 4787 Candidatus Rhodobacter lobularis UP000034349 1618475 None 592 1 593 Candidatus Roizmanbacteria bacterium GW2011_GWA2_32_13 UP000034688 1618477 None 482 0 482 Candidatus Roizmanbacteria bacterium GW2011_GWA2_34_18 UP000034457 1618478 None 1194 4 1198 Candidatus Roizmanbacteria bacterium GW2011_GWA2_35_19 UP000034536 1618479 None 633 0 633 Candidatus Roizmanbacteria bacterium GW2011_GWA2_35_8 UP000034344 1618480 None 552 0 552 Candidatus Roizmanbacteria bacterium GW2011_GWA2_36_23 UP000034471 1618481 None 1067 2 1070 Candidatus Roizmanbacteria bacterium GW2011_GWA2_37_7 UP000034004 1618484 None 782 1 783 Candidatus Roizmanbacteria bacterium GW2011_GWC2_34_23 UP000034917 1618486 None 1010 0 1010 Candidatus Roizmanbacteria bacterium GW2011_GWC2_37_13 UP000034371 1618487 None 1041 8 1049 Candidatus Roizmanbacteria bacterium GW2011_GWC2_41_7 UP000051916 1640509 None 3007 54 3061 Candidatus Rokubacteria bacterium CSP1-6 UP000034708 1619069 None 737 10 747 Candidatus Saccharibacteria bacterium GW2011_GWA2_46_10 UP000035655 1619070 None 1079 12 1091 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 UP000034790 1619071 None 1172 0 1172 Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9 UP000018523 1394711 None 919 1 920 Candidatus Saccharibacteria bacterium RAAC3_TM7_1 UP000030902 1476577 None 692 0 692 Candidatus Saccharibacteria oral taxon TM7x UP000013893 1332188 None 1027 6 1034 Candidatus Saccharimonas aalborgensis UP000030652 237368 None 3975 39 4016 Candidatus Scalindua brodae UP000034231 1618488 None 1054 2 1056 Candidatus Shapirobacteria bacterium GW2011_GWE1_38_10 UP000034406 1618490 None 902 0 902 Candidatus Shapirobacteria bacterium GW2011_GWE2_38_30 UP000017184 946483 None 2605 4 2626 Candidatus Symbiobacter mobilis CR UP000050180 467085 None 2287 3 2302 Candidatus Symbiothrix dinenymphae UP000035054 1608213 None 1904 106 2010 Candidatus Synechococcus spongiarum 142 UP000035067 1604020 None 1684 10 1694 Candidatus Synechococcus spongiarum SP3 UP000031627 1410383 None 611 2 614 Candidatus Tachikawaea gelatinosa UP000030428 1003181 None 7188 119 9975 Candidatus Thiomargarita nelsonii UP000014632 1266371 None 175 0 175 Candidatus Tremblaya phenacola PAVE UP000008393 1053648 None 115 0 116 Candidatus Tremblaya princeps PCVAL UP000034054 1618979 None 784 1 785 Candidatus Uhrbacteria bacterium GW2011_GWA2_52_8d UP000034711 1618980 None 541 1 542 Candidatus Uhrbacteria bacterium GW2011_GWA2_53_10 UP000033930 1618983 None 881 1 882 Candidatus Uhrbacteria bacterium GW2011_GWC1_41_20 UP000033865 1618986 None 627 0 627 Candidatus Uhrbacteria bacterium GW2011_GWC2_53_7 UP000034846 1618989 None 920 0 920 Candidatus Uhrbacteria bacterium GW2011_GWD2_52_7 UP000033935 1618995 None 1081 1 1082 Candidatus Uhrbacteria bacterium GW2011_GWF2_39_13 UP000034197 1618996 None 1039 2 1041 Candidatus Uhrbacteria bacterium GW2011_GWF2_40_263 UP000034746 1618997 None 1266 5 1271 Candidatus Uhrbacteria bacterium GW2011_GWF2_41_16 UP000034154 1619000 None 1030 0 1030 Candidatus Uhrbacteria bacterium GW2011_GWF2_44_350 UP000034705 1619001 None 1024 1 1025 Candidatus Uhrbacteria bacterium GW2011_GWF2_46_218 UP000011174 1133592 None 227 0 227 Candidatus Uzinura diaspidicola str. ASNER UP000034591 1618545 None 852 0 852 Candidatus Woesebacteria bacterium GW2011_GWA1_37_7 UP000034246 1618550 None 1067 2 1069 Candidatus Woesebacteria bacterium GW2011_GWA1_39_21 UP000034793 1618552 None 1140 19 1159 Candidatus Woesebacteria bacterium GW2011_GWA1_39_8 UP000034676 1618555 None 822 3 825 Candidatus Woesebacteria bacterium GW2011_GWA1_41_13b UP000034653 1618559 None 235 0 235 Candidatus Woesebacteria bacterium GW2011_GWA1_45_8 UP000033995 1618561 None 1044 0 1044 Candidatus Woesebacteria bacterium GW2011_GWA2_33_28 UP000034562 1618563 None 692 0 692 Candidatus Woesebacteria bacterium GW2011_GWA2_40_7b UP000034826 1618564 None 929 16 945 Candidatus Woesebacteria bacterium GW2011_GWA2_44_33 UP000034778 1618566 None 997 1 998 Candidatus Woesebacteria bacterium GW2011_GWB1_33_22 UP000034181 1618569 None 949 21 970 Candidatus Woesebacteria bacterium GW2011_GWB1_38_5b UP000034081 1618570 None 1390 4 1394 Candidatus Woesebacteria bacterium GW2011_GWB1_38_8 UP000034774 1618572 None 1169 3 1172 Candidatus Woesebacteria bacterium GW2011_GWB1_39_10 UP000033881 1618574 None 1815 2 1817 Candidatus Woesebacteria bacterium GW2011_GWB1_39_12 UP000034687 1618575 None 336 0 336 Candidatus Woesebacteria bacterium GW2011_GWB1_40_101 UP000033858 1618577 None 593 2 595 Candidatus Woesebacteria bacterium GW2011_GWB1_41_10 UP000034090 1618578 None 915 6 922 Candidatus Woesebacteria bacterium GW2011_GWB1_43_14 UP000034192 1618580 None 302 3 305 Candidatus Woesebacteria bacterium GW2011_GWB1_44_11b UP000034329 1618581 None 750 5 755 Candidatus Woesebacteria bacterium GW2011_GWB1_45_5 UP000034096 1618583 None 1017 2 1019 Candidatus Woesebacteria bacterium GW2011_GWC1_38_13 UP000034611 1618585 None 341 5 346 Candidatus Woesebacteria bacterium GW2011_GWC1_43_10b UP000034803 1618586 None 921 0 921 Candidatus Woesebacteria bacterium GW2011_GWC2_31_9 UP000034942 1618595 None 795 1 796 Candidatus Woesebacteria bacterium GW2011_GWD2_40_19 UP000034086 1618598 None 682 0 682 Candidatus Woesebacteria bacterium GW2011_GWE1_45_18 UP000033882 1619005 None 1060 10 1070 Candidatus Wolfebacteria bacterium GW2011_GWA2_47_9b UP000033918 1619006 None 679 9 688 Candidatus Wolfebacteria bacterium GW2011_GWB1_41_12 UP000034044 1619010 None 596 1 597 Candidatus Wolfebacteria bacterium GW2011_GWC1_37_10 UP000034810 1619011 None 677 3 680 Candidatus Wolfebacteria bacterium GW2011_GWC1_43_10 UP000034665 1619013 None 1008 1 1009 Candidatus Wolfebacteria bacterium GW2011_GWC2_39_22 UP000018951 1401685 None 954 2 956 Candidatus Xenolissoclinum pacificiensis L6 UP000034845 1619019 None 337 1 338 Candidatus Yanofskybacteria bacterium GW2011_GWA1_39_13 UP000034380 1619020 None 317 6 323 Candidatus Yanofskybacteria bacterium GW2011_GWA1_41_6 UP000034403 1619022 None 328 0 328 Candidatus Yanofskybacteria bacterium GW2011_GWA1_48_10 UP000033903 1619023 None 259 0 259 Candidatus Yanofskybacteria bacterium GW2011_GWA2_41_22 UP000033846 1619024 None 549 0 549 Candidatus Yanofskybacteria bacterium GW2011_GWA2_44_10 UP000034032 1619025 None 973 2 975 Candidatus Yanofskybacteria bacterium GW2011_GWA2_44_9 UP000033859 1619029 None 666 4 670 Candidatus Yanofskybacteria bacterium GW2011_GWC2_41_9 UP000034764 1619031 None 554 0 554 Candidatus Yanofskybacteria bacterium GW2011_GWD2_39_48 UP000034072 1619033 None 792 0 792 Candidatus Yanofskybacteria bacterium GW2011_GWE2_40_11 UP000008788 766192 COPV6 7 0 7 Canine oral papillomavirus (strain Y62) (COPV) UP000052080 360397 None 6 0 6 Canine papillomavirus 3 UP000052101 292792 None 8 0 8 Canis familiaris papillomavirus 2 UP000002254 9615 CANLF 19644 5897 25636 Canis lupus familiaris (Dog) (Canis familiaris) UP000045051 28188 None 2192 10 3675 Capnocytophaga canimorsus UP000008895 860228 CAPCC 2392 2 2405 Capnocytophaga canimorsus (strain 5) UP000038055 28189 None 2431 8 2878 Capnocytophaga cynodegmi UP000006650 521097 CAPOD 2168 3 2171 Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / NCTC 12371 / VPI 2845) (Bacteroides ochraceus) UP000030579 706436 None 2524 1 2525 Capnocytophaga sp. oral taxon 329 str. F0087 UP000010419 1127692 None 2703 2 2706 Capnocytophaga sp. oral taxon 332 str. F0381 UP000003023 888059 None 2441 3 2445 Capnocytophaga sp. oral taxon 338 str. F0234 UP000052097 338903 None 7 0 7 Capra hircus papillomavirus 1 UP000019484 1182541 None 9227 3 9231 Capronia coronata CBS 617.96 UP000019478 1182542 None 10467 2 10469 Capronia epimyces CBS 606.96 UP000008743 595528 CAPO3 8738 1056 9814 Capsaspora owczarzaki (strain ATCC 30864) UP000029121 81985 None 26699 1340 28120 Capsella rubella UP000002706 246194 CARHZ 2607 8 2620 Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) UP000003996 1231626 None 881 6 904 Cardinium endosymbiont cEper1 of Encarsia pergandiella UP000004870 638300 None 2549 31 2581 Cardiobacterium hominis ATCC 15826 UP000004750 797473 None 3021 5 3026 Cardiobacterium valvarum F0432 UP000006709 652111 CARMS 4 0 4 Carnation mottle virus (isolate China/Shanghai) (CarMV) UP000051658 1449336 None 2379 19 2398 Carnobacterium divergens DSM 20623 UP000017469 1266845 None 2236 33 2275 Carnobacterium inhibens subsp. gilichinskyi UP000000212 1234679 None 3250 289 3581 Carnobacterium maltaromaticum LMA28 UP000002244 38062 CSVMV 5 0 5 Cassava vein mosaic virus (CsVMV) UP000019805 1437824 None 3560 15 3616 Castellaniella defragrans 65Phen UP000052093 1352235 None 5 0 5 Castor canadensis papillomavirus 1 UP000034076 270498 None 3125 23 3159 Catabacter hongkongensis UP000016057 1234409 None 1190 6 1197 Catellicoccus marimammalium M35/04/3 UP000018308 1262767 None 1980 12 1992 Catenibacterium sp. CAG:290 UP000019276 1328313 None 3816 19 3835 Catenovulum agarivorans DS-2 UP000000851 479433 CATAD 8826 83 8914 Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) UP000018227 592026 None 3275 13 3291 Catonella morbi ATCC 51271 UP000002501 10648 CAMVS 6 0 6 Cauliflower mosaic virus (strain Strasbourg) (CaMV) UP000001816 190650 CAUCR 3715 5 3744 Caulobacter crescentus (strain ATCC 19089 / CB15) UP000013922 1204537 None 318 0 619 Caulobacter phage phiCbK UP000001316 366602 CAUSK 5347 26 5438 Caulobacter sp. (strain K31) UP000005447 10141 CAVPO 18711 1235 19982 Cavia porcellus (Guinea pig) UP000004478 1225176 None 4213 0 4213 Cecembia lonarensis LW9 UP000029516 158822 None 4354 45 4606 Cedecea neteri UP000006762 1208323 None 4169 29 4198 Celeribacter baekdonensis B30 UP000031521 1208324 None 4619 46 4827 Celeribacter indicus UP000029839 947969 None 3383 24 3418 Cellulomonas carbonis T26 UP000029833 1408250 None 3537 23 3560 Cellulomonas cellasea DSM 20118 UP000008460 590998 CELFA 3738 22 3762 Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) UP000000849 446466 CELFN 3648 25 3678 Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) UP000000485 593907 CELGA 3129 24 3164 Cellulomonas gilvus (strain ATCC 13127 / NRRL B-14078) (Cellvibrio gilvus) UP000036147 1672219 None 3101 62 3163 Cellulomonas sp. A375-1 UP000051941 1736609 None 3813 24 3837 Cellulomonas sp. Root930 UP000008634 688270 CELAD 4092 22 4163 Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) UP000007487 867900 CELLC 3269 12 3284 Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) UP000008467 642492 CELLD 4124 26 4182 Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) (Clostridium lentocellum) UP000035265 264251 None 3946 34 3980 Cellulosimicrobium funkei UP000028634 1523621 None 2049 32 2087 Cellulosimicrobium sp. MM UP000001036 498211 CELJU 3701 10 3753 Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp. cellulosa) UP000003395 1134474 None 4254 50 4304 Cellvibrio sp. BR UP000000758 414004 CENSY 2016 6 2025 Cenarchaeum symbiosum (strain A) UP000034841 88771 CERFI 5619 1 5622 Ceratocystis fimbriata f. sp. platani UP000016930 914234 CERS8 12076 2 12123 Ceriporiopsis subvermispora (strain B) (White-rot fungus) (Gelatoporia subvermispora) UP000011910 1279009 None 4225 0 4227 Cesiribacter andamanensis AMV16 UP000017081 1319815 None 2957 17 2975 Cetobacterium somerae ATCC BAA-474 UP000052105 1382995 None 3 0 3 Chaetoceros sp. DNA virus 7 UP000001056 306901 CHAGB 11041 0 11049 Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) (Soil fungus) UP000008066 759272 CHATD 7182 0 7183 Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) UP000031515 8897 CHAPE 3162 0 3185 Chaetura pelagica (Chimney swift) UP000010366 1173020 None 5764 51 5945 Chamaesiphon minutus PCC 6605 UP000019030 1441930 None 4484 37 4540 Chania multitudinisentens RB-25 UP000001820 266779 CHESB 4509 21 4543 Chelativorans sp. (strain BNC1) UP000031443 8469 CHEMY 18959 1 18988 Chelonia mydas (Green sea-turtle) (Chelonia agassizi) UP000030380 505317 None 2279 5 2284 Chelonobacter oris UP000006923 650137 CRLVP 2 0 2 Cherry rasp leaf virus (isolate Potato/United States) (CRLV) UP000007528 73475 CAVC1 3 0 3 Chicken anemia virus (isolate Germany Cuxhaven-1) (CAV) UP000000569 371094 CHIKS 2 0 2 Chikungunya virus (strain S27-African prototype) (CHIKV) UP000017148 1313304 None 2288 16 2304 Chitinivibrio alkaliphilus ACht1 UP000002215 485918 CHIPD 7150 29 7192 Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) UP000002125 10857 BPCHP 8 0 8 Chlamydia phage 1 (Bacteriophage Chp1) UP000014827 1112230 None 2855 16 2871 Chlamydia psittaci 84-8471/1 UP000039860 1444712 None 2429 2 2446 Chlamydia sp. 'Rubis' UP000050023 813 CHLTH 1305 12 4489 Chlamydia trachomatis UP000000431 272561 CHLTR 895 0 895 Chlamydia trachomatis (strain D/UW-3/Cx) UP000051986 1704235 None 984 2 986 Chlamydiae bacterium SM23_39 UP000006906 3055 CHLRE 14266 72 14483 Chlamydomonas reinhardtii (Chlamydomonas smithii) UP000006791 981222 CHLTF 3029 24 3054 Chloracidobacterium thermophilum (strain B) UP000008141 554065 CHLVA 9829 2 9861 Chlorella variabilis (Green alga) UP000002708 340177 CHLCH 1977 9 1997 Chlorobium chlorochromatii (strain CaD3) UP000004162 377431 None 2150 8 2158 Chlorobium ferrooxidans DSM 13031 UP000002709 319225 CHLL7 2070 5 2080 Chlorobium luteolum (strain DSM 273 / 2530) (Pelodictyon luteolum) UP000001228 331678 CHLPB 2420 14 2469 Chlorobium phaeobacteroides (strain BS1) UP000008701 290317 CHLPD 2568 11 2650 Chlorobium phaeobacteroides (strain DSM 266) UP000028104 1519464 None 2169 12 2181 Chlorobium sp. GBChlB UP000001007 194439 CHLTE 2249 1 2254 Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) UP000029965 60711 CHLSB 19116 125 19269 Chlorocebus sabaeus (Green monkey) (Cercopithecus sabaeus) UP000051896 1640513 None 2431 31 2464 Chloroflexi bacterium CSP1-4 UP000002008 324602 CHLAA 3819 31 3853 Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) UP000001208 517418 CHLT3 2695 13 2710 Chloroherpeton thalassium (strain ATCC 35110 / GB-78) UP000019678 1192034 None 9000 37 9037 Chondromyces apiculatus DSM 436 UP000036114 1628212 None 4183 32 4234 Chromobacterium sp. LK11 UP000001424 243365 CHRVO 4382 15 4404 Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) UP000000239 290398 CHRSD 3289 9 3298 Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) UP000032452 1618023 None 4320 46 4367 Chroococcales cyanobacterium CENA595 UP000010384 251229 None 5677 63 5752 Chroococcidiopsis thermalis PCC 7203 UP000035213 1324352 None 3800 13 3832 Chryseobacterium gallinarum UP000035900 1304281 None 2781 3 2786 Chryseobacterium koreense CCUG 49689 UP000043556 1300143 None 4386 0 4387 Chryseobacterium oranimense G311 UP000031275 510955 None 2085 2 2088 Chryseobacterium solincola UP000036769 1681828 None 3262 5 3267 Chryseobacterium sp. Hurlbut01 UP000051405 1736289 None 3017 4 3021 Chryseobacterium sp. Leaf180 UP000037460 1460289 None 16663 16 16762 Chrysochromulina sp. CCMP291 UP000051809 75695 None 2814 37 2851 Chrysosporum ovalisporum UP000005824 497964 None 6690 15 6716 Chthoniobacter flavus Ellin428 UP000014227 1303518 CHTCT 2798 11 2809 Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49) UP000008144 7719 CIOIN 16641 668 17317 Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis) UP000007875 51511 CIOSA 11584 8420 20029 Ciona savignyi (Pacific transparent sea squirt) UP000003110 766499 None 4546 27 4573 Citreicella sp. 357 UP000005759 501479 None 5410 10 5427 Citreicella sp. SE45 UP000008148 290338 CITK8 4988 31 5031 Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) UP000001889 637910 CITRI 4713 79 4913 Citrobacter rodentium (strain ICC168) (Citrobacter freundii biotype 4280) UP000050479 1647104 None 3053 10 3063 Citromicrobium sp. RCC1885 UP000030687 85681 None 24912 6361 31329 Citrus clementina UP000006933 686981 CLBVS 3 0 3 Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984) (CLBV) UP000001101 686950 CILVC 6 0 6 Citrus leprosis virus C (isolate Citrus sinesis/Brazil/Cordeiropolis/2003) (CiLV-C) UP000009269 652963 CPSVP 4 0 4 Citrus psorosis virus (isolate Spain/P-121) (CPsV) (Citrus ringspot virus) UP000027120 2711 CITSI 28120 15884 44021 Citrus sinensis (Sweet orange) (Citrus aurantium var. sinensis) UP000019471 1182543 None 13416 1 13421 Cladophialophora psammophila CBS 110553 UP000019473 1182544 None 10116 2 10118 Cladophialophora yegresii CBS 114405 UP000001318 31964 CLAMS 3021 37 3120 Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum) UP000016801 1111077 CLAP2 8814 0 8817 Claviceps purpurea (strain 20.1) (Ergot fungus) (Sphacelia segetum) UP000007703 306902 CLAL4 5932 0 5936 Clavispora lusitaniae (strain ATCC 42720) (Yeast) (Candida lusitaniae) UP000023044 866499 None 1081 1 1082 Cloacibacillus evryensis DSM 19522 UP000002019 459349 CLOAI 1803 10 1815 Cloacimonas acidaminovorans (strain Evry) UP000008909 79923 CLOSI 13587 19 13634 Clonorchis sinensis (Chinese liver fluke) UP000033488 1629719 None 3790 41 3868 Clostridiaceae bacterium BRH_c20a UP000004695 457421 None 6030 221 6251 Clostridiales bacterium 1_7_47FAA UP000034222 1605376 None 4198 57 4257 Clostridiales bacterium PH28_bin88 UP000029601 1230734 None 1149 2 1151 Clostridiales bacterium S5-A14a UP000016490 1321778 None 4662 40 4703 Clostridiales bacterium oral taxon 876 str. F0540 UP000035704 84022 None 3835 0 6798 Clostridium aceticum UP000000814 272562 CLOAB 3757 90 3847 Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) UP000006094 1128398 CLOA9 2837 2 2842 Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) UP000031366 1418104 None 4155 118 4279 Clostridium argentinense CDC 2741 UP000017590 1341692 None 3984 29 4024 Clostridium autoethanogenum DSM 10061 UP000030635 1415775 None 3084 83 3169 Clostridium baratii str. Sullivan UP000017980 1263063 None 2667 19 2686 Clostridium bartlettii CAG:1329 UP000000565 290402 CLOB8 4948 55 5020 Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium acetobutylicum) UP000017941 1263064 None 4813 49 4862 Clostridium bolteae CAG:59 UP000019426 1216932 None 3247 22 3292 Clostridium bornimense UP000001195 935198 CLOBB 3407 66 3475 Clostridium botulinum (strain Eklund 17B / Type B) UP000001986 441771 CLOBH 3541 49 3593 Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) UP000003482 445337 None 2516 36 2578 Clostridium botulinum C str. Eklund UP000015064 1302425 None 2459 16 2475 Clostridium botulinum CFSAN002367 UP000003081 632245 None 4148 97 4301 Clostridium butyricum E4 str. BoNT E BL5262 UP000010420 545697 None 3434 19 3453 Clostridium celatum DSM 1785 UP000001349 394503 CLOCE 3261 26 3390 Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) UP000002730 573061 CLOC7 4172 39 4254 Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) UP000018215 1351755 None 1974 582 2556 Clostridium chauvoei JF4335 UP000005435 720554 CLOCD 3746 28 3892 Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) UP000018009 1263065 None 4105 47 4153 Clostridium clostridioforme CAG:132 UP000013097 999411 None 3255 39 3296 Clostridium colicanis 209318 UP000018246 1263067 None 4699 53 4753 Clostridium hathewayi CAG:224 UP000016721 1294142 None 4310 37 4367 Clostridium intestinale URNW UP000002411 431943 CLOK5 3808 20 3913 Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) UP000018168 1263068 None 2470 12 2482 Clostridium leptum CAG:27 UP000018368 1263069 None 2297 24 2321 Clostridium nexile CAG:348 UP000008220 386415 CLONN 2272 33 2325 Clostridium novyi (strain NT) UP000013523 86416 None 4407 47 4512 Clostridium pasteurianum BC1 UP000030905 1262449 None 3928 2 7981 Clostridium pasteurianum DSM 525 = ATCC 6013 UP000000818 195102 CLOPE 2646 75 2722 Clostridium perfringens (strain 13 / Type A) UP000006649 1283341 BPPCD 79 0 79 Clostridium phage phiCD119 (strain Clostridium difficile/United States/Govind/2006) (Bacteriophage phiCD119) UP000000370 357809 CLOPH 3856 35 3902 Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) (Lachnoclostridium phytofermentans) UP000037267 1503 CLOPU 3196 88 3286 Clostridium purinilyticum UP000017118 1345695 None 4353 2 4393 Clostridium saccharobutylicum DSM 13864 UP000001662 610130 CLOSW 4082 51 4154 Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) UP000011728 931276 None 5804 6 5821 Clostridium saccharoperbutylacetonicum N1-4(HMT) UP000033115 1548 CLOSL 5263 58 5333 Clostridium scatologenes UP000032801 1505 CLOSO 3372 93 4227 Clostridium sordellii UP000016486 1507 CLOS4 3679 13 3692 Clostridium sp. (strain ATCC 29733 / VPI C48-50) UP000008937 1042156 CLOSS 2345 256 2619 Clostridium sp. (strain SY8519) UP000017809 457396 None 3359 30 3392 Clostridium sp. 7_2_43FAA UP000012445 97138 None 2779 13 2799 Clostridium sp. ASF356 UP000012582 97139 None 5944 36 6062 Clostridium sp. ASF502 UP000015873 1354301 None 4719 33 4754 Clostridium sp. BL8 UP000018325 1262768 None 1140 2 1142 Clostridium sp. CAG:1000 UP000018382 1262769 None 2428 9 2437 Clostridium sp. CAG:1013 UP000017946 1262770 None 1912 3 1915 Clostridium sp. CAG:1024 UP000018000 1262771 None 1079 1 1080 Clostridium sp. CAG:1193 UP000018225 1262772 None 1040 1 1041 Clostridium sp. CAG:1219 UP000018025 1262774 None 2449 14 2463 Clostridium sp. CAG:127 UP000017905 1262775 None 1738 8 1746 Clostridium sp. CAG:138 UP000018023 1262777 None 1981 13 1994 Clostridium sp. CAG:167 UP000018302 1262778 None 1966 4 1970 Clostridium sp. CAG:169 UP000018364 1262779 None 1740 6 1748 Clostridium sp. CAG:217 UP000018176 1262780 None 2958 27 2985 Clostridium sp. CAG:221 UP000018047 1262781 None 2031 3 2034 Clostridium sp. CAG:226 UP000017961 1262782 None 2197 12 2210 Clostridium sp. CAG:230 UP000017919 1262783 None 2427 6 2433 Clostridium sp. CAG:242 UP000018065 1262784 None 1325 5 1330 Clostridium sp. CAG:245 UP000018071 1262785 None 2520 19 2539 Clostridium sp. CAG:253 UP000018342 1262786 None 2124 12 2136 Clostridium sp. CAG:264 UP000018363 1262788 None 1527 13 1540 Clostridium sp. CAG:269 UP000018327 1262789 None 1181 2 1183 Clostridium sp. CAG:273 UP000018281 1262790 None 2663 26 2689 Clostridium sp. CAG:277 UP000017968 1262791 None 1498 2 1500 Clostridium sp. CAG:288 UP000017929 1262792 None 2423 18 2441 Clostridium sp. CAG:299 UP000018278 1262793 None 1246 2 1248 Clostridium sp. CAG:302 UP000018008 1262794 None 2125 5 2130 Clostridium sp. CAG:306 UP000018128 1262795 None 1649 6 1656 Clostridium sp. CAG:307 UP000018148 1262796 None 1441 2 1443 Clostridium sp. CAG:343 UP000018231 1262797 None 1345 1 1347 Clostridium sp. CAG:349 UP000018340 1262798 None 2085 12 2097 Clostridium sp. CAG:352 UP000018313 1262799 None 1702 5 1707 Clostridium sp. CAG:354 UP000017951 1262800 None 1494 6 1500 Clostridium sp. CAG:356 UP000018022 1262802 None 2600 23 2624 Clostridium sp. CAG:411 UP000018076 1262803 None 2181 16 2197 Clostridium sp. CAG:413 UP000018303 1262804 None 1289 2 1291 Clostridium sp. CAG:417 UP000018284 1262805 None 2255 18 2273 Clostridium sp. CAG:43 UP000018401 1262806 None 1305 3 1308 Clostridium sp. CAG:433 UP000018067 1262807 None 1414 6 1420 Clostridium sp. CAG:440 UP000018074 1262808 None 2079 5 2084 Clostridium sp. CAG:448 UP000017947 1262809 None 1319 3 1322 Clostridium sp. CAG:451 UP000018319 1262810 None 1312 5 1317 Clostridium sp. CAG:452 UP000018244 1262811 None 1172 1 1173 Clostridium sp. CAG:465 UP000018084 1262812 None 1530 5 1535 Clostridium sp. CAG:470 UP000018041 1262813 None 1096 2 1098 Clostridium sp. CAG:492 UP000018120 1262816 None 2522 19 2542 Clostridium sp. CAG:510 UP000018086 1262817 None 1264 1 1265 Clostridium sp. CAG:524 UP000017920 1262818 None 967 2 969 Clostridium sp. CAG:533 UP000017926 1262819 None 1113 5 1118 Clostridium sp. CAG:557 UP000018055 1262820 None 1231 4 1235 Clostridium sp. CAG:567 UP000018045 1262821 None 1209 2 1211 Clostridium sp. CAG:568 UP000018370 1262822 None 1614 6 1620 Clostridium sp. CAG:571 UP000018299 1262823 None 1332 6 1338 Clostridium sp. CAG:575 UP000018263 1262824 None 2644 16 2660 Clostridium sp. CAG:58 UP000017939 1262825 None 2339 15 2354 Clostridium sp. CAG:590 UP000018205 1262826 None 1183 5 1188 Clostridium sp. CAG:594 UP000018389 1262827 None 1195 1 1196 Clostridium sp. CAG:609 UP000018137 1262828 None 2444 8 2452 Clostridium sp. CAG:62 UP000018081 1262829 None 1089 2 1091 Clostridium sp. CAG:628 UP000018242 1262830 None 2219 11 2230 Clostridium sp. CAG:632 UP000017959 1262831 None 2244 6 2250 Clostridium sp. CAG:678 UP000018268 1262832 None 2879 32 2911 Clostridium sp. CAG:7 UP000018190 1262833 None 1167 3 1170 Clostridium sp. CAG:710 UP000018032 1262836 None 2275 11 2286 Clostridium sp. CAG:75 UP000017955 1262837 None 1127 0 1127 Clostridium sp. CAG:762 UP000018374 1262839 None 1191 3 1194 Clostridium sp. CAG:780 UP000018310 1262840 None 1158 5 1163 Clostridium sp. CAG:793 UP000018223 1262841 None 1268 2 1270 Clostridium sp. CAG:798 UP000018381 1262843 None 1823 5 1828 Clostridium sp. CAG:813 UP000018170 1262846 None 1257 5 1262 Clostridium sp. CAG:914 UP000018193 1262847 None 1349 1 1350 Clostridium sp. CAG:921 UP000018136 1262848 None 1852 8 1860 Clostridium sp. CAG:964 UP000003978 556261 None 4454 42 4498 Clostridium sp. D5 UP000005106 641107 None 5586 59 5683 Clostridium sp. DL-VIII UP000037118 747377 None 2693 20 2714 Clostridium sp. DMHC 10 UP000033604 1609975 None 5721 1 5731 Clostridium sp. FS41 UP000030009 1487921 None 3405 46 3453 Clostridium sp. HMP27 UP000016509 1226325 None 6929 30 6959 Clostridium sp. KLE 1755 UP000004073 1105031 None 3468 10 3491 Clostridium sp. MSTE9 UP000001325 1196322 None 5714 64 5778 Clostridium sp. Maddingley MBC34-26 UP000011220 1121335 CLOSH 2664 5 2687 Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) UP000007041 499177 CLOSD 2516 56 2573 Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) UP000028542 318464 None 3114 34 3148 Clostridium sulfidigenes UP000001412 212717 CLOTE 2342 73 2435 Clostridium tetani (strain Massachusetts / E88) UP000025063 1230342 None 4296 58 5262 Clostridium tetanomorphum DSM 665 UP000002145 203119 CLOTH 3084 21 3174 Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium thermocellum) UP000019482 1408889 None 3009 23 3032 Clostridium tyrobutyricum DIVETGP UP000050261 1716176 None 3092 20 3114 Cobetia sp. UCD-24C UP000001261 246410 COCIM 9587 125 9748 Coccidioides immitis (strain RS) (Valley fever fungus) UP000002497 443226 COCPS 10209 3 10228 Coccidioides posadasii (strain RMSCC 757 / Silveira) (Valley fever fungus) UP000007264 574566 None 9763 5 9919 Coccomyxa subellipsoidea C-169 UP000016936 701091 COCH5 12850 7 13316 Cochliobolus heterostrophus (strain C5 / ATCC 48332 / race O) (Southern corn leaf blight fungus) (Bipolaris maydis) UP000016934 665912 COCSN 12172 2 12214 Cochliobolus sativus (strain ND90Pr / ATCC 201652) (Common root rot and spot blotch fungus) (Bipolaris sorokiniana) UP000001461 1005059 CFMVN 4 0 4 Cocksfoot mottle virus (isolate Dactylis glomerata/Norway/CfMV-NO/1995) (CfMV) UP000003835 118168 None 8155 38 8294 Coleofasciculus chthonoplastes PCC 7420 UP000020467 1445577 None 13758 1 13759 Colletotrichum fioriniae PJ7 UP000015530 1237896 COLGC 16385 3 16389 Colletotrichum gloeosporioides (strain Cg-14) (Anthracnose fungus) (Glomerella cingulata) UP000011096 1213859 COLGN 15379 1 15381 Colletotrichum gloeosporioides (strain Nara gc5) (Anthracnose fungus) (Glomerella cingulata) UP000008782 645133 COLGM 12018 1 12020 Colletotrichum graminicola (strain M1.001 / M2 / FGSC 10212) (Maize anthracnose fungus) (Glomerella graminicola) UP000007174 759273 COLHI 16108 2 16141 Colletotrichum higginsianum (strain IMI 349063) (Crucifer anthracnose fungus) UP000014480 1213857 COLOR 13344 1 13346 Colletotrichum orbiculare (strain 104-T / ATCC 96160 / CBS 514.97 / LARS 414 / MAFF 240422) (Cucumber anthracnose fungus) (Colletotrichum lagenarium) UP000027238 1173701 COLSU 12695 2 12699 Colletotrichum sublineola (Sorghum anthracnose fungus) UP000008392 1005048 COLFT 4410 19 4432 Collimonas fungivorans (strain Ter331) UP000003295 521003 None 1762 21 1784 Collinsella intestinalis DSM 13280 UP000018358 1262850 None 1594 7 1601 Collinsella sp. CAG:166 UP000017952 1262851 None 1644 8 1652 Collinsella sp. CAG:289 UP000018185 1262852 None 1827 6 1833 Collinsella sp. CAG:398 UP000003560 445975 None 2502 25 2528 Collinsella stercoris DSM 13279 UP000004830 742742 None 2195 9 2212 Collinsella tanakaei YIT 12063 UP000001675 648168 CTFVL 13 0 13 Colorado tick fever virus (strain USA/Florio N-7180) (CTFV) UP000000547 167879 COLP3 4856 16 4900 Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio psychroerythus) UP000020766 1457173 None 3511 16 3529 Comamonas aquatica DA1877 UP000002360 688245 COMT2 4756 24 4802 Comamonas testosteroni (strain CNB-2) UP000002243 10653 COYMV 3 0 3 Commelina yellow mottle virus (CoYMV) UP000005939 1088868 None 2205 4 2210 Commensalibacter intestini A911 UP000008229 469383 CONWI 5858 54 5914 Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) UP000019205 314285 None 3857 11 3933 Congregibacter litoralis KT71 UP000016924 1168221 CONA1 9306 0 9308 Coniosporium apollinis (strain CBS 100218) (Rock-inhabiting black yeast) UP000001861 240176 COPC7 13332 3 13352 Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) (Inky cap fungus) (Hormographiella aspergillata) UP000003157 469596 None 3811 28 3845 Coprobacillus sp. 29_1 UP000017960 1262853 None 2827 16 2843 Coprobacillus sp. CAG:183 UP000018196 1262854 None 2325 14 2339 Coprobacillus sp. CAG:235 UP000017988 1262855 None 1209 2 1211 Coprobacillus sp. CAG:605 UP000018297 1262856 None 1613 2 1615 Coprobacillus sp. CAG:698 UP000017997 1262857 None 1392 2 1394 Coprobacillus sp. CAG:826 UP000008798 717962 None 2964 21 2985 Coprococcus catus GD/7 UP000017957 1263070 None 2174 24 2198 Coprococcus comes CAG:19 UP000017949 1263071 None 2403 12 2415 Coprococcus eutactus CAG:665 UP000018002 1262863 None 1947 12 1959 Coprococcus sp. CAG:782 UP000001732 309798 COPPD 1477 4 1482 Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) UP000000925 583355 CORAD 3098 12 3120 Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) UP000017918 1262865 None 2053 7 2060 Coraliomargarita sp. CAG:312 UP000007587 1144275 CORCM 8005 14 8033 Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) (Myxococcus coralloides) UP000018256 1262867 None 1296 4 1300 Corallococcus sp. CAG:1435 UP000001610 983644 CORMM 9651 0 9651 Cordyceps militaris (strain CM01) (Caterpillar fungus) UP000031121 1531429 None 1396 9 1408 Coriobacteriaceae bacterium 68-1-3 UP000016652 1111135 None 1606 4 1610 Coriobacteriaceae bacterium BV3Ac1 UP000006851 700015 CORGP 1764 4 1768 Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) UP000016943 1348662 None 1862 8 1875 Corynebacterium argentoratense DSM 44202 UP000028504 191610 None 1525 8 1578 Corynebacterium atypicum UP000002077 548476 CORA7 2524 4 2551 Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) (Corynebacterium nigricans) UP000033566 161896 None 2240 5 2249 Corynebacterium camporealensis UP000019226 1285583 None 2756 13 2809 Corynebacterium casei LMG S-19264 UP000002198 257309 CORDI 2258 7 2271 Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) UP000029914 558173 None 2463 13 2492 Corynebacterium doosanense CAU 212 = DSM 45436 UP000010445 1035195 None 2812 11 2823 Corynebacterium durum F0235 UP000001409 196164 COREF 2938 8 2999 Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) UP000035368 1050174 None 2445 3 2465 Corynebacterium epidermidicanis UP000019232 1451189 None 2230 13 2306 Corynebacterium falsenii DSM 44353 UP000004208 585529 None 2188 28 2226 Corynebacterium genitalium ATCC 33030 UP000006237 548478 None 2704 29 2733 Corynebacterium glucuronolyticum ATCC 51866 UP000000582 196627 CORGL 3092 2 3621 Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) UP000023703 1404245 None 3261 9 3270 Corynebacterium glyciniphilum AJ 3170 UP000011723 1121362 None 2836 17 2865 Corynebacterium halotolerans YIM 70093 = DSM 44683 UP000028780 156978 None 1998 13 2013 Corynebacterium imitans UP000000545 306537 CORJK 2058 6 2120 Corynebacterium jeikeium (strain K411) UP000001473 645127 CORK4 2010 8 2018 Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) UP000033457 35755 None 2044 3 2047 Corynebacterium kutscheri UP000006196 525263 None 2343 28 2371 Corynebacterium lipophiloflavum DSM 44291 UP000031928 1224162 None 2543 4 2550 Corynebacterium marinum DSM 44953 UP000015388 1224163 None 2569 15 2584 Corynebacterium maris DSM 45190 UP000004218 553207 None 2596 23 2619 Corynebacterium matruchotii ATCC 14266 UP000035199 571915 None 3041 5 3110 Corynebacterium mustelae UP000000276 681645 CORP2 2036 54 2091 Corynebacterium pseudotuberculosis (strain C231) UP000000492 662755 CORRG 2153 7 2189 Corynebacterium resistens (strain DSM 45100 / JCM 12819 / GTC 2026) UP000029247 1487956 None 2075 30 2105 Corynebacterium sp. ATCC 6931 UP000017096 1203562 None 2273 12 2316 Corynebacterium sp. KPL1855 UP000017102 1203622 None 2056 10 2072 Corynebacterium sp. KPL1989 UP000050488 1544413 None 2252 0 2252 Corynebacterium sp. NML 130206 UP000005820 525268 None 2638 30 2669 Corynebacterium striatum ATCC 6940 UP000035540 136857 None 2538 5 2560 Corynebacterium testudinoris UP000029569 1401064 None 1781 11 1792 Corynebacterium tuscaniense DNF00037 UP000001727 504474 CORU7 1998 13 2024 Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) UP000028939 401472 None 1826 11 1922 Corynebacterium ureicelerivorans UP000035548 1072256 None 2144 5 2163 Corynebacterium uterequi UP000006659 858619 CORVD 2965 7 3039 Corynebacterium variabile (strain DSM 44702 / JCM 12073 / NCIMB 30131) (Corynebacterium mooreparkense) UP000019222 1224164 None 2549 16 2577 Corynebacterium vitaeruminis DSM 20294 UP000034960 1725 None 1835 8 1843 Corynebacterium xerosis UP000029753 1554483 COSAA 1 0 1 Cosavirus A (isolate Human/Pakistan/0553/-) UP000008787 31553 CRPVK 8 0 8 Cottontail rabbit papillomavirus (strain Kansas) (CRPV) (Papillomavirus sylvilagi) UP000008589 928299 CPMVS 5 0 5 Cowpea mosaic virus (strain SB) (CPMV) UP000002671 227377 COXBU 1813 2 1853 Coxiella burnetii (strain RSA 493 / Nine Mile phase I) UP000051153 1703354 None 2014 43 2057 Coxiella sp. DG_40 UP000051494 1590042 None 2536 1 2557 Coxiellaceae bacterium CC99 UP000051497 1590043 None 3170 0 3189 Coxiellaceae bacterium HT99 UP000005408 29159 CRAGI 25964 18 26086 Crassostrea gigas (Pacific oyster) (Crassostrea angulata) UP000031552 1437425 None 2418 0 2418 Criblamydia sequanensis CRIB-18 UP000001075 10029 CRIGR 23882 2 25016 Cricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus) UP000008590 928300 CRPVC 2 0 2 Cricket paralysis virus (isolate Teleogryllus commodus/Australia/CrPVVIC/1968) (CrPV) UP000008767 652961 CCHFI 3 0 3 Crimean-Congo hemorrhagic fever virus (strain Nigeria/IbAr10200/1970) (CCHFV) UP000010472 1173022 None 4660 37 4752 Crinalium epipsammum PCC 9333 UP000002297 216432 CROAH 2694 8 2702 Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) UP000035287 1348774 None 3396 15 3508 Croceicoccus naphthovorans UP000050280 1300341 None 3674 8 3689 Croceitalea dokdonensis DOKDO 023 UP000003922 165597 None 5626 33 5958 Crocosphaera watsonii WH 8501 UP000000260 290339 CROS8 4409 12 4442 Cronobacter sakazakii (strain ATCC BAA-894) (Enterobacter sakazakii) UP000029864 1001240 None 3230 19 3249 Cryobacterium roopkundense UP000051874 1655587 None 887 1 895 Cryomorphaceae bacterium BACL11 MAG-121001-bin54 UP000051105 1655591 None 1174 3 1181 Cryomorphaceae bacterium BACL18 MAG-120924-bin36 UP000051758 1655592 None 1659 3 1662 Cryomorphaceae bacterium BACL21 MAG-121220-bin10 UP000051665 1655598 None 1269 1 1270 Cryomorphaceae bacterium BACL29 MAG-121220-bin8 UP000051535 1655595 None 1479 2 1481 Cryomorphaceae bacterium BACL7 MAG-121220-bin83 UP000007251 12478 CHPVE 2 0 2 Cryphonectria hypovirus 1 (strain EP713) (CHV-1/EP713) (Chestnut blight fungus hypovirulence-associated virus) UP000001105 186769 CPMV1 1 0 1 Cryphonectria parasitica mitovirus 1 (strain American chestnut tree/New Jersey/NB631) (CMV1) (Cryphonectria mitovirus 1) UP000006719 230407 MYRV9 11 0 11 Cryphonectria parasitica mycoreovirus 1 (strain 9B21) (CpMYRV-1) UP000000954 469378 CRYCD 1350 5 1357 Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3) UP000029445 294750 None 6471 0 6472 Cryptococcus gattii R265 UP000002149 214684 CRYNJ 6602 144 6783 Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (Filobasidiella neoformans) UP000021053 927661 None 4019 14 4035 Cryptosporangium arvum DSM 44712 UP000001460 441375 CRYMR 3930 0 3934 Cryptosporidium muris (strain RN66) UP000006726 353152 CRYPI 3805 0 3806 Cryptosporidium parvum (strain Iowa II) UP000006921 766191 CPVKS 2 0 2 Cryptosporidium parvum virus 1 (strain KSU-1) UP000002502 12307 CMVFN 5 0 5 Cucumber mosaic virus (strain FNY) (CMV) UP000029981 3659 CUCSA 23725 19 23793 Cucumis sativus (Cucumber) UP000006635 645993 NPVCO 109 0 109 Culex nigripalpus nucleopolyhedrovirus (isolate Florida/1997) (CuniNPV) UP000002320 7176 CULQU 18697 6 18915 Culex quinquefasciatus (Southern house mosquito) (Culex pungens) UP000031843 68895 None 7584 59 7661 Cupriavidus basilensis UP000005808 1127483 None 7469 61 7534 Cupriavidus basilensis OR16 UP000002429 266264 CUPMC 5876 488 6490 Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34) (Ralstonia metallidurans) UP000008210 381666 CUPNH 6576 38 6626 Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha) UP000002697 264198 CUPPJ 6394 39 6445 Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia eutropha (strain JMP 134)) UP000019755 1292022 None 3366 20 3386 Curtobacterium flaccumfaciens UCD-AKU UP000050821 1736311 None 3321 22 3343 Curtobacterium sp. Leaf261 UP000051912 1714344 None 3337 16 3359 Curvibacter sp. PAE-UM UP000052110 1016879 None 3 0 3 Cutthroat trout virus UP000007014 280699 CYAM1 4995 1 5005 Cyanidioschyzon merolae (strain 10D) (Red alga) UP000010480 755178 CYAAP 3378 37 3431 Cyanobacterium aponinum (strain PCC 10605) UP000010483 292563 CYASC 2797 34 2837 Cyanobacterium stanieri (strain ATCC 29140 / PCC 7202) UP000010388 292564 CYAGP 3230 31 3280 Cyanobium gracile (strain ATCC 27147 / PCC 6307) UP000003950 180281 None 2753 9 2771 Cyanobium sp. PCC 7001 UP000001203 43989 CYAA5 5209 30 5304 Cyanothece sp. (strain ATCC 51142) UP000002384 65393 CYAP7 5597 59 5710 Cyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC 29155)) UP000002511 395961 CYAP4 5189 43 5327 Cyanothece sp. (strain PCC 7425 / ATCC 29141) UP000008206 497965 CYAP2 6495 64 6642 Cyanothece sp. (strain PCC 7822) UP000008204 41431 CYAP8 4295 40 4367 Cyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 / RF-1)) UP000038830 4903 CYBJA 4876 176 5057 Cyberlindnera jadinii (Torula yeast) (Pichia jadinii) UP000001635 880070 CYCMS 4966 17 5000 Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus marinus) UP000006282 385025 CYCSP 2242 5 2248 Cycloclasticus sp. (strain P1) UP000009249 654905 GVCPM 143 0 143 Cydia pomonella granulosis virus (isolate Mexico/1963) (CpGV) (Cydia pomonella granulovirus) UP000052045 533240 None 3383 41 3449 Cylindrospermopsis raciborskii CS-505 UP000010475 56107 None 6148 52 6229 Cylindrospermum stagnale PCC 7417 UP000030752 1220924 None 11088 2 11094 Cyphellophora europaea CBS 101466 UP000011682 1242864 None 10461 50 10512 Cystobacter fuscus DSM 2262 UP000001822 269798 CYTH3 3499 272 3785 Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) UP000030653 745407 DACSP 10233 0 10240 Dacryopinax sp. (strain DJM 731) (Brown rot fungus) UP000015100 1284197 DACHA 10959 0 10959 Dactylellina haptotyla (strain CBS 200.50) (Nematode-trapping fungus) (Monacrosporium haptotylum) UP000007151 13037 DANPL 16241 12 16254 Danaus plexippus (Monarch butterfly) UP000000437 7955 DANRE 24821 18488 43892 Danio rerio (Zebrafish) (Brachydanio rerio) UP000000305 6669 DAPPU 30109 28 30606 Daphnia pulex (Water flea) UP000000599 284592 DEBHA 6284 0 6292 Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (Yeast) (Torulaspora hansenii) UP000000550 159087 DECAR 4140 15 4171 Dechloromonas aromatica (strain RCB) UP000005633 640081 DECSP 3409 23 3443 Dechlorosoma suillum (strain ATCC BAA-33 / DSM 13638 / PS) (Azospira oryzae) UP000000866 305674 DPV83 159 6 169 Deerpox virus (strain Mule deer/United States/W-848-83/1983) (DPV) UP000001520 639282 DEFDS 2329 9 2374 Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) UP000026305 1417296 None 4086 33 4119 Defluviimonas sp. 20V17 UP000032809 1006576 None 1807 4 1815 Defluviitoga tunisiensis UP000000482 1131462 None 2844 92 2980 Dehalobacter sp. CF UP000008289 243164 DEHM1 1497 5 1580 Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195) (Dehalococcoides ethenogenes (strain 195)) UP000051285 1703394 None 1614 27 1641 Dehalococcoidia bacterium SG8_51_3 UP000002349 552811 DEHLB 1604 15 1659 Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) UP000034106 943347 None 1674 43 1717 Dehalogenimonas sp. WBC-2 UP000002208 546414 DEIDV 3423 36 3466 Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) UP000002431 319795 DEIGD 2993 13 3054 Deinococcus geothermalis (strain DSM 11300) UP000007575 745776 DEIGI 4225 104 4337 Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) UP000008635 709986 DEIML 3250 12 3264 Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) UP000010467 937777 DEIPD 4148 16 4183 Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) UP000007718 693977 DEIPM 2643 9 2656 Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703 / MRP) UP000002524 243230 DEIRA 3079 6 3103 Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) UP000027898 1489678 None 2575 14 2614 Deinococcus sp. RL UP000051726 1704277 None 2381 5 2387 Deinococcus sp. UR1 UP000000784 398578 DELAS 5925 43 6040 Delftia acidovorans (strain DSM 14801 / SPH-1) UP000051991 1640514 None 2107 23 2130 Deltaproteobacteria bacterium CSP1-8 UP000051875 1703397 None 1189 3 1192 Deltaproteobacteria bacterium DG_8 UP000051346 1703398 None 3111 26 3137 Deltaproteobacteria bacterium SG8_13 UP000051218 1703399 None 3502 39 3541 Deltaproteobacteria bacterium SM23_61 UP000030742 77166 DENPD 12061 190 12877 Dendroctonus ponderosae (Mountain pine beetle) UP000002500 11059 DEN1W 1 0 1 Dengue virus type 1 (strain Nauru/West Pac/1974) (DENV-1) UP000002012 522772 DENA2 2888 13 2964 Denitrovibrio acetiphilus (strain DSM 12809 / N2460) UP000014577 1203568 None 2108 12 2133 Dermabacter sp. HFH0086 UP000027986 1274 None 2243 12 2279 Dermacoccus nishinomiyaensis UP000036330 1641401 None 2544 18 2562 Dermacoccus sp. PE3 UP000004046 997346 None 4032 16 4048 Desmospora sp. 8437 UP000009047 644282 DESB2 3243 25 3277 Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) UP000000739 439235 DESAA 5165 33 5255 Desulfatibacillum alkenivorans (strain AK-01) UP000033431 1629708 None 4382 42 4427 Desulfatitalea sp. BRH_c12 UP000010797 871963 DESDL 3277 17 3340 Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) UP000001946 138119 DESHY 4935 79 5060 Desulfitobacterium hafniense (strain Y51) UP000010847 871968 None 3008 21 3046 Desulfitobacterium metallireducens DSM 15288 UP000000483 880072 DESAR 2827 32 2865 Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) UP000005778 879212 None 3365 31 3440 Desulfobacter postgatei 2ac9 UP000051988 1703400 None 2190 46 2237 Desulfobacterales bacterium SG8_35 UP000051714 1703401 None 3033 63 3096 Desulfobacterales bacterium SG8_35_2 UP000000442 177437 DESAH 4824 22 4947 Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) UP000007347 651182 DESTT 4155 34 4375 Desulfobacula toluolica (strain DSM 7467 / Tol2) UP000033378 1629713 None 4825 46 5037 Desulfobulbaceae bacterium BRH_c16a UP000006365 577650 DESPD 3215 44 3283 Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) UP000030148 1536652 None 3172 29 3201 Desulfobulbus sp. Tol-SR UP000011721 1167006 DESSD 3483 31 3532 Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) UP000014977 1121405 None 3810 34 3848 Desulfococcus multivorans DSM 2059 UP000008561 96561 DESOH 3236 19 3265 Desulfococcus oleovorans (strain DSM 6200 / Hxd3) UP000001052 485915 DESRD 2488 12 2526 Desulfohalobium retbaense (strain DSM 5692) UP000002216 525897 DESBD 3392 29 3436 Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) (Desulfovibrio baculatus) UP000006055 706587 DESTA 5376 36 5494 Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) UP000005496 555779 None 3547 30 3663 Desulfonatronospira thiodismutans ASO3-1 UP000027425 159290 None 2803 25 2830 Desulfonatronum thiodismutans UP000008544 477974 DESAP 2115 21 2157 Desulforudis audaxviator (strain MP104C) UP000002892 646529 DESAJ 4441 28 4505 Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) UP000005262 768704 DESMD 4308 32 4352 Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) UP000006346 768706 DESOD 5166 51 5242 Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) (Desulfotomaculum orientis) UP000033442 1617025 None 5450 50 5504 Desulfosporosinus sp. I2 UP000004928 913865 None 6150 55 6209 Desulfosporosinus sp. OT UP000030439 1536651 None 2518 21 2561 Desulfosporosinus sp. Tol-M UP000005104 768710 None 5071 37 5138 Desulfosporosinus youngiae DSM 17734 UP000000602 177439 DESPS 3221 12 3233 Desulfotalea psychrophila (strain LSv54 / DSM 12343) UP000014216 1286635 None 4140 375 4646 Desulfotignum phosphitoxidans DSM 13687 UP000002217 485916 DESAS 3983 33 4068 Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) UP000013520 767817 None 4269 44 4352 Desulfotomaculum gibsoniae DSM 7213 UP000009315 1121428 None 2526 99 2640 Desulfotomaculum hydrothermale Lam5 = DSM 18033 UP000009229 760568 DESK7 3362 23 3398 Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) UP000009226 868595 DESCC 2599 21 2657 Desulfotomaculum nigrificans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) (Desulfotomaculum carboxydivorans) UP000001556 349161 DESRM 3183 37 3276 Desulfotomaculum reducens (strain MI-1) UP000009234 696281 DESRL 3735 28 3796 Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) UP000002191 643562 DESAO 3255 14 3304 Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) UP000007844 690850 None 3670 29 3725 Desulfovibrio africanus str. Walvis Bay UP000002710 207559 DESAG 3204 16 3258 Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans (strain G20)) UP000014975 1121439 None 2912 12 2924 Desulfovibrio alkalitolerans DSM 16529 UP000002598 525146 DESDA 2336 9 2356 Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) UP000007845 641491 None 3429 22 3454 Desulfovibrio desulfuricans ND132 UP000016587 1121448 None 3290 29 3341 Desulfovibrio gigas DSM 1382 = ATCC 19364 UP000011724 1322246 DESPC 3260 82 3354 Desulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30) UP000003676 411464 None 3077 29 3107 Desulfovibrio piger ATCC 29098 UP000002601 526222 DESAD 3785 22 3807 Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) UP000006424 665942 None 3302 10 3326 Desulfovibrio sp. 6_1_46AFAA UP000004662 644968 None 3687 26 3732 Desulfovibrio sp. FW1012B UP000014960 941449 None 3423 21 3445 Desulfovibrio sp. X2 UP000002194 882 DESVH 3513 4 3531 Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) UP000001361 883 DESVM 3169 9 3180 Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) UP000019023 694431 None 1817 8 1833 Desulfurella acetivorans A63 UP000002572 653733 DESIS 2538 13 2571 Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) UP000001508 589865 DESAT 2584 11 2620 Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) UP000007102 868864 DESTD 1493 3 1509 Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) UP000006903 490899 DESK1 1467 3 1471 Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) UP000005695 281689 None 3166 38 3234 Desulfuromonas acetoxidans DSM 684 UP000051310 1735325 None 2726 3 2729 Desulfuromonas sp. SDB UP000006443 555088 None 3139 23 3163 Dethiobacter alkaliphilus AHT 1 UP000032233 1429043 None 5338 57 5400 Dethiosulfatarculus sandiegensis UP000006427 469381 None 2420 12 2458 Dethiosulfovibrio peptidovorans DSM 11002 UP000033649 429727 None 3091 12 3108 Devosia chinhatensis UP000033411 1293439 None 3340 13 3411 Devosia epidermidihirudinis UP000033632 443610 None 3961 31 3996 Devosia geojensis UP000033608 1121477 None 3796 28 3957 Devosia limi DSM 17137 UP000033519 728005 None 3968 32 4038 Devosia psychrophila UP000028981 46914 None 4239 34 4273 Devosia riboflavina UP000033514 361041 None 3675 30 3709 Devosia soli UP000037066 1643450 None 4190 105 4296 Devosia sp. H5989 UP000028638 1502724 None 4111 5 4117 Devosia sp. LC5 UP000051002 1736531 None 5436 36 5472 Devosia sp. Root413D1 UP000051058 1736537 None 3663 27 3690 Devosia sp. Root436 UP000017966 1263072 None 1689 4 1693 Dialister invisus CAG:218 UP000003503 888062 None 1239 3 1243 Dialister micraerophilus DSM 19965 UP000018365 1262869 None 1799 10 1810 Dialister sp. CAG:357 UP000017985 1262870 None 1918 8 1927 Dialister sp. CAG:486 UP000018383 1262871 None 1163 8 1171 Dialister sp. CAG:588 UP000003277 742743 None 2129 11 2155 Dialister succinatiphilus YIT 11850 UP000034680 1214573 None 10702 1 10704 Diaporthe ampelina UP000000248 246195 DICNV 1273 0 1280 Dichelobacter nodosus (strain VCS1703A) UP000006859 198628 DICD3 4513 19 4549 Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937)) UP000007719 515635 DICTD 1731 12 1744 Dictyoglomus turgidum (strain Z-1310 / DSM 6724) UP000002195 44689 DICDI 12731 32 13382 Dictyostelium discoideum (Slime mold) UP000007797 1054147 DICFS 12151 1 12165 Dictyostelium fasciculatum (strain SH3) (Slime mold) UP000001064 5786 DICPU 12347 0 12399 Dictyostelium purpureum (Slime mold) UP000004165 910954 None 3513 24 3538 Dietzia cinnamea P4 UP000006833 398580 DINSH 4030 56 4194 Dinoroseobacter shibae (strain DSM 16493 / NCIMB 14021 / DFL 12) UP000034182 420778 None 9341 1 9343 Diplodia seriata UP000008290 983548 DOKS4 2968 10 2978 Dokdonia sp. (strain 4H-3-7-5) (Krokinobacter sp. (strain 4H-3-7-5)) UP000003599 883103 None 1681 10 1692 Dolosigranulum pigrum ATCC 51524 UP000018109 1263073 None 2441 20 2461 Dorea formicigenerans CAG:28 UP000018333 1263074 None 2167 29 2196 Dorea longicatena CAG:42 UP000014211 1235798 None 5785 39 5892 Dorea sp. 5-2 UP000017921 1262872 None 2134 24 2159 Dorea sp. CAG:105 UP000018262 1262873 None 2186 20 2206 Dorea sp. CAG:317 UP000016933 675120 DOTSN 12399 15 12415 Dothistroma septosporum (strain NZE10 / CBS 128990) (Red band needle blight fungus) (Mycosphaerella pini) UP000023772 1168034 None 3924 16 3971 Draconibacterium orientale UP000038040 318479 DRAME 9430 18 9448 Dracunculus medinensis (Guinea worm) UP000024837 1043628 None 5595 0 5597 Drechslerella stenobrocha 248 UP000007801 7217 DROAN 14249 5115 19546 Drosophila ananassae (Fruit fly) UP000001070 7222 DROGR 14744 10 14999 Drosophila grimshawi (Fruit fly) (Idiomyia grimshawi) UP000000803 7227 DROME 13707 9589 23512 Drosophila melanogaster (Fruit fly) UP000029768 666363 DMSVA 6 0 6 Drosophila melanogaster sigma virus (isolate Drosophila/USA/AP30/2005) (DMelSV) UP000009192 7230 DROMO 13380 4785 18256 Drosophila mojavensis (Fruit fly) UP000008744 7234 DROPE 16746 8 16891 Drosophila persimilis (Fruit fly) UP000001819 46245 DROPS 14555 6603 21272 Drosophila pseudoobscura pseudoobscura (Fruit fly) UP000001292 7238 DROSE 16129 9 16486 Drosophila sechellia (Fruit fly) UP000000304 7240 DROSI 15347 13 15429 Drosophila simulans (Fruit fly) UP000008792 7244 DROVI 13588 4729 18533 Drosophila virilis (Fruit fly) UP000007798 7260 DROWI 13727 1092 14877 Drosophila willistoni (Fruit fly) UP000000515 654931 DXV96 3 0 3 Drosophila x virus (isolate Chung/1996) (DXV) UP000000404 693992 DHAV 1 0 1 Duck hepatitis A virus (strain Duck/Taiwan/03D/2003) (DHAV) UP000009098 644639 DHBVQ 4 1 5 Duck hepatitis B virus (isolate Shanghai/DHBVQCA34) (DHBV) UP000051032 1736266 None 4289 23 4313 Duganella sp. Leaf126 UP000051728 1736489 None 5711 45 5756 Duganella sp. Root198D2 UP000000278 766194 DUGBA 3 0 3 Dugbe virus (isolate ArD44313) (DUGV) UP000002011 471854 DYAFD 5679 24 5719 Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) UP000051810 1736295 None 4967 27 4994 Dyadobacter sp. Leaf189 UP000024387 1379159 None 4329 13 4666 Dyella jiangningensis UP000004913 742766 None 4130 23 4156 Dysgonomonas gadei ATCC BAA-286 UP000006420 742767 None 3406 18 3429 Dysgonomonas mossii DSM 22836 UP000010796 926556 ECHVK 4488 21 4547 Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) UP000019149 6210 ECHGR 11261 18 12505 Echinococcus granulosus (Hydatid tapeworm) UP000017246 6211 ECHMU 10469 3 10611 Echinococcus multilocularis (Fox tapeworm) UP000002630 2880 ECTSI 15903 431 16378 Ectocarpus siliculosus (Brown alga) (Conferva siliculosa) UP000000864 654926 ESV1K 231 0 231 Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) (EsV-1) UP000005314 519989 None 2773 16 2791 Ectothiorhodospira sp. PHS-1 UP000003163 1003232 EDHAE 4189 0 4190 Edhazardia aedis (strain USNM 41457) (Microsporidian parasite) UP000001485 634503 EDWI9 3676 10 3735 Edwardsiella ictaluri (strain 93-146) UP000001377 479437 EGGLE 3039 15 3070 Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) (Eubacterium lentum) UP000008929 502558 EEGSY 2268 406 2680 Eggerthella sp. (strain YY7918) UP000018393 1262874 None 1925 12 1937 Eggerthella sp. CAG:1427 UP000018042 1262875 None 1714 12 1726 Eggerthella sp. CAG:209 UP000018266 1262876 None 1569 12 1581 Eggerthella sp. CAG:298 UP000018088 1262877 None 1374 7 1381 Eggerthella sp. CAG:368 UP000011758 999415 None 1866 8 1884 Eggerthia catenaformis OT 569 = DSM 20559 UP000008320 205920 EHRCR 1099 1 1105 Ehrlichia chaffeensis (strain ATCC CRL-10679 / Arkansas) UP000029764 1560037 BTPV1 4 0 4 Eidolon helvum parvovirus 1 isolate Bat/Ghana/-/2009 UP000005837 546274 None 2610 17 2627 Eikenella corrodens ATCC 23834 UP000018050 5801 EIMAC 6867 0 6867 Eimeria acervulina (Coccidian parasite) UP000030750 51314 None 8711 0 8711 Eimeria brunetti UP000030763 5804 EIMMA 6057 0 6057 Eimeria maxima (Coccidian parasite) UP000030744 44415 None 10057 0 10069 Eimeria mitis UP000030754 51315 None 8608 0 8608 Eimeria necatrix UP000018201 51316 None 7635 0 7635 Eimeria praecox UP000030747 5802 EIMTE 8595 0 8609 Eimeria tenella (Coccidian parasite) UP000050640 1147741 None 9545 14 9559 Elaeophora elaphi UP000028933 1338011 None 4055 6 4076 Elizabethkingia anophelis NUHP1 UP000033774 552518 None 3281 17 3310 Elstera litoralis UP000001029 445932 ELUMP 1524 4 1529 Elusimicrobium minutum (strain Pei191) UP000000560 227321 EMENI 10555 1 17958 Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (Aspergillus nidulans) UP000013827 2903 EMIHU 35673 24 38640 Emiliania huxleyi (Pontosphaera huxleyi) UP000000863 654925 EHV8U 472 0 472 Emiliania huxleyi virus 86 (isolate United Kingdom/English Channel/1999) (EhV-86) UP000034164 1247875 None 9442 2 9444 Emmonsia crescens UAMH 3008 UP000002875 929562 EMTOG 4230 21 4267 Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) UP000000819 284813 ENCCU 2008 0 2093 Encephalitozoon cuniculi (strain GB-M1) (Microsporidian parasite) UP000002319 650129 EMCVR 2 0 2 Encephalomyocarditis virus (strain Rueckert) (EMCV) UP000019373 1263415 ENDPU 9228 0 9238 Endocarpon pusillum (strain Z07020 / HMAS-L-300199) (Lichen-forming fungus) UP000035337 1408281 None 1285 51 1341 Endomicrobium proavitum UP000027997 305900 None 4116 31 4149 Endozoicomonas elysicola UP000028006 1027273 None 3912 36 4155 Endozoicomonas montiporae UP000028073 1137799 None 4370 30 4464 Endozoicomonas numazuensis UP000010294 553217 None 2552 21 2573 Enhydrobacter aerosaccus SK60 UP000031599 215803 None 8132 25 8164 Enhygromyxa salina UP000037425 106592 ENSAD 6517 80 6606 Ensifer adhaerens (Sinorhizobium morelense) UP000001926 5759 ENTHI 7959 0 8165 Entamoeba histolytica UP000014680 370355 None 9857 0 9906 Entamoeba invadens IP1 UP000017834 1399146 None 3910 79 3996 Enterobacter cloacae S611 UP000000230 399742 ENT38 4218 18 4240 Enterobacter sp. (strain 638) UP000002111 10870 BPM13 9 2 11 Enterobacteria phage M13 (Bacteriophage M13) UP000002127 329852 BPMS2 4 0 4 Enterobacteria phage MS2 (Bacteriophage MS2) UP000001832 75723 BPMX1 4 0 4 Enterobacteria phage MX1 (Bacteriophage MX1) UP000002611 10677 BPMU 55 1 58 Enterobacteria phage Mu (Bacteriophage Mu) UP000002132 40631 BPN15 60 0 60 Enterobacteria phage N15 (Bacteriophage N15) UP000001789 10752 BPN4 72 0 72 Enterobacteria phage N4 (Bacteriophage N4) UP000008091 10678 BPP1 110 0 110 Enterobacteria phage P1 (Bacteriophage P1) UP000009092 10679 BPP2 43 0 43 Enterobacteria phage P2 (Bacteriophage P2) UP000007960 10754 BPP22 64 0 64 Enterobacteria phage P22 (Bacteriophage P22) UP000002143 10658 BPPRD 30 1 31 Enterobacteria phage PRD1 (Bacteriophage PRD1) UP000002006 490103 BPE32 128 0 128 Enterobacteria phage Phieco32 (Escherichia coli phage phi32) UP000001721 194966 BPSP6 52 0 52 Enterobacteria phage SP6 (Bacteriophage SP6) UP000001156 12355 BPT1 78 0 78 Enterobacteria phage T1 (Bacteriophage T1) UP000009087 10665 BPT4 273 5 286 Enterobacteria phage T4 (Bacteriophage T4) UP000000840 10760 BPT7 57 2 60 Enterobacteria phage T7 (Bacteriophage T7) UP000001711 10710 LAMBD 66 2 68 Enterobacteria phage lambda (Bacteriophage lambda) UP000000842 204270 BPKMV 49 0 49 Enterobacteria phage phiKMV (Pseudomonas phage phiKMV) UP000005893 1217068 BPPHS 10 1 11 Enterobacteria phage phiX174 (Isolate Sanger) (Bacteriophage phi-X174) UP000038041 51028 ENTVE 12039 20 12059 Enterobius vermicularis (Human pinworm) UP000013777 1158606 None 2361 28 2435 Enterococcus asini ATCC 700915 UP000014104 1140002 None 4409 60 4546 Enterococcus avium ATCC 14025 UP000012675 565655 None 3072 40 3114 Enterococcus casseliflavus EC20 UP000017415 1121864 None 2336 25 2385 Enterococcus cecorum DSM 20682 = ATCC 43198 UP000014113 1121865 None 2294 21 2330 Enterococcus columbae DSM 7374 = ATCC 51263 UP000014127 1139219 None 2591 31 2636 Enterococcus dispar ATCC 51266 UP000001415 226185 ENTFA 3238 2 3267 Enterococcus faecalis (strain ATCC 700802 / V583) UP000014594 1260356 None 3076 29 3105 Enterococcus faecalis 13-SD-W-01 UP000005269 333849 None 3050 9 3114 Enterococcus faecium DO UP000013858 1158608 None 3177 32 3214 Enterococcus haemoperoxidus ATCC BAA-382 UP000002895 768486 ENTHA 2721 22 4892 Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258) UP000010296 888064 None 2334 70 2404 Enterococcus italicus DSM 15952 UP000018580 1300150 None 3117 45 3221 Enterococcus mundtii QU 25 UP000013782 1158607 None 5117 64 5233 Enterococcus pallens ATCC BAA-351 UP000001151 442493 BPPHE 221 0 221 Enterococcus phage phiEF24C (Enterococcus bacteriophage phi-EF24C) UP000000633 673832 None 61 0 61 Enterococcus phage phiFL1A UP000013785 1158610 None 3467 43 3521 Enterococcus phoeniculicola ATCC BAA-412 UP000014136 1139996 None 2551 22 2588 Enterococcus saccharolyticus ATCC 43076 UP000015939 1316414 None 3845 37 3901 Enterococcus sp. HSIEG1 UP000015961 1140003 None 2157 19 2176 Enterococcus sulfureus ATCC 49903 UP000001742 481877 ENTBH 3311 0 3632 Enterocytozoon bieneusi (strain H348) (Microsporidian parasite) UP000028641 1233951 None 3359 8 3367 Epilithonimonas sp. FH1 UP000007639 82830 EBVA8 79 3 83 Epstein-Barr virus (strain AG876) (HHV-4) (Human herpesvirus 4) UP000007640 10377 EBVB9 101 11 113 Epstein-Barr virus (strain B95-8) (HHV-4) (Human herpesvirus 4) UP000000353 299386 EAVBU 9 1 10 Equine arteritis virus (strain Bucyrus) (EAV) UP000007083 82831 EHV2 77 1 78 Equine herpesvirus 2 (strain 86/87) (EHV-2) UP000052084 526413 None 6 0 6 Equine papillomavirus 2 UP000000405 650131 ERBV1 1 0 1 Equine rhinitis B virus 1 (strain Equine/Switzerland/P1436/71/1971) (ERBV-1) (Equine rhinovirus type 2) UP000002281 9796 HORSE 20299 2426 22884 Equus caballus (Horse) UP000008791 654918 ECPVO 7 0 7 Equus caballus papillomavirus 1 (strain Olson) (EcPV-1) UP000052092 940834 None 7 0 7 Equus caballus papillomavirus 3 UP000029774 1559364 ECSVG 3 0 3 Eragrostis curvula streak virus (isolate Eragrostis curvula/South Africa/g382/2008) UP000005990 908337 None 1686 34 1720 Eremococcus coleocola ACS-139-V-Col8 UP000006790 931890 ERECY 4429 0 4434 Eremothecium cymbalariae (strain CBS 270.75 / DBVPG 7215 / KCTC 17166 / NRRL Y-17582) (Yeast) UP000052100 291590 None 7 0 7 Erethizon dorsatum papillomavirus 1 UP000052083 445217 None 7 0 7 Erinaceus europaeus papillomavirus 1 UP000008793 634500 ERWBE 4776 139 4917 Erwinia billingiae (strain Eb661) UP000037088 1560201 None 4044 61 7814 Erwinia iniecta UP000019918 69222 None 3938 21 3991 Erwinia mallotivora UP000050856 1736225 None 4409 22 4431 Erwinia sp. Leaf53 UP000001726 465817 ERWT9 3527 91 3622 Erwinia tasmaniensis (strain DSM 17950 / CIP 109463 / Et1/99) UP000033924 65700 None 3799 8 4146 Erwinia tracheiphila UP000007944 650150 ERYRF 1676 3 1697 Erysipelothrix rhusiopathiae (strain Fujisawa) UP000006223 658659 None 3771 84 3857 Erysipelotrichaceae bacterium 3_1_53 UP000018179 1262981 None 3894 23 3917 Erysipelotrichaceae bacterium CAG:64 UP000030748 4155 ERYGU 27682 995 28818 Erythranthe guttata (Yellow monkey flower) (Mimulus guttatus) UP000027866 39960 None 2974 7 2981 Erythrobacter litoralis UP000008808 314225 ERYLH 2992 7 3011 Erythrobacter litoralis (strain HTCC2594) UP000027647 1044 ERYLO 3208 11 3219 Erythrobacter longus UP000002995 237727 None 3172 5 3177 Erythrobacter sp. NAP1 UP000005498 161528 None 2921 17 2941 Erythrobacter sp. SD-21 UP000049978 1603897 None 3124 9 3211 Erythrobacter sp. SG61-1L UP000000625 83333 ECOLI 4306 8 8434 Escherichia coli (strain K12) UP000019194 1432557 None 6110 20 6140 Escherichia coli ISC11 UP000010297 1115512 None 3891 268 4160 Escherichia hermannii NBRC 105704 UP000010371 1147142 None 60 0 60 Escherichia phage HK578 UP000002107 10726 BPT5 162 1 326 Escherichia phage T5 (Enterobacteria phage T5) UP000029462 1115515 None 3892 304 4196 Escherichia vulneris NBRC 102420 UP000001551 663278 ETHHY 2649 14 2701 Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) UP000019591 1286171 None 2807 36 2910 Eubacterium acidaminophilum DSM 3953 UP000017536 1321814 None 1477 2 1479 Eubacterium brachy ATCC 33089 UP000018093 1263076 None 1920 7 1927 Eubacterium dolichum CAG:375 UP000001476 515620 EUBE2 2739 22 2765 Eubacterium eligens (strain ATCC 27750 / VPI C15-48) UP000018069 1263078 None 2282 27 2309 Eubacterium hallii CAG:12 UP000004504 883109 None 1757 8 1765 Eubacterium infirmum F0142 UP000006873 903814 EUBLK 4476 30 4579 Eubacterium limosum (strain KIST612) UP000018868 1161902 None 1685 5 1691 Eubacterium nodatum ATCC 33099 UP000012589 1235802 None 6130 24 6217 Eubacterium plexicaudatum ASF492 UP000018436 592031 None 946 6 954 Eubacterium saphenum ATCC 49989 UP000014176 1235790 None 3750 23 3778 Eubacterium sp. 14-2 UP000004469 457402 None 2787 22 2873 Eubacterium sp. 3_1_31 UP000018124 1262880 None 2082 10 2092 Eubacterium sp. CAG:156 UP000018318 1262881 None 2183 13 2196 Eubacterium sp. CAG:161 UP000018411 1262882 None 1737 5 1742 Eubacterium sp. CAG:180 UP000017943 1262883 None 1823 7 1830 Eubacterium sp. CAG:192 UP000017996 1262884 None 1810 7 1817 Eubacterium sp. CAG:202 UP000018414 1262886 None 1711 6 1717 Eubacterium sp. CAG:251 UP000017970 1262887 None 2318 20 2338 Eubacterium sp. CAG:252 UP000017904 1262888 None 1988 18 2006 Eubacterium sp. CAG:274 UP000017954 1262889 None 2416 20 2436 Eubacterium sp. CAG:38 UP000017975 1262890 None 1741 5 1746 Eubacterium sp. CAG:581 UP000018312 1262891 None 2272 15 2287 Eubacterium sp. CAG:603 UP000018127 1262893 None 2488 14 2502 Eubacterium sp. CAG:786 UP000017924 1262894 None 1647 2 1650 Eubacterium sp. CAG:841 UP000017940 1262895 None 2170 19 2189 Eubacterium sp. CAG:86 UP000006000 411463 None 2731 45 2797 Eubacterium ventriosum ATCC 27560 UP000030711 71139 EUCGR 36637 7513 44247 Eucalyptus grandis (Flooded gum) UP000011269 1289470 EEVZ 2 0 2 Euprosterna elaeasa virus (isolate Euprosterna elaeasa/-/Zeddam/-) (EvV) UP000008926 453115 EBLV1 5 2 7 European bat lyssavirus 1 (strain Bat/Germany/RV9/1968) (EBLV1) UP000007206 453116 EBLV2 5 3 8 European bat lyssavirus 2 (strain Human/Scotland/RV1333/2002) (EBLV2) UP000009060 10565 PAPVE 15 0 15 European elk papillomavirus (EEPV) UP000006676 267407 EMARV 4 0 4 European mountain ash ringspot-associated virus (isolate Sorbus aucuparia) (EMARAV) UP000030689 72664 EUTSA 26403 1946 28442 Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum) UP000012174 1287681 EUTLA 11683 1 11685 Eutypa lata (strain UCR-EL1) (Grapevine dieback disease fungus) (Eutypa armeniacae) UP000001681 262543 EXIS2 2991 14 3015 Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) UP000000716 360911 EXISA 3005 15 3020 Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) UP000027920 1182545 None 13115 3 13118 Exophiala aquamarina CBS 119918 UP000007304 858893 EXODN 9284 107 9391 Exophiala dermatitidis (strain ATCC 34100 / CBS 525.76 / NIH/UT8656) (Black yeast) (Wangiella dermatitidis) UP000004465 883111 None 1708 9 1718 Facklamia hominis CCUG 36813 UP000005147 883112 None 1616 5 1643 Facklamia ignava CCUG 37419 UP000006190 883113 None 1519 8 1528 Facklamia languida CCUG 37842 UP000006028 748224 None 3307 45 3354 Faecalibacterium cf. prausnitzii KLE1255 UP000004619 411483 None 3430 42 3475 Faecalibacterium prausnitzii A2-165 UP000008804 718252 None 2741 14 2756 Faecalibacterium prausnitzii L2-6 UP000007059 657322 None 2724 20 2746 Faecalibacterium prausnitzii SL3/3 UP000018132 1262896 None 1282 2 1284 Faecalibacterium sp. CAG:1138 UP000018328 1262897 None 2452 12 2464 Faecalibacterium sp. CAG:74 UP000018070 1262898 None 1842 14 1856 Faecalibacterium sp. CAG:82 UP000008801 717960 None 1441 1 1442 Faecalitalea cylindroides T2-87 UP000001098 292349 FCVUR 3 0 3 Feline calicivirus (strain Cat/United States/Urbana/1960) (FCV) UP000000835 33734 FIPV 10 1 11 Feline coronavirus (strain FIPV WSU-79/1146) (FCoV) UP000052094 568209 None 6 0 6 Feline papillomavirus type 2 UP000052108 1416021 None 1 0 1 Feline sakobuvirus A UP000011712 9685 FELCA 19370 1001 20404 Felis catus (Cat) (Felis silvestris catus) UP000029761 1556324 FCDNV 3 0 3 Fenneropenaeus chinensis hepatopancreatic densovirus (isolate Shrimp/China/HB/2008) UP000011244 1283347 FDLV8 8 0 8 Fer-de-Lance paramyxovirus (strain ATCC VR-895) (FLDV) (Fer-de-Lance virus) UP000032417 1562970 None 2388 3 2405 Fermentimonas caenicola UP000032336 1121877 None 2971 3 3003 Ferrimicrobium acidiphilum DSM 19497 UP000006683 550540 FERBD 3755 26 3782 Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) UP000033070 1188319 None 2638 0 2639 Ferriphaselus amnicola UP000002613 589924 FERPA 2451 12 2480 Ferroglobus placidus (strain DSM 10642 / AEDII12DO) UP000018013 261388 None 2636 35 2736 Ferroplasma sp. Type II UP000050960 1356299 None 1953 0 1960 Ferrovum sp. JA12 UP000019681 1403537 None 2783 17 2800 Fervidicella metallireducens AeB UP000007391 1163730 FERFK 1377 7 1385 Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) UP000002415 381764 FERNB 1717 8 1750 Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) UP000011058 1166018 None 5598 29 5627 Fibrella aestuarina BUZ 2 UP000009309 1185876 None 6303 38 6354 Fibrisoma limi BUZ 3 UP000000517 59374 FIBSS 2870 1 2882 Fibrobacter succinogenes (strain ATCC 19169 / S85) UP000006352 599839 None 9249 2 9255 Fibroporia radiculosa UP000016665 59894 FICAL 15249 673 15935 Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis) UP000004080 1196324 None 3813 37 3850 Fictibacillus macauensis ZFHKF-1 UP000052111 882768 None 2 0 2 Fig cryptic virus UP000001677 648172 FDVS 12 0 12 Fiji disease virus (isolate Sugarcane) (FDV) UP000007468 546269 FILAD 1605 11 1633 Filifactor alocis (strain ATCC 35896 / D40 B5) (Fusobacterium alocis) UP000027982 661478 None 4806 11 4820 Fimbriimonas ginsengisoli Gsoil 348 UP000001319 334413 FINM2 1806 7 1813 Finegoldia magna (strain ATCC 29328) (Peptostreptococcus magnus) UP000017395 1378168 None 3463 9 3563 Firmicutes bacterium ASF500 UP000018112 1262998 None 2009 12 2022 Firmicutes bacterium CAG:102 UP000018290 1262999 None 1802 7 1809 Firmicutes bacterium CAG:103 UP000018021 1263000 None 2305 6 2311 Firmicutes bacterium CAG:110 UP000018090 1263001 None 2207 15 2222 Firmicutes bacterium CAG:114 UP000018269 1263002 None 2355 9 2364 Firmicutes bacterium CAG:124 UP000018410 1263003 None 1630 5 1635 Firmicutes bacterium CAG:129 UP000018011 1263004 None 2340 7 2347 Firmicutes bacterium CAG:137 UP000018044 1263005 None 1951 9 1960 Firmicutes bacterium CAG:145 UP000018279 1263006 None 2206 10 2234 Firmicutes bacterium CAG:170 UP000017932 1263007 None 1494 11 1506 Firmicutes bacterium CAG:176 UP000018384 1263008 None 2298 12 2311 Firmicutes bacterium CAG:194 UP000018345 1263009 None 2060 18 2078 Firmicutes bacterium CAG:212 UP000018294 1263010 None 2263 23 2286 Firmicutes bacterium CAG:227 UP000018260 1263011 None 2008 8 2017 Firmicutes bacterium CAG:238 UP000017963 1263012 None 2500 18 2518 Firmicutes bacterium CAG:24 UP000018051 1263013 None 1904 13 1917 Firmicutes bacterium CAG:240 UP000018350 1263014 None 1689 6 1695 Firmicutes bacterium CAG:270 UP000017938 1263015 None 2241 7 2249 Firmicutes bacterium CAG:272 UP000017945 1263016 None 1729 6 1735 Firmicutes bacterium CAG:308 UP000018373 1263017 None 1316 5 1321 Firmicutes bacterium CAG:313 UP000017979 1263018 None 1218 2 1220 Firmicutes bacterium CAG:321 UP000018232 1263020 None 1457 5 1462 Firmicutes bacterium CAG:345 UP000018139 1263021 None 2438 9 2447 Firmicutes bacterium CAG:41 UP000018167 1263022 None 2801 34 2835 Firmicutes bacterium CAG:424 UP000018133 1263023 None 1766 4 1771 Firmicutes bacterium CAG:449 UP000018338 1263025 None 2658 18 2676 Firmicutes bacterium CAG:466 UP000018161 1263026 None 1268 2 1270 Firmicutes bacterium CAG:475 UP000018220 1263027 None 2488 11 2499 Firmicutes bacterium CAG:534 UP000018332 1263028 None 1608 13 1621 Firmicutes bacterium CAG:536 UP000018403 1263029 None 1173 2 1175 Firmicutes bacterium CAG:552 UP000018402 1263030 None 1713 10 1723 Firmicutes bacterium CAG:555 UP000018123 1263031 None 2143 17 2160 Firmicutes bacterium CAG:56 UP000018398 1262997 None 1291 2 1293 Firmicutes bacterium CAG:582 UP000018035 1262996 None 1345 3 1348 Firmicutes bacterium CAG:631 UP000018386 1262995 None 2650 21 2671 Firmicutes bacterium CAG:646 UP000018207 1262994 None 2497 15 2513 Firmicutes bacterium CAG:65 UP000018038 1262993 None 2155 20 2175 Firmicutes bacterium CAG:791 UP000017964 1263032 None 1373 4 1377 Firmicutes bacterium CAG:822 UP000018101 1262992 None 1709 9 1718 Firmicutes bacterium CAG:83 UP000017928 1262991 None 2555 17 2572 Firmicutes bacterium CAG:882 UP000018073 1262990 None 1228 4 1232 Firmicutes bacterium CAG:884 UP000018237 1262989 None 2404 6 2413 Firmicutes bacterium CAG:94 UP000018182 1262988 None 2747 20 2767 Firmicutes bacterium CAG:95 UP000014154 1235796 None 2242 14 2269 Firmicutes bacterium M10-2 UP000004344 741277 None 4504 53 4627 Fischerella sp. JSC-11 UP000050827 1547436 None 3363 11 3385 Flagellimonas sp. DK169 UP000033121 1220578 None 4685 74 4759 Flavihumibacter petaseus NBRC 106054 UP000031408 1349421 None 4193 22 4215 Flavihumibacter solisilvae UP000031400 1463156 None 3287 15 3302 Flavihumibacter sp. ZG627 UP000002172 156586 FLABB 2584 8 2592 Flavobacteria bacterium (strain BBFL7) UP000003644 487796 FLABM 1766 4 1770 Flavobacteria bacterium (strain MS024-2A) UP000003784 391598 None 2574 14 2612 Flavobacteria bacterium BAL38 UP000003631 487797 None 1376 6 1383 Flavobacteria bacterium MS024-3C UP000001512 531844 FLAB3 2531 2 2534 Flavobacteriaceae bacterium (strain 3519-10) UP000033681 1629721 None 2324 2 2330 Flavobacteriales bacterium BRH_c54 UP000037755 1202724 None 3823 10 3841 Flavobacterium akiainvivens UP000029554 1453498 None 2988 7 2996 Flavobacterium aquatile LMG 4008 UP000030129 1406840 None 3255 8 3264 Flavobacterium beibuense F44-8 UP000009186 1034807 FLABF 2844 4 2872 Flavobacterium branchiophilum (strain FL-15) UP000005638 1041826 FLACA 2610 7 2642 Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) UP000030149 1107311 None 2840 8 2848 Flavobacterium enshiense DK69 UP000005566 1086011 None 3583 7 3590 Flavobacterium frigoris PS1 UP000007599 1094466 FLAIG 2646 3 2671 Flavobacterium indicum (strain DSM 17447 / CIP 109464 / GPTSA100-9) UP000006694 376686 FLAJ1 4999 17 5017 Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae) UP000006394 402612 FLAPJ 2417 4 2446 Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) UP000032747 1603293 None 3350 6 3359 Flavobacterium sp. 316 UP000031403 1423323 None 3204 10 3214 Flavobacterium sp. AED UP000028636 1492737 None 3645 8 3661 Flavobacterium sp. EM1308 UP000027064 1492738 None 3221 9 3230 Flavobacterium sp. EM1321 UP000031466 1566023 None 4488 15 4503 Flavobacterium sp. KMS UP000051024 1736351 None 3302 7 3309 Flavobacterium sp. Leaf359 UP000030111 1121898 None 3771 14 3785 Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790 UP000004459 411475 None 4250 28 4278 Flavonifractor plautii ATCC 29863 UP000006054 880071 FLELS 3828 4 3878 Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) UP000006621 717231 FLESM 2170 15 2261 Flexistipes sinusarabici (strain DSM 4947 / MAS 10) UP000007463 755732 FLUTR 4012 4 4033 Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) UP000015241 743788 FOMPI 13804 2 13852 Fomitopsis pinicola (strain FP-58527) (Brown rot fungus) UP000030693 691883 None 5901 343 6244 Fonticula alba UP000000682 649897 FMDVP 1 0 1 Foot-and-mouth disease virus (isolate Swine/Taiwan/OTai/1997 serotype O) (FMDV) UP000016160 1347342 None 3539 18 3570 Formosa agariphila KMM 3901 UP000012024 1137281 None 2831 10 2841 Formosa sp. AK20 UP000001594 10553 ADEG1 38 0 38 Fowl adenovirus A serotype 1 (strain CELO / Phelps) (FAdV-1) (Avian adenovirus gal1 (strain Phelps)) UP000008597 928301 FOWPN 251 0 261 Fowlpox virus (strain NVSL) (FPV) UP000032123 119857 None 1884 28 2715 Francisella tularensis subsp. holarctica UP000001174 177416 FRATT 1524 4 2644 Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4) UP000052082 485362 None 8 0 8 Francolinus leucoscepus papillomavirus 1 UP000000657 326424 FRAAA 6569 141 6710 Frankia alni (strain ACN14a) UP000001937 106370 FRASC 4406 35 4498 Frankia sp. (strain CcI3) UP000001313 298653 FRASN 7074 59 7191 Frankia sp. (strain EAN1pec) UP000002484 298654 FRASU 7027 52 7083 Frankia sp. (strain EuI1c) UP000004777 102897 None 8109 51 8181 Frankia sp. EUN1f UP000001549 656024 FRADG 4017 46 4215 Frankia symbiont subsp. Datisca glomerata UP000005234 767434 FRAAD 3087 11 3101 Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) (Acetobacter aurantius) UP000051919 1736407 None 3643 16 3659 Frateuria sp. Soil773 UP000008957 651822 None 1430 4 1435 Fretibacterium fastidiosum UP000051005 1736282 None 2776 17 2793 Frigoribacterium sp. Leaf164 UP000051720 1736285 None 2844 14 2858 Frigoribacterium sp. Leaf172 UP000037934 1690245 None 2798 17 2815 Frigoribacterium sp. RIT-PI-h UP000008786 654914 FCPVN 6 0 6 Fringilla coelebs papillomavirus (isolate Chaffinch/Netherlands/Dutch) (FcPV) UP000030901 1267021 None 2260 10 2272 Frischella perrara UP000009247 114102 ADEF1 23 0 23 Frog adenovirus 1 (strain ATCC VR-896) (FrAdV-1) UP000008770 654924 FRG3G 98 0 98 Frog virus 3 (isolate Goorha) (FV-3) UP000051456 1736329 None 3018 21 3039 Frondihabitans sp. Leaf304 UP000051944 930946 None 1436 10 1449 Fructobacillus fructosus KCTC 3544 UP000036087 1658766 None 1624 0 1629 Fructobacillus sp. EFB-N1 UP000028990 885580 FUKDA 20402 3 20440 Fukomys damarensis (Damaraland mole rat) (Cryptomys damarensis) UP000004310 314231 None 3725 14 3754 Fulvimarina pelagi HTCC2506 UP000011135 1237149 None 5934 18 5958 Fulvivirga imtechensis AK7 UP000029758 1554495 FNSVC 5 0 5 Furcraea necrotic streak virus (isolate/Colombia/Furcraea/Cauca/2004) UP000037904 179993 None 11938 1 11940 Fusarium langsethiae UP000002489 660025 FUSOF 17781 3 17785 Fusarium oxysporum (strain Fo5176) (Fusarium vascular wilt) UP000016928 1229664 FUSC1 15352 3 15438 Fusarium oxysporum f. sp. cubense (strain race 1) (Panama disease fungus) UP000016929 1229665 FUSC4 14152 5 14459 Fusarium oxysporum f. sp. cubense (strain race 4) (Panama disease fungus) UP000030685 1089451 None 16627 3180 19810 Fusarium oxysporum f. sp. cubense tropical race 4 54006 UP000009097 426428 FUSO4 20850 10322 33143 Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936) (Fusarium vascular wilt of tomato) UP000030663 1089458 None 19281 3473 22772 Fusarium oxysporum f. sp. raphani 54005 UP000007978 1028729 FUSPC 12445 1 12447 Fusarium pseudograminearum (strain CS3096) (Wheat and barley crown-rot fungus) UP000002975 469605 None 1863 27 1890 Fusobacterium gonidiaformans 3-1-5R UP000003415 469616 None 2476 56 2538 Fusobacterium mortiferum ATCC 9817 UP000003092 742814 None 3191 5 3197 Fusobacterium necrophorum subsp. funduliforme 1_1_36S UP000005392 997347 None 2766 11 2777 Fusobacterium nucleatum subsp. animalis ATCC 51191 UP000002521 190304 FUSNN 2043 3 2064 Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) UP000018397 1262899 None 2304 7 2311 Fusobacterium sp. CAG:439 UP000004505 469618 None 2900 107 3008 Fusobacterium varium ATCC 27725 UP000006039 644352 GAGT3 14188 140 14329 Gaeumannomyces graminis var. tritici (strain R3-111a-1) (Wheat and barley take-all root rot fungus) UP000007364 555500 None 3086 13 3099 Galbibacter marinus UP000030680 130081 GALSU 6602 433 7054 Galdieria sulphuraria (Red alga) UP000027222 685588 None 21351 6 21391 Galerina marginata CBS 339.88 UP000029766 60714 GAMV 5 0 5 Galinsoga mosaic virus (GaMV) UP000006755 745411 None 3774 24 3798 Gallaecimonas xiamenensis 3-C-1 UP000006908 1005058 GALAU 2476 6 2500 Gallibacterium anatis (strain UMN179) (Pasteurella anatis) UP000008072 10389 GAHVM 90 1 91 Gallid herpesvirus 2 (strain Chicken/Md5/ATCC VR-987) (GaHV-2) (Marek's disease herpesvirus type 1) UP000029763 717641 CHPV1 4 0 4 Galliform aveparvovirus 1 (isolate Chicken/Hungary/ABU-P1/-/-) (ChPV) UP000001235 395494 GALCS 2836 17 2894 Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea capsiferriformans (strain ES-2)) UP000029751 1560035 GALIV 1 0 1 Gallivirus A (isolate Turkey/Hungary/M176/2011) UP000000539 9031 CHICK 15775 2163 18021 Gallus gallus (Chicken) UP000033581 1629722 None 2944 15 2967 Gammaproteobacteria bacterium BRH_c0 UP000028732 1492922 None 3282 25 3324 Gammaproteobacteria bacterium MFB021 UP000037600 1513271 None 3455 15 3471 Gammaproteobacteria bacterium Q1 UP000051175 1703402 None 3345 14 3359 Gammaproteobacteria bacterium SG8_11 UP000051321 1703405 None 4590 455 5046 Gammaproteobacteria bacterium SG8_31 UP000001453 525284 GARV3 1352 13 1365 Gardnerella vaginalis (strain ATCC 14019 / 317) UP000014572 1261070 None 1427 4 1431 Gardnerella vaginalis JCP8481B UP000007635 69293 GASAC 20648 6601 27387 Gasterosteus aculeatus (Three-spined stickleback) UP000010383 1173025 None 3778 35 3815 Geitlerinema sp. PCC 7407 UP000006004 546270 None 1682 27 1710 Gemella haemolysans ATCC 10379 UP000002209 379066 GEMAT 3864 68 3935 Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) UP000051607 1703355 None 3067 33 3100 Gemmatimonas sp. SG8_17 UP000051174 1703356 None 2610 24 2634 Gemmatimonas sp. SG8_23 UP000051120 1703357 None 3047 34 3081 Gemmatimonas sp. SG8_28 UP000051763 1703358 None 2355 22 2377 Gemmatimonas sp. SG8_38_2 UP000051975 1703359 None 3274 50 3324 Gemmatimonas sp. SM23_52 UP000019151 861299 None 6238 23 6369 Gemmatirosa kalamazoonesis UP000015453 192259 None 17673 2 17685 Genlisea aurea UP000035068 1121915 None 2894 34 2928 Geoalkalibacter ferrihydriticus DSM 17813 UP000035036 483547 None 2957 30 3033 Geoalkalibacter subterraneus UP000001172 235909 GEOKA 3507 9 3539 Geobacillus kaustophilus (strain HTA426) UP000002386 471223 GEOSW 3027 21 3168 Geobacillus sp. (strain WCH70) UP000002381 481743 GEOS4 6183 54 6238 Geobacillus sp. (strain Y412MC10) UP000037948 1547578 None 4649 0 4649 Geobacillus sp. BCO2 UP000029104 1482738 None 1691 11 1703 Geobacillus sp. CAMR12739 UP000008825 404380 GEOBB 4032 10 4051 Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) UP000007721 316067 GEODF 3752 46 3799 Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) UP000002420 398767 GEOLS 3604 40 3685 Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) UP000007073 269799 GEOMG 3484 18 3568 Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) UP000030972 1266765 None 3617 536 4154 Geobacter sp. OR-1 UP000000577 243231 GEOSL 3395 7 3433 Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) UP000006695 351605 GEOUR 4204 51 4357 Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens) UP000001382 526225 GEOOG 4754 41 4811 Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) UP000051830 1736354 None 4066 27 4093 Geodermatophilus sp. Leaf369 UP000032900 1236989 None 4403 8 4411 Geofilum rubicundum JCM 15548 UP000034723 113653 None 1961 12 1973 Geoglobus ahangari UP000027014 1460635 None 4057 29 4086 Geomicrobium sp. JCM 19038 UP000027177 1460636 None 4340 21 4361 Geomicrobium sp. JCM 19039 UP000027879 1497974 None 2683 18 2721 Georgenia sp. SUBG003 UP000018040 5741 GIAIN 6085 0 6114 Giardia intestinalis (Giardia lamblia) UP000001548 184922 GIAIC 7154 0 7364 Giardia intestinalis (strain ATCC 50803 / WB clone C6) (Giardia lamblia) UP000000350 649893 GLVWB 2 0 2 Giardia lamblia virus (isolate Wang) (GLV) UP000016800 1279085 GIBF5 14787 5 14810 Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) (Bakanae and foot rot disease fungus) (Fusarium fujikuroi) UP000009096 334819 GIBM7 15602 1986 17589 Gibberella moniliformis (strain M3125 / FGSC 7600) (Maize ear and stalk rot fungus) (Fusarium verticillioides) UP000009057 229533 GIBZE 17345 543 27531 Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (Wheat head blight fungus) (Fusarium graminearum) UP000000402 649894 GAVAU 5 0 5 Gill-associated virus (isolate Giant tiger prawn/Australia) (GAV) UP000019656 1196095 None 2770 14 2836 Gilliamella apicola UP000028393 1445513 None 1963 4 2061 Gilliamella apicola SCGC AB-598-B02 UP000028405 1445514 None 2305 7 2377 Gilliamella apicola SCGC AB-598-I20 UP000028428 1445512 None 1523 1 1611 Gilliamella apicola SCGC AB-598-P17 UP000003844 865937 None 3392 19 3434 Gillisia limnaea DSM 15749 UP000003087 344747 None 6425 38 6480 Gimesia maris DSM 8797 UP000009282 1085623 GLANF 3505 148 3654 Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064) UP000016922 1116229 GLAL2 13080 2 13083 Glarea lozoyensis (strain ATCC 20868 / MF5171) UP000005446 1104152 GLAL7 7926 0 7926 Glarea lozoyensis (strain ATCC 74030 / MF5533) UP000017396 1183438 None 4065 397 4507 Gloeobacter kilaueensis JS1 UP000000557 251221 GLOVI 4318 88 4427 Gloeobacter violaceus (strain PCC 7421) UP000011180 102232 None 4022 40 4087 Gloeocapsa sp. PCC 73106 UP000010476 1173026 None 4960 43 5011 Gloeocapsa sp. PCC 7428 UP000030669 670483 GLOTA 11734 1 11755 Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) (Brown rot fungus) UP000011301 379529 GHVS 160 0 191 Glossina hytrovirus (isolate Glossina pallidipes/Ethiopia/Seibersdorf/-) (GHV) UP000001176 272568 GLUDA 3556 227 5249 Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) UP000005513 1004836 None 4694 53 4895 Gluconacetobacter sp. SXCC-1 UP000006375 290633 GLUOX 2619 7 2660 Gluconobacter oxydans (strain 621H) (Gluconobacter suboxydans) UP000000223 1224746 None 3676 20 3732 Gluconobacter oxydans H24 UP000008827 3847 SOYBN 54273 11864 66541 Glycine max (Soybean) (Glycine hispida) UP000052113 1223562 None 4 0 4 Golden Gate virus UP000006023 1075090 None 4468 223 4691 Gordonia amarae NBRC 15530 UP000035088 1073574 None 3637 159 3796 Gordonia araii NBRC 100433 UP000001219 526226 GORB4 4597 31 4696 Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667) (Rhodococcus bronchialis) UP000035034 1077974 None 4210 209 4420 Gordonia effusa NBRC 100432 UP000035009 1223542 None 4136 133 4271 Gordonia malaquae NBRC 108250 UP000009154 1112204 GORPV 5079 18 5110 Gordonia polyisoprenivorans (strain DSM 44266 / VH2) UP000008363 1108045 None 5690 240 5930 Gordonia rhizosphera NBRC 16068 UP000035083 1223544 None 3772 131 3904 Gordonia sihwensis NBRC 108236 UP000011666 1223545 None 4747 160 4907 Gordonia soli NBRC 108243 UP000003281 337191 None 5132 29 5175 Gordonia sp. KTR9 UP000011989 1241906 None 4236 27 4279 Gordonia sp. NB4-1Y UP000005845 1089453 None 4404 183 4592 Gordonia sputi NBRC 100414 UP000008805 657308 None 2021 6 2027 Gordonibacter pamelaeae 7-10-1-b UP000001519 9595 GORGO 20817 6481 27478 Gorilla gorilla gorilla (Western lowland gorilla) UP000032142 29729 GOSAR 30408 1023 33312 Gossypium arboreum (Tree cotton) (Gossypium nanking) UP000032304 29730 GOSRA 38001 28533 66679 Gossypium raimondii (New World cotton) UP000019102 1298598 None 4439 11 4450 Gracilibacillus boraciitolerans JCM 21714 UP000012283 1308866 None 2952 16 2968 Gracilibacillus halophilus YIM-C55.5 UP000000755 411154 GRAFK 3461 93 3584 Gramella forsetii (strain KT0803) UP000001963 391165 GRABC 2424 6 2432 Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) UP000005926 638301 None 1891 29 1920 Granulicatella adiacens ATCC 49175 UP000002939 626369 None 1555 7 1562 Granulicatella elegans ATCC 700633 UP000007113 682795 GRAMM 4782 22 4815 Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) UP000000343 1198114 GRATM 4492 22 4542 Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9) UP000000399 652668 GFKVM 4 0 4 Grapevine fleck virus (isolate Italy/MT48) (GFkV) UP000006707 651354 GLRV3 13 0 13 Grapevine leafroll-associated virus 3 (isolate United States/NY1) (GLRaV-3) (Grapevine leafroll-associated closterovirus (isolate 109)) UP000029756 1554493 GLRV7 10 0 10 Grapevine leafroll-associated virus 7 (isolate Grapevine/Albania/AA42/-) UP000000679 651358 GVAIS 5 0 5 Grapevine virus A (isolate Is 151) (GVA) UP000019763 110365 GRENI 6341 0 6375 Gregarina niphandrodes (Septate eugregarine) UP000033732 1581149 None 4706 40 4747 Grimontia sp. AD028 UP000007796 655863 GROCL 8310 1 8312 Grosmannia clavigera (strain kw1407 / UAMH 11150) (Blue stain fungus) (Graphiocladiella clavigera) UP000008927 1005060 GRVMC 4 1 5 Groundnut rosette virus (strain MC1) (GRV) UP000011087 905079 None 24562 28 24821 Guillardia theta CCMP2712 UP000032266 1445510 None 5890 23 5934 Gynuella sunshinyii YC6258 UP000028826 195105 None 3781 25 3806 Haematobacter massiliensis UP000025227 6289 HAECO 21175 26 21870 Haemonchus contortus (Barber pole worm) UP000038042 6290 HAEPC 19312 17 19329 Haemonchus placei (Barber's pole worm) UP000001022 233412 HAEDU 1693 1 1713 Haemophilus ducreyi (strain 35000HP / ATCC 700724) UP000000579 71421 HAEIN 1707 2 1725 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) UP000006743 557723 HAEPS 1907 95 2031 Haemophilus parasuis serovar 5 (strain SH0165) UP000001713 1289570 BPHC1 41 0 41 Haemophilus phage HP1 (strain HP1c1) (Bacteriophage HP1) UP000006235 1035188 None 2387 3 2390 Haemophilus pittmaniae HK 85 UP000006974 1078483 None 1984 1 1987 Haemophilus sputorum HK 2154 UP000029986 1453496 None 4020 39 4063 Hafnia alvei FB1 UP000000238 349521 HAHCH 6731 20 6773 Hahella chejuensis (strain KCTC 2396) UP000000390 795797 HALJB 3756 23 7242 Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) UP000007434 656519 HALHG 2234 16 2295 Halanaerobium hydrogeniformans (Halanaerobium sp. (strain sapolanicus)) UP000006866 572479 HALPG 2043 12 2068 Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) UP000001880 502025 HALO1 6654 30 6719 Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) UP000008461 760192 HALH1 6675 29 6752 Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) UP000001469 326574 None 56 0 56 Haloarcula hispanica virus SH1 UP000001169 272569 HALMA 4101 133 4243 Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui) UP000007397 866895 HALH3 4087 13 4118 Halobacillus halophilus (strain ATCC 35676 / DSM 2266 / JCM 20832 / NBRC 102448/ NCIMB 2269) (Sporosarcina halophila) UP000028868 195088 None 3956 3 3994 Halobacillus karajensis UP000010769 1246484 None 3900 35 3935 Halobacillus sp. BAB-2008 UP000030879 1543706 None 4082 37 4119 Halobacillus sp. BBL2006 UP000008963 862908 HALMS 3200 30 3231 Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) (Bacteriovorax marinus) UP000000554 64091 HALSA 2415 11 2607 Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) (Halobacterium halobium) UP000004595 751944 None 3243 22 3280 Halobacterium sp. DL1 UP000010880 748449 HALHC 2428 24 2468 Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) UP000008243 309800 HALVD 3983 4 7085 Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) (Halobacterium volcanii) UP000006663 469382 HALBP 3865 29 7233 Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) UP000050535 699431 None 3459 5 3485 Halolamina pelagica UP000001746 485914 HALMD 3321 22 3349 Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) (Haloarcula mukohataei) UP000014463 1121939 None 4665 40 4723 Halomonas anticariensis FP35 = DSM 16096 UP000027249 213554 None 3521 29 3552 Halomonas campaniensis UP000008707 768066 HALED 3359 110 3472 Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) UP000019113 1178482 None 4175 34 4215 Halomonas huangheensis UP000001179 1283337 BPHA1 46 0 46 Halomonas phage phiHAP-1 (isolate -/Gulf of Mexico/-/2001) (Bacteriophage phiHAP-1) UP000018258 1346287 None 5050 229 5290 Halomonas sp. A3H3 UP000019279 1403540 None 6116 119 6277 Halomonas sp. BC04 UP000050569 1479235 None 3241 7 3249 Halomonas sp. HL-48 UP000017115 1397528 None 3393 24 3418 Halomonas sp. PBN3 UP000033642 579478 None 3994 27 4022 Halomonas sp. S2151 UP000028629 1485007 None 2013 10 2029 Halomonas sp. SUBG004 UP000011651 1204738 None 2848 26 2874 Halomonas titanicae BH1 UP000006794 797210 HALXS 4191 30 4221 Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) UP000005707 1033810 None 2994 25 3035 Haloplasma contractile SSD-17B UP000001975 362976 HALWD 2550 1 2551 Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) UP000015381 1033806 None 2957 31 5136 Halorhabdus tiamatea SARL4B UP000019442 1354791 None 2939 25 2984 Halorhodospira halochloris str. A UP000000647 349124 HALHL 2394 12 2407 Halorhodospira halophila (strain DSM 244 / SL1) (Ectothiorhodospira halophila (strain DSM 244 / SL1)) UP000000740 416348 HALLT 3465 30 3560 Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) UP000019024 797299 None 4058 28 4171 Halostagnicola larsenii XH-48 UP000001903 543526 HALTV 5070 43 5113 Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) (Halococcus turkmenicus) UP000010481 65093 HALP7 3666 35 3708 Halothece sp. (strain PCC 7418) (Synechococcus sp. (strain PCC 7418)) UP000000719 373903 HALOH 2306 18 2342 Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) UP000009102 555778 HALNC 2347 6 2357 Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus neapolitanus) UP000010846 797302 HALRX 3076 23 3099 Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) UP000002334 572265 HAMD5 2035 10 2155 Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) UP000027470 99158 HAMHA 8002 1 8004 Hammondia hammondi (Parasitic protozoan) UP000032760 1246595 None 3010 0 3043 Hanseniaspora uvarum DSM 2768 UP000008627 11602 HANTV 3 0 3 Hantaan virus (strain 76-118) (Korean hemorrhagic fever virus) UP000008237 610380 HARSA 15023 6 15127 Harpegnathos saltator (Jerdon's jumping ant) UP000031549 1304833 None 9773 364 10181 Hassallia byssoidea VB512170 UP000004191 883114 None 1863 13 1882 Helcococcus kunzii ATCC 51366 UP000029920 135569 None 2211 6 2234 Helicobacter apodemus UP000029857 37372 None 1967 2 2038 Helicobacter bilis UP000008387 1002804 HELBC 1957 2 1971 Helicobacter bizzozeronii (strain CIII-1) UP000004083 1002805 None 2509 3 2512 Helicobacter bizzozeronii CCUG 35545 UP000007032 537970 None 1501 34 1535 Helicobacter canadensis MIT 98-5491 UP000018688 1357399 None 1797 3 1800 Helicobacter canis NCTC 12740 UP000006036 537971 None 2296 19 2322 Helicobacter cinaedi CCUG 18818 = ATCC BAA-847 UP000007934 936155 HELFC 1646 3 1649 Helicobacter felis (strain ATCC 49179 / NCTC 12436 / CS1) UP000018143 1325130 None 2443 3 2467 Helicobacter fennelliae MRY12-0050 UP000002495 235279 HELHP 1870 2 1875 Helicobacter hepaticus (strain ATCC 51449 / 3B1) UP000018731 1357400 None 1943 3 1946 Helicobacter macacae MIT 99-5501 UP000029922 216 None 1609 3 1721 Helicobacter muridarum UP000001522 679897 HELM1 1396 4 1400 Helicobacter mustelae (strain ATCC 43772 / LMG 18044 / NCTC 12198 / 12198) (Campylobacter mustelae) UP000000429 85962 HELPY 1553 0 1577 Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori) UP000029714 1548018 None 1954 2 2091 Helicobacter sanguini UP000029872 1548149 None 1702 4 1789 Helicobacter sp. MIT 05-5293 UP000029926 1548150 None 4615 100 4716 Helicobacter sp. MIT 05-5294 UP000029733 1548152 None 1664 2 1666 Helicobacter sp. MIT 09-6949 UP000004660 556267 None 1628 11 1639 Helicobacter winghamensis ATCC BAA-430 UP000026042 1291522 None 6029 0 6031 Helicosporidium sp. ATCC 50920 UP000006711 37206 HASV 3 0 3 Helicoverpa armigera stunt virus (HaSV) UP000029779 1128424 HZNV2 113 0 113 Helicoverpa zea nudivirus 2 (HzNV-2) UP000008550 498761 HELMI 2807 115 2999 Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) UP000000352 45237 HV19S 2 0 2 Helminthosporium victoriae virus-190S (Hv190SV) UP000015101 6412 HELRO 23308 20 23433 Helobdella robusta (Californian leech) UP000008771 928303 HENDH 9 0 9 Hendra virus (isolate Horse/Autralia/Hendra/1994) UP000008591 928302 HBVCJ 5 2 7 Hepatitis B virus genotype C subtype ayr (isolate Human/Japan/Okamoto/-) (HBV-C) UP000000518 11108 HCVH 2 0 2 Hepatitis C virus genotype 1a (isolate H) (HCV) UP000006705 652674 HEVCH 3 0 3 Hepatitis E virus genotype 1 (isolate Human/China/HeBei/1987) (HEV) UP000006675 31762 HDVD3 2 0 2 Hepatitis delta virus genotype I (isolate D380) (HDV) UP000000329 757424 HERSS 4269 463 4735 Herbaspirillum seropedicae (strain SmR1) UP000007296 1144319 None 4937 36 4974 Herbaspirillum sp. CF444 UP000031572 709839 None 4061 41 4430 Herbaspirillum sp. TSA66 UP000007507 1144342 None 4587 25 4612 Herbaspirillum sp. YR522 UP000006697 204773 HERAR 3256 16 3283 Herminiimonas arsenicoxydans UP000000787 316274 HERA2 5229 25 5278 Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) UP000030671 747525 None 13147 12 13275 Heterobasidion irregulare TC 32-1 UP000011263 1289474 HCRNA 2 0 2 Heterocapsa circularisquama RNA virus 01 (strain 34) (HcRNAV01) UP000006813 10181 HETGA 21430 19 21488 Heterocephalus glaber (Naked mole rat) UP000000403 239720 HARNA 1 0 1 Heterosigma akashiwo RNA virus (strain SOG263) (HaRNAV) UP000029760 1554497 HGSV2 8 0 8 Hibiscus green spot virus (isolate Citrus volkameriana /USA/WAI 1-1/2009) UP000008139 760142 HIPMA 1646 7 1677 Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) UP000002745 582402 HIRBI 3174 13 3187 Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) UP000007024 654912 HIS1I 35 0 35 His1 virus (isolate Australia/Victoria) (His1V) (Haloarcula hispanica virus 1) UP000008543 228400 HISS2 1970 1 1980 Histophilus somni (strain 2336) (Haemophilus somnus) UP000002741 573234 HODCD 169 0 169 Hodgkinia cicadicola (strain Dsem) UP000004291 411684 HOEPD 4163 22 4220 Hoeflea phototrophica (strain DSM 17068 / NCIMB 14078 / DFL-43) UP000029706 1547437 None 4632 30 4667 Hoeflea sp. BAL378 UP000050680 1629712 None 3638 15 3670 Hoeflea sp. BRH_c9 UP000050665 1620421 None 4715 24 4811 Hoeflea sp. IMCC20628 UP000004315 518637 None 2487 41 2529 Holdemanella biformis DSM 3989 UP000005950 545696 None 4171 50 4223 Holdemania filiformis DSM 12042 UP000019112 1399147 None 1116 0 1117 Holospora obtusa F1 UP000026922 1321371 None 1184 0 1224 Holospora undulata HU1 UP000005640 9606 HUMAN 21006 71173 92635 Homo sapiens (Human) UP000011116 112509 HORVD 24215 28182 52416 Hordeum vulgare var. distichum (Domesticated barley) UP000000354 227859 CVHSA 15 0 15 Human SARS coronavirus (SARS-CoV) (Severe acute respiratory syndrome coronavirus) UP000001061 11927 HTL1C 9 4 13 Human T-cell leukemia virus 1 (isolate Caribbea HS-35 subtype A) (HTLV-1) UP000009254 11909 HTLV2 6 0 6 Human T-cell leukemia virus 2 (HTLV-2) UP000008029 402036 HTL32 6 0 6 Human T-cell leukemia virus 3 (strain 2026ND) (HTLV-3) UP000008167 10515 ADE02 45 2 47 Human adenovirus C serotype 2 (HAdV-2) (Human adenovirus 2) UP000001650 12456 HASV1 3 0 3 Human astrovirus-1 (HAstV-1) UP000006716 11137 CVH22 8 0 8 Human coronavirus 229E (HCoV-229E) UP000000938 295027 HCMVM 168 12 180 Human cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5) UP000006724 12098 HAVHM 1 0 1 Human hepatitis A virus genotype IB (isolate HM175) (HHAV) (Human hepatitis A virus (isolate Human/Australia/HM175/1976)) UP000009294 10299 HHV11 73 4 78 Human herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex virus 1) UP000001874 10315 HHV2H 73 2 75 Human herpesvirus 2 (strain HG52) (HHV-2) (Human herpes simplex virus 2) UP000009295 10370 HHV6U 103 5 119 Human herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B lymphotropic virus) UP000006930 36351 HHV6Z 97 1 101 Human herpesvirus 6B (strain Z29) (HHV-6 variant B) (Human B lymphotropic virus) UP000000942 868565 HHV8P 85 1 86 Human herpesvirus 8 type P (isolate GK18) (HHV-8) (Kaposi's sarcoma-associated herpesvirus) UP000002241 11706 HV1H2 9 1 10 Human immunodeficiency virus type 1 group M subtype B (isolate HXB2) (HIV-1) UP000002242 11714 HV2BE 9 1 10 Human immunodeficiency virus type 2 subtype A (isolate BEN) (HIV-2) UP000001398 694067 HMPVC 9 0 9 Human metapneumovirus (strain CAN97-83) (HMPV) UP000008222 10580 HPV11 9 0 9 Human papillomavirus type 11 UP000009251 333760 HPV16 8 0 8 Human papillomavirus type 16 UP000006372 10583 HPV1A 8 0 8 Human papillomavirus type 1a UP000009253 10617 HPV04 7 0 7 Human papillomavirus type 4 UP000006367 10589 HPV41 11 0 11 Human papillomavirus type 41 UP000009252 333923 HPV05 8 0 8 Human papillomavirus type 5 UP000000670 122962 HPE2W 1 0 1 Human parechovirus 2 (strain Williamson) (HPeV-2) (Echovirus 23) UP000006624 648237 PAVHV 5 1 6 Human parvovirus B19 (strain HV) (HPV B19) UP000007252 647332 HPBVH 3 0 3 Human picobirnavirus (strain Human/Thailand/Hy005102/-) (PBV) UP000002472 79692 HRSVB 11 1 12 Human respiratory syncytial virus B (strain B1) UP000007070 650130 HRV8A 1 0 1 Human rhinovirus A serotype 89 (strain 41467-Gallo) (HRV-89) UP000004968 566550 None 7452 119 7572 Hungatella hathewayi DSM 13479 UP000005384 742737 None 5127 39 5183 Hungatella hathewayi WAL-18680 UP000029750 1168173 HUNVO 1 0 1 Hunnivirus A (isolate Sheep/Hungary/OHUV1/2009) (HuV-A2) (Ovine hungarovirus OHUV1) UP000028725 394096 None 8908 59 9109 Hyalangium minutum UP000011713 559515 HYAAE 13836 0 14320 Hyaloperonospora arabidopsidis (strain Emoy2) (Downy mildew agent) (Peronospora arabidopsidis) UP000046396 6205 HYDTA 10881 16 10897 Hydatigena taeniaeformis (Feline tapeworm) (Taenia taeniaeformis) UP000003704 1172194 None 4457 17 4685 Hydrocarboniphaga effusa AP103 UP000005981 392423 None 3644 161 3808 Hydrogenivirga sp. 128-5-R1-1 UP000002574 608538 HYDTT 1892 0 1904 Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) UP000001872 380749 HYDS0 1615 11 1629 Hydrogenobaculum sp. (strain Y04AAS1) UP000005985 795665 None 4940 24 4964 Hydrogenophaga sp. PBC UP000050889 1736490 None 4825 34 4859 Hydrogenophaga sp. Root209 UP000019362 1437444 None 4865 1 4866 Hydrogenophaga sp. T4 UP000027341 28885 HYDMR 2319 11 2330 Hydrogenovibrio marinus UP000016368 887062 None 3327 15 3342 Hylemonella gracilis ATCC 19624 UP000030789 1385664 None 3145 8 3153 Hymenobacter sp. DG25B UP000019423 1227739 None 4599 13 4616 Hymenobacter swuensis DY53 UP000046397 6216 HYMDI 9521 14 9535 Hymenolepis diminuta (Rat tapeworm) UP000017242 85433 HYMMI 11982 18 12093 Hymenolepis microstoma (Rodent tapeworm) (Rodentolepis microstoma) UP000046398 102285 HYMNN 12624 13 12637 Hymenolepis nana (Dwarf tapeworm) (Rodentolepis nana) UP000002593 415426 HYPBU 1591 11 1602 Hyperthermus butylicus (strain DSM 5456 / JCM 9403 / PLM1-5) UP000005952 670307 None 3810 22 3842 Hyphomicrobium denitrificans 1NES1 UP000018542 1029756 None 3313 17 3331 Hyphomicrobium nitrativorans NL23 UP000000494 717785 HYPSM 4774 115 4893 Hyphomicrobium sp. (strain MC1) UP000033495 1629720 None 3289 14 3317 Hyphomonadaceae bacterium BRH_c29 UP000001959 228405 HYPNA 3487 12 3505 Hyphomonas neptunium (strain ATCC 15444) UP000033765 1629710 None 3513 19 3624 Hyphomonas sp. BRH_c22 UP000027006 1280941 None 3289 12 3301 Hyphomonas sp. T16B2 UP000005426 452589 HYPAI 11767 48 11816 Hypocrea atroviridis (strain ATCC 20476 / IMI 206040) (Trichoderma atroviride) UP000008984 431241 HYPJQ 9112 2 9115 Hypocrea jecorina (strain QM6a) (Trichoderma reesei) UP000007115 413071 HYPVG 12381 8 12406 Hypocrea virens (strain Gv29-8 / FGSC 10586) (Gliocladium virens) (Trichoderma virens) UP000008983 857967 ICHMG 8049 0 8056 Ichthyophthirius multifiliis (strain G5) (White spot disease agent) (Ich) UP000007643 766178 ICHVA 76 0 76 Ictalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) UP000005215 43179 ICTTR 18752 1214 20012 Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus) UP000037660 1547922 None 5488 39 5527 Ideonella sp. 201-F6 UP000016543 314276 None 2593 8 2608 Idiomarina baltica OS145 UP000001171 283942 IDILO 2600 8 2627 Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) UP000014115 740709 None 2663 10 2673 Idiomarina xiamenensis 10-D-4 UP000007394 945713 IGNAJ 3073 96 3195 Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) UP000000262 453591 IGNH4 1427 7 1434 Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) UP000001304 583356 IGNAA 1920 9 1930 Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) UP000011863 1313172 None 4183 107 4291 Ilumatobacter coccineus YM16-304 UP000006875 572544 ILYPC 2837 22 2880 Ilyobacter polytropus (strain DSM 2926 / CuHBu1) UP000005938 946077 None 2688 6 2694 Imtechella halotolerans K1 UP000000394 651357 ICRSV 6 0 6 Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996) (ICRSV) UP000006073 1189612 None 4637 13 4656 Indibacter alkaliphilus LW1 UP000000681 649896 IFVS 1 0 1 Infectious flacherie virus (isolate Silkworm) (IFV) (Bombyx mori infectious flacherie virus) UP000007212 429314 IHNVW 6 0 6 Infectious hematopoietic necrosis virus (strain WRAC) (IHNV) UP000029762 1513224 IHHNV 3 0 3 Infectious hypodermal and hematopoietic necrosis virus (IHHNV) (Decapod penstyldensovirus 1) UP000007248 11003 IPNVJ 3 0 3 Infectious pancreatic necrosis virus (strain Jasper) (IPNV) UP000008772 652965 ISAV8 10 0 10 Infectious salmon anemia virus (isolate Atlantic salmon/Norway/810/9/99) (ISAV) UP000008773 654923 ISKNN 125 0 125 Infectious spleen and kidney necrosis virus (isolate Mandarin fish/China/Nanhai/1998) (ISKNV) UP000006679 93838 I96A0 12 0 12 Influenza A virus (strain A/Goose/Guangdong/1/1996 H5N1 genotype Gs/Gd) UP000009255 211044 I34A1 12 0 12 Influenza A virus (strain A/Puerto Rico/8/1934 H1N1) UP000008158 518987 INBLE 11 0 11 Influenza B virus (strain B/Lee/1940) UP000008286 11553 INCAA 8 1 9 Influenza C virus (strain C/Ann Arbor/1/1950) UP000029995 1398085 None 6159 69 6229 Inquilinus limosus MP06 UP000008914 710696 INTC7 3524 27 3563 Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) UP000019494 584657 None 4329 34 4366 Intrasporangium chromatireducens Q5-1 UP000019489 1386089 None 4059 27 4086 Intrasporangium oryzae NRRL B-24470 UP000001358 345201 IIV3 126 0 126 Invertebrate iridescent virus 3 (IIV-3) (Mosquito iridescent virus) UP000001359 176652 IIV6 464 4 468 Invertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus) UP000009236 743718 ISOV2 2859 20 2881 Isoptericola variabilis (strain 225) UP000008631 575540 ISOPI 3707 14 3722 Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) UP000001555 6945 IXOSC 20463 10 20884 Ixodes scapularis (Black-legged tick) (Deer tick) UP000027265 933084 None 16338 3 16375 Jaapia argillacea MUCL 33604 UP000004474 1210046 None 3053 17 3070 Janibacter hoylei PVAS-1 UP000005063 313589 None 4045 36 4100 Janibacter sp. HTCC2649 UP000051572 1736393 None 3339 21 3360 Janibacter sp. Soil728 UP000032232 935700 None 4049 0 4051 Jannaschia aquimarina UP000049222 420998 None 3478 2 3482 Jannaschia donghaensis UP000048908 282197 None 3629 0 3631 Jannaschia rubra UP000049455 313367 None 3709 1 3813 Jannaschia seosinensis UP000008326 290400 JANSC 4258 13 4283 Jannaschia sp. (strain CCS1) UP000027604 1349767 None 5338 150 5492 Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 UP000011616 1198452 None 5897 77 5976 Janthinobacterium sp. HH01 UP000034315 1649647 None 5383 1 5386 Janthinobacterium sp. KBS0711 UP000027138 180498 JATCU 27043 15 27172 Jatropha curcas (Barbados nut) UP000030184 504487 None 3310 16 5393 Jejuia pallidilutea UP000031972 220754 None 3706 23 3729 Jeotgalibacillus campisalis UP000031938 889306 None 3913 25 3938 Jeotgalibacillus soli Cunha et al. 2012 UP000031449 1508404 None 4400 26 4444 Jeotgalibacillus sp. D5 UP000044136 1461582 None 2181 0 2181 Jeotgalicoccus sp. 13MG44_air UP000003011 679200 None 2275 9 2308 Johnsonella ignava ATCC 51276 UP000000628 471856 JONDD 2482 13 2511 Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) (Listeria denitrificans) UP000003806 885272 None 1504 4 1509 Jonquetella anthropi DSM 22815 UP000004690 926559 None 3768 15 3858 Joostella marina DSM 19592 UP000008294 648250 JDNVP 4 3 7 Junonia coenia densovirus (isolate pBRJ/1990) (JcDNV) UP000019377 1365824 KALBG 5765 0 5765 Kalmanozyma brasiliensis (strain GHG001) (Yeast) (Pseudozyma brasiliensis) UP000051841 1410657 None 2031 12 2043 Kandleria vitulina DSM 20405 UP000034071 914150 None 2206 1 2208 Kangiella geojedonensis UP000005220 1071382 KAZAF 5354 0 5378 Kazachstania africana (strain ATCC 22294 / BCRC 22015 / CBS 2517 / CECT 1963 / NBRC 1671 / NRRL Y-8276) (Yeast) (Kluyveromyces africanus) UP000006310 1071383 KAZNA 5301 0 5321 Kazachstania naganishii (strain ATCC MYA-139 / BCRC 22969 / CBS 8797 / CCRC 22969 / KCTC 17520 / NBRC 10181 / NCYC 3082) (Yeast) (Saccharomyces naganishii) UP000006871 880591 KETVY 3199 10 3213 Ketogulonicigenium vulgare (strain Y25) UP000034491 1549748 None 3716 19 3736 Kiloniella litopenaei UP000001116 266940 KINRD 4639 35 4681 Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) UP000008366 1184609 None 4250 172 4422 Kineosphaera limosa NBRC 100340 UP000004088 888741 None 2500 17 2518 Kingella denitrificans ATCC 33394 UP000004207 887327 None 2100 2 2102 Kingella kingae ATCC 23330 UP000003009 629741 None 3144 16 3165 Kingella oralis ATCC 51147 UP000027178 1348663 None 7750 54 7810 Kitasatospora cheerisanensis KCTC 2395 UP000032066 2064 KITGR 5813 62 5916 Kitasatospora griseola (Streptomyces griseolosporeus) UP000007076 452652 KITSK 7408 35 7569 Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae) UP000051829 1736486 None 6246 62 6308 Kitasatospora sp. Root187 UP000019190 1432561 None 5300 13 5338 Klebsiella pneumoniae IS39 UP000019191 1432553 None 5343 21 5409 Klebsiella pneumoniae IS46 UP000019189 1432558 None 5404 11 5457 Klebsiella pneumoniae ISC21 UP000000265 272620 KLEP7 4955 171 5185 Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) UP000036622 1162296 None 4507 21 4543 Klebsiella pneumoniae subsp. pneumoniae DSM 30104 UP000028600 1006000 None 4629 22 4651 Kluyvera ascorbata ATCC 33433 UP000000598 284590 KLULA 5071 0 5101 Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (Yeast) (Candida sphaerica) UP000029990 1385518 None 3357 16 3373 Knoellia flava TL1 UP000051965 1736394 None 3223 19 3242 Knoellia sp. Soil729 UP000030011 1385521 None 3388 30 3418 Knoellia subterranea KCTC 19937 UP000009877 1236550 None 2549 12 2561 Kocuria palustris PEL UP000008838 378753 KOCRD 2303 49 2356 Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) UP000033173 1292021 None 3287 18 3305 Kocuria sp. UCD-OTCP UP000006468 714995 None 3284 19 3308 Komagataeibacter hansenii ATCC 23769 UP000019231 1296990 None 3534 30 3674 Komagataeibacter xylinus E25 UP000000314 644223 PICPG 5072 1 5075 Komagataella pastoris (strain GS115 / ATCC 20864) (Yeast) (Pichia pastoris) UP000001686 374847 KORCO 1599 3 1602 Korarchaeum cryptofilum (strain OPF8) UP000002945 391587 None 4428 49 4514 Kordia algicida OT-1 UP000002432 204669 KORVE 4757 14 4777 Koribacter versatilis (strain Ellin345) UP000002382 521045 KOSOT 2081 6 2118 Kosmotoga olearia (strain TBF 19.5.1) UP000035159 1330330 None 1892 5 1897 Kosmotoga pacifica UP000050509 186479 None 7817 19 7843 Kouleothrix aurantiaca UP000007967 479435 KRIFD 6882 58 6943 Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) UP000004508 485913 None 11110 101 11453 Ktedonobacter racemifer DSM 44963 UP000052107 1755590 None 1 0 1 Kunsagivirus A UP000019384 1382522 None 6026 1 6029 Kuraishia capsulata CBS 1993 UP000019225 1449976 None 8695 80 8820 Kutzneria albida DSM 43870 UP000030658 345341 None 10093 55 10200 Kutzneria sp. 744 UP000002368 562970 KYRT2 3103 32 3150 Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus tusciae) UP000006666 478801 KYTSD 2513 18 2554 Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541) (Micrococcus sedentarius) UP000049983 311410 None 6265 0 6276 Labrenzia alba UP000004703 244592 LABAD 5347 16 5385 Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11) (Stappia alexandrii) UP000017101 1397530 None 6355 42 6397 Labrenzia sp. C1B10 UP000001194 486041 LACBS 17894 1 18215 Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) (Bicoloured deceiver) (Laccaria laccata var. bicolor) UP000002036 559295 LACTC 5093 0 5103 Lachancea thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL Y-8284) (Yeast) (Kluyveromyces thermotolerans) UP000006599 936594 None 2578 10 2589 Lachnoanaerobaculum sp. ICM7 UP000014134 1235800 None 4265 15 4321 Lachnospiraceae bacterium 10-1 UP000014112 397287 None 3941 12 4025 Lachnospiraceae bacterium 28-4 UP000018451 742723 None 2044 12 2078 Lachnospiraceae bacterium 2_1_46FAA UP000014188 397288 None 4958 26 5078 Lachnospiraceae bacterium 3-1 UP000014117 1235799 None 4096 29 4216 Lachnospiraceae bacterium 3-2 UP000003336 658086 None 6460 45 6535 Lachnospiraceae bacterium 3_1_57FAA_CT1 UP000005617 658085 None 3343 22 3371 Lachnospiraceae bacterium 5_1_57FAA UP000003620 658088 None 2698 19 2720 Lachnospiraceae bacterium 9_1_43BFAA UP000014150 397290 None 5136 23 5215 Lachnospiraceae bacterium A2 UP000014118 397291 None 6408 32 6549 Lachnospiraceae bacterium A4 UP000018007 1262985 None 2470 11 2481 Lachnospiraceae bacterium CAG:215 UP000017986 1262983 None 2258 24 2282 Lachnospiraceae bacterium CAG:364 UP000014081 1235793 None 4597 17 4672 Lachnospiraceae bacterium COE1 UP000018967 1165092 None 3150 17 3167 Lachnospiraceae bacterium JC7 UP000014090 1235792 None 5230 33 5350 Lachnospiraceae bacterium M18-1 UP000032079 1392836 None 2899 19 2919 Lachnospiraceae bacterium TWA4 UP000008297 983544 LACS5 2947 11 2967 Lacinutrix sp. (strain 5H-3-7-4) UP000035709 1600 None 1598 14 1655 Lactobacillus acetotolerans UP000006381 272621 LACAC 1787 72 1860 Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM) UP000051008 1423718 None 1934 17 1951 Lactobacillus agilis DSM 20509 UP000051450 1423719 None 1493 12 1505 Lactobacillus algidus DSM 15638 UP000004069 585524 None 1659 25 1684 Lactobacillus amylolyticus DSM 11664 UP000051230 1423721 None 1524 8 1532 Lactobacillus amylophilus DSM 20533 = JCM 1125 UP000027129 1605 None 1830 14 1844 Lactobacillus animalis UP000051291 1423820 None 1371 15 1386 Lactobacillus aviarius subsp. araffinosus DSM 20653 UP000051461 1423726 None 2934 30 2964 Lactobacillus bifermentans DSM 20003 UP000051672 1423727 None 1848 15 1863 Lactobacillus brantae DSM 23927 UP000001652 387344 LACBA 2181 20 2218 Lactobacillus brevis (strain ATCC 367 / JCM 1170) UP000003176 525310 None 2957 82 3041 Lactobacillus brevis subsp. gravesensis ATCC 27305 UP000007332 1071400 None 2363 6 2377 Lactobacillus buchneri CD034 UP000051131 1423729 None 1782 19 1801 Lactobacillus cacaonum DSM 21116 UP000050865 1423730 None 2330 17 2347 Lactobacillus camelliae DSM 22697 = JCM 13995 UP000001651 321967 LACC3 2687 21 2771 Lactobacillus casei (strain ATCC 334) UP000051500 1122146 None 1236 8 1244 Lactobacillus ceti DSM 22408 UP000003987 575594 None 1618 34 1652 Lactobacillus coleohominis 101-4-CHN UP000051013 887896 None 1710 5 1715 Lactobacillus coleohominis DSM 14060 UP000051845 1423733 None 3122 35 3157 Lactobacillus collinoides DSM 20515 = JCM 1123 UP000051236 1423734 None 3252 8 3260 Lactobacillus composti DSM 18527 = JCM 14202 UP000051315 1423735 None 1708 12 1720 Lactobacillus concavus DSM 17758 UP000007271 1185325 None 1996 27 2031 Lactobacillus coryniformis subsp. coryniformis CECT 5711 UP000002371 748671 LACCS 1992 11 2022 Lactobacillus crispatus (strain ST1) UP000030361 1138822 None 1933 24 1957 Lactobacillus curieae UP000001259 390333 LACDA 1519 0 1562 Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081 / JCM 1002 / NBRC 13953 / NCIMB 11778) UP000051813 1423738 None 1676 15 1691 Lactobacillus dextrinicus DSM 20335 UP000052013 1423739 None 2930 32 2962 Lactobacillus diolivorans DSM 14421 UP000018559 1392007 None 2000 19 2019 Lactobacillus equi DPC 6820 UP000051084 1423742 None 1474 16 1490 Lactobacillus equigenerosi DSM 18793 = JCM 14505 UP000019247 1400520 None 3270 35 3360 Lactobacillus fabifermentans T30PCM01 UP000036225 1612 None 2194 23 5629 Lactobacillus farciminis UP000019488 1423743 None 3051 27 3079 Lactobacillus farraginis DSM 18382 = JCM 14108 UP000006910 712938 LACFC 1040 3 1051 Lactobacillus fermentum (strain CECT 5716) UP000051378 1423744 None 1210 12 1222 Lactobacillus floricola DSM 23037 = JCM 16512 UP000019474 1221538 None 1222 6 1228 Lactobacillus florum 8D UP000031397 1614 None 1270 11 1281 Lactobacillus fructivorans UP000051445 1423746 None 1629 12 1641 Lactobacillus frumenti DSM 13145 UP000051264 1423747 None 1968 16 1984 Lactobacillus fuchuensis DSM 14340 = JCM 11249 UP000004567 1144300 None 1258 11 1269 Lactobacillus gastricus PS3 UP000051451 1423750 None 2358 26 2384 Lactobacillus ghanensis DSM 18630 UP000036106 1007676 None 2320 17 2393 Lactobacillus ginsenosidimutans UP000051580 1423753 None 2467 20 2487 Lactobacillus hammesii DSM 16381 UP000051223 1423754 None 1704 10 1714 Lactobacillus hamsteri DSM 5661 = JCM 6256 UP000050949 1122147 None 2925 18 2943 Lactobacillus harbinensis DSM 16991 UP000051054 1423755 None 1519 17 1536 Lactobacillus hayakitensis DSM 18933 = JCM 14209 UP000000790 405566 LACH4 1566 14 1610 Lactobacillus helveticus (strain DPC 4571) UP000031620 1291742 None 2291 37 2344 Lactobacillus hokkaidonensis JCM 18461 UP000009320 1423758 None 1889 1 1891 Lactobacillus hominis DSM 23910 = CRBIP 24.179 UP000004115 525328 None 1196 18 1214 Lactobacillus iners DSM 13335 UP000051639 148604 None 1905 17 1922 Lactobacillus ingluviei UP000005177 525329 None 1418 18 1449 Lactobacillus jensenii JV-V16 UP000000581 257314 LACJO 1805 4 1818 Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533) UP000051036 1423763 None 1892 12 1904 Lactobacillus kalixensis DSM 16043 UP000050911 1302272 None 2435 35 2470 Lactobacillus kimchicus JCM 15530 UP000005025 797516 None 3305 20 3325 Lactobacillus kisonensis F0435 UP000037778 148814 None 1318 14 1926 Lactobacillus kunkeei UP000051565 1122148 None 1397 10 1407 Lactobacillus lindneri DSM 20690 = JCM 11027 UP000051712 1122149 None 1950 20 1970 Lactobacillus malefermentans DSM 5705 = KCTC 3548 UP000003355 1046596 None 2121 17 2139 Lactobacillus mali KCTC 3596 = DSM 20444 UP000051790 1423769 None 2903 18 2921 Lactobacillus manihotivorans DSM 13343 = JCM 12514 UP000033558 1218492 None 1574 18 1592 Lactobacillus mellifer UP000033695 1218508 None 1555 17 1572 Lactobacillus mellis UP000050872 1423770 None 2135 16 2153 Lactobacillus mindensis DSM 14500 UP000003645 1130798 None 1947 23 1990 Lactobacillus mucosae LM1 UP000051804 1291734 None 2078 14 2092 Lactobacillus nasuensis JCM 17158 UP000051248 1423775 None 2551 17 2568 Lactobacillus nodensis DSM 19682 = JCM 14932 = NBRC 107160 UP000051160 1423776 None 2350 32 2382 Lactobacillus odoratitofui DSM 19909 = JCM 15043 UP000051686 1423777 None 1928 17 1945 Lactobacillus oeni DSM 19972 UP000051697 1423778 None 1721 14 1735 Lactobacillus oligofermentans DSM 15707 = LMG 22743 UP000003070 908339 None 1977 61 2038 Lactobacillus oris PB013-T2-3 UP000028700 1291743 None 1852 38 1891 Lactobacillus oryzae JCM 18671 UP000052012 1423781 None 1393 12 1405 Lactobacillus ozensis DSM 23829 = JCM 17196 UP000051412 1423782 None 1835 17 1852 Lactobacillus panis DSM 6035 UP000004625 797515 None 3157 26 3183 Lactobacillus parafarraginis F0439 UP000009311 1423790 None 1824 1 1845 Lactobacillus pasteurii DSM 23907 = CRBIP 24.76 UP000051330 1423792 None 3034 18 3052 Lactobacillus perolens DSM 12744 UP000000303 508419 None 50 0 50 Lactobacillus phage c5 UP000000990 235201 None 46 0 46 Lactobacillus phage phijl1 UP000000432 220668 LACPL 3077 11 3099 Lactobacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) UP000051886 449659 None 2074 20 2094 Lactobacillus pobuzihii UP000051085 1423794 None 1575 10 1585 Lactobacillus pontis DSM 8475 UP000051638 1423796 None 2175 16 2192 Lactobacillus rennini DSM 20253 UP000001991 557436 LACRD 1864 1 1900 Lactobacillus reuteri (strain DSM 20016) UP000003637 947828 None 3194 55 3255 Lactobacillus rhamnosus MTCC 5462 UP000051999 1114972 None 2612 23 2635 Lactobacillus rossiae DSM 15814 UP000001279 1069534 LACRR 1805 46 1862 Lactobacillus ruminis (strain ATCC 27782 / RF3) UP000011912 1227363 None 1502 17 1519 Lactobacillus saerimneri 30a UP000002707 314315 LACSS 1867 5 1884 Lactobacillus sakei subsp. sakei (strain 23K) UP000006559 362948 LACS1 1864 134 2014 Lactobacillus salivarius (strain UCC118) UP000001285 714313 LACSM 1231 32 1284 Lactobacillus sanfranciscensis (strain TMW 1.1304) UP000050969 1293598 None 2317 16 2334 Lactobacillus saniviri JCM 17471 = DSM 24301 UP000050934 396268 None 1459 7 1467 Lactobacillus secaliphilus UP000051645 81857 None 2016 15 3973 Lactobacillus selangorensis UP000051256 1423802 None 1526 13 1539 Lactobacillus senioris DSM 24302 = JCM 17472 UP000051589 1423803 None 2040 17 2059 Lactobacillus senmaizukei DSM 21775 = NBRC 103853 UP000051679 1291052 None 2255 16 2271 Lactobacillus sharpeae JCM 1186 = DSM 20505 UP000030647 1231336 None 3033 109 3142 Lactobacillus shenzhenensis LY-73 UP000051139 348151 None 1905 17 1922 Lactobacillus siliginis UP000051442 1423804 None 2968 32 3000 Lactobacillus similis DSM 23365 = JCM 2765 UP000012594 97137 None 1921 9 1930 Lactobacillus sp. ASF360 UP000029494 1545702 None 1762 10 1772 Lactobacillus sp. wkB8 UP000033491 216463 None 2312 24 2414 Lactobacillus spicheri UP000050961 1423806 None 2228 6 2234 Lactobacillus sucicola DSM 21376 = JCM 15457 UP000051820 1423807 None 2419 30 2449 Lactobacillus suebicus DSM 5007 = KCTC 3549 UP000051789 1423810 None 1845 15 1860 Lactobacillus thailandensis DSM 22698 = JCM 13996 UP000050929 1423811 None 2039 11 2050 Lactobacillus tucceti DSM 20183 UP000051733 1423813 None 2370 28 2398 Lactobacillus vaccinostercus DSM 20634 UP000004483 1423814 None 1841 29 1870 Lactobacillus vaginalis DSM 5837 = ATCC 49540 UP000051576 1133569 None 2085 23 2108 Lactobacillus vini DSM 20605 UP000008520 420890 LACGL 1922 16 1968 Lactococcus garvieae (strain Lg2) (Enterococcus seriolicida) UP000015854 1234876 None 2298 12 2334 Lactococcus lactis subsp. cremoris TIFN6 UP000002196 272623 LACLA 2223 2 2268 Lactococcus lactis subsp. lactis (strain IL1403) (Streptococcus lactis) UP000000839 31532 None 54 0 54 Lactococcus phage SK1 UP000001835 31537 BPLC2 39 0 39 Lactococcus phage c2 UP000033166 297352 None 2349 12 2403 Lactococcus piscium MKFS47 UP000009323 1215915 None 2336 10 2359 Lactococcus raffinolactis 4877 UP000007771 33727 MABVM 7 0 7 Lake Victoria marburgvirus (strain Musoke-80) (MARV) (Marburg virus (strain Kenya/Musoke/1980)) UP000050580 1610491 None 2572 21 2626 Lampropedia cohaerens UP000002010 557598 LARHH 3200 8 3238 Laribacter hongkongensis (strain HLHK9) UP000036403 67767 LASNI 18039 5 18246 Lasius niger (Black garden ant) UP000002473 11622 LASSJ 4 0 4 Lassa virus (strain Mouse/Sierra Leone/Josiah/1976) (LASV) UP000051457 1703781 None 2493 60 2553 Latescibacteria bacterium DG_63 UP000008672 7897 LATCH 19474 3960 23442 Latimeria chalumnae (West Indian ocean coelacanth) UP000011021 887898 None 2641 24 2666 Lautropia mirabilis ATCC 51599 UP000002430 363253 LAWIP 1289 53 1342 Lawsonia intracellularis (strain PHE/MN1-00) UP000007435 649349 LEAB4 3411 18 3465 Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) UP000050454 1605367 None 3628 14 3642 Leadbetterella sp. JN14-9 UP000033393 68170 NOCAE 8176 61 8238 Lechevalieria aerocolonigenes (Nocardia aerocolonigenes) (Saccharothrix aerocolonigenes) UP000032180 77586 None 29014 7761 36814 Leersia perrieri UP000001601 398720 LEEBM 3652 35 3735 Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) (Flavobacterium sp. (strain MED217)) UP000002770 658187 None 3939 20 3959 Legionella drancourtii LLAP12 UP000032430 1212491 None 3730 110 3850 Legionella fallonii LLAP-10 UP000032803 449 LEGHA 3154 60 3218 Legionella hackeliae UP000001060 661367 LEGLN 3390 70 3470 Legionella longbeachae serogroup 1 (strain NSW150) UP000044071 1034943 None 3749 1 7534 Legionella massiliensis UP000018838 1268635 None 2899 8 2932 Legionella oakridgensis ATCC 33761 = DSM 21215 UP000000609 272624 LEGPH 2867 63 2942 Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) UP000016605 1358026 None 4838 24 4862 Leifsonia aquatica ATCC 14665 UP000050966 1736341 None 3831 26 3857 Leifsonia sp. Leaf336 UP000051914 1736426 None 3023 23 3046 Leifsonia sp. Root112D2 UP000051819 1736496 None 3650 24 3674 Leifsonia sp. Root227 UP000051360 1736525 None 3373 19 3392 Leifsonia sp. Root4 UP000051073 1736567 None 3218 16 3234 Leifsonia sp. Root60 UP000001306 281090 LEIXX 1909 92 2027 Leifsonia xyli subsp. xyli (strain CTCB07) UP000006721 58103 LRVLG 3 0 3 Leishmania RNA virus 1 - 1 (isolate Leishmania guyanensis) (LRV-1-1) UP000007258 5660 LEIBR 8051 33 8159 Leishmania braziliensis UP000008153 5671 LEIIN 8035 10 8148 Leishmania infantum UP000000542 5664 LEIMA 8031 7 8354 Leishmania major UP000018780 999552 None 4483 25 4530 Leisingera methylohalidivorans DSM 14336 UP000028624 1005999 None 3737 19 3758 Leminorella grimontii ATCC 33999 = DSM 5078 UP000050331 1472767 None 3526 27 3553 Lentibacillus amyloliquefaciens UP000004947 313628 None 4957 25 5104 Lentisphaera araneosa HTCC2155 UP000018468 7918 LEPOC 18296 4167 22483 Lepisosteus oculatus (Spotted gar) UP000050430 229920 None 2909 27 2939 Leptolinea tardivitalis UP000017515 1385935 None 7040 68 7223 Leptolyngbya sp. Heron Island J UP000010389 111781 None 4121 32 4228 Leptolyngbya sp. PCC 7376 UP000037923 157538 None 9272 0 9872 Leptomonas pyrrhocoris UP000038009 5684 LEPSE 8480 0 8507 Leptomonas seymouri UP000005737 929563 None 4112 17 4161 Leptonema illini DSM 21528 UP000002668 985895 LEPMJ 12607 1 12609 Leptosphaeria maculans (strain JN3 / isolate v23.1.3 / race Av1-4-5-6-7-8) (Blackleg fungus) (Phoma lingam) UP000001847 456481 LEPBP 3712 11 3726 Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) UP000011783 1193007 None 4769 4 4776 Leptospira borgpetersenii str. 200701203 UP000001408 189518 LEPIN 3418 258 3707 Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) UP000012139 1085538 None 6011 3 6039 Leptospira interrogans serovar Bataviae str. HAI135 UP000012092 1049910 None 5186 5 5198 Leptospira interrogans serovar Icterohaemorrhagiae str. Verdun HP UP000012117 1193029 None 5227 2 5279 Leptospira interrogans serovar Pyrogenes str. 200701872 UP000004889 1049972 None 3916 11 3931 Leptospira licerasiae serovar Varillal str. VAR 010 UP000011770 1088540 None 4866 5 4981 Leptospira weilii serovar Topaz str. LT2116 UP000006177 1048260 LEPFM 2442 8 2471 Leptospirillum ferriphilum (strain ML-04) UP000009374 412449 None 2646 7 2658 Leptospirillum ferrodiazotrophum UP000007382 1162668 LEPFC 2383 30 2421 Leptospirillum ferrooxidans (strain C2-3) UP000017751 1260983 None 1874 4 1879 Leptospirillum sp. Group IV 'UBA BS' UP000001693 395495 LEPCP 4315 28 4363 Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix discophora (strain SP-6)) UP000001910 523794 LEPBD 2207 11 2220 Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249 / C-1013-b) UP000004226 596323 None 2336 38 2375 Leptotrichia goodfellowii F0264 UP000016640 1321779 None 2252 8 2261 Leptotrichia sp. oral taxon 215 str. W9775 UP000008154 652962 LBVAV 6 0 6 Lettuce big-vein associated virus (isolate Japan/Kagawa) (LBVaV) UP000001099 651355 LIYV9 9 0 9 Lettuce infectious yellows virus (isolate United States/92) (LIYV) UP000008592 928304 LNYV3 6 0 6 Lettuce necrotic yellows virus (isolate 318) (LNYV) UP000032120 55969 None 2681 22 2703 Leucobacter komagatae UP000033836 1642040 None 3001 27 3028 Leucobacter sp. Ag1 UP000026917 1292023 None 2856 22 2878 Leucobacter sp. UCD-THU UP000006299 1229758 LEUCJ 1675 15 1691 Leuconostoc carnosum (strain JB16) UP000002166 349519 LEUCK 1803 9 1820 Leuconostoc citreum (strain KM20) UP000050501 229921 None 3057 23 3715 Levilinea saccharolytica UP000002744 537021 LIBAP 1091 11 1109 Liberibacter asiaticus (strain psy62) UP000010799 1215343 LIBCB 1371 5 1378 Liberibacter crescens (strain BT-1) UP000027586 1263082 None 12135 1122 13402 Lichtheimia corymbifera JMRC:FSU:9682 UP000010322 391597 None 3218 26 3245 Limnobacter sp. MED105 UP000033607 1637645 None 4990 45 5458 Limnoraphis robusta CS-951 UP000019246 1265818 None 2682 23 2707 Listeria aquatica FSL S10-1188 UP000019254 1265820 None 3319 27 3347 Listeria cornellensis FSL F6-969 UP000019241 1265822 None 3437 32 3470 Listeria fleischmannii FSL S10-1203 UP000004950 1081736 None 2879 30 2909 Listeria fleischmannii subsp. coloradonensis UP000019249 1265817 None 2878 26 2905 Listeria floridensis FSL S10-1187 UP000010119 525367 None 2573 48 2625 Listeria grayi DSM 20601 UP000000817 169963 LISMO 2831 13 2846 Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) UP000019244 1265846 None 3228 26 3254 Listeria rocourtiae FSL F6-920 UP000029855 1497679 None 3310 22 3335 Listeriaceae bacterium FSL A5-0209 UP000015351 1123360 None 3622 18 3641 Litoreibacter arenae DSM 19593 UP000029776 1559366 LLOVA 9 0 9 Lloviu cuevavirus (isolate Bat/Spain/Asturias-Bat86/2003) UP000007040 7209 LOALO 14871 443 15328 Loa loa (Eye worm) (Filaria loa) UP000001996 379508 LODEL 5779 0 5799 Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) (Yeast) (Saccharomyces elongisporus) UP000034722 1538547 None 5361 17 5384 Lokiarchaeum sp. GC14_75 UP000025047 1122180 None 3094 8 3109 Loktanella hongkongensis DSM 17492 UP000050370 1700845 None 3550 19 3569 Loktanella sp. 1ANDIMAR09 UP000051463 1225657 None 3510 17 3527 Loktanella sp. 3ANDIMAR09 UP000033741 579483 None 3281 15 3296 Loktanella sp. S4079 UP000004507 314232 None 3050 11 3068 Loktanella vestfoldensis SKA53 UP000008689 686945 LOLV 6 0 6 Lolium latent virus (isolate Lolium/USA/US1/-) (LoLV) UP000030746 225164 LOTGI 23660 15 23801 Lottia gigantea (Giant owl limpet) UP000007646 9785 LOXAF 19954 5670 25656 Loxodonta africana (African elephant) UP000037069 7375 LUCCU 14348 5 14452 Lucilia cuprina (Green bottle fly) (Australian sheep blowfly) UP000004699 565045 None 2921 2 2930 Luminiphilus syltensis NOR5-1B UP000013909 1232681 None 4825 0 4826 Lunatimonas lonarensis UP000035585 1440763 None 3541 16 3557 Luteibacter rhizovicinus DSM 16549 UP000033651 345309 None 3829 15 3844 Luteibacter yeojuensis UP000035397 1547516 None 3191 9 3219 Luteimonas sp. FCS-9 UP000017819 631454 None 4149 15 4165 Lutibaculum baratangense AMV1 UP000006712 648169 LDCPR 10 0 10 Lymantria dispar cypovirus 1 (isolate Rao) (LdCPV-1) UP000000516 654922 LCDV1 1 0 1 Lymphocystis disease virus 1 (isolate Darai) (LCDV-1) UP000002474 11624 LYCVA 4 0 4 Lymphocytic choriomeningitis virus (strain Armstrong) (LCMV) UP000031561 1574623 None 5927 133 6092 Lyngbya confervoides BDU141951 UP000000737 313612 LYNSP 6054 56 6142 Lyngbya sp. (strain PCC 8106) (Lyngbya aestuarii (strain CCY9616)) UP000050668 1293441 None 3628 28 3666 Lysinibacillus contaminans UP000030416 1384049 None 3519 34 3553 Lysinibacillus manganicus DSM 26584 UP000030595 1211035 None 3470 29 3499 Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 UP000030437 1220589 None 4080 29 4109 Lysinibacillus odysseyi 34hs-1 = NBRC 100172 UP000030408 1384057 None 3500 40 3540 Lysinibacillus sinduriensis BLB-1 = JCM 15800 UP000030963 1571920 None 4401 47 4449 Lysinibacillus sp. A1 UP000029097 1473546 None 2389 18 2407 Lysinibacillus sp. BF-4 UP000029989 913325 None 2355 8 2363 Lysobacter arseniciresistens ZS79 UP000023435 1444315 None 5276 0 5282 Lysobacter capsici AZ78 UP000030017 1122185 None 2221 11 2232 Lysobacter concretionis Ko07 = DSM 16239 UP000029998 1385517 None 2563 7 2570 Lysobacter daejeonensis GH1-9 UP000030003 1385515 None 2438 5 2443 Lysobacter defluvii IMMIB APB-9 = DSM 18482 UP000030518 1300345 None 3151 3 3155 Lysobacter dokdonensis DS-58 UP000032077 1199154 None 2546 13 2560 Lysobacter sp. A03 UP000051738 1736549 None 3002 5 3007 Lysobacter sp. Root494 UP000050805 1736612 None 3820 7 3827 Lysobacter sp. Root96 UP000009130 9541 MACFA 17388 14 17464 Macaca fascicularis (Crab-eating macaque) (Cynomolgus monkey) UP000006718 9544 MACMU 21726 13929 35743 Macaca mulatta (Rhesus macaque) UP000001383 458233 MACCJ 2029 30 2061 Macrococcus caseolyticus (strain JCSC5402) UP000007129 1126212 MACPH 13798 3 13803 Macrophomina phaseolina (strain MS6) (Charcoal rot fungus) UP000037099 100816 None 10484 2 10486 Madurella mycetomatis UP000008234 699246 MAGIU 1554 12 1567 Mageeibacillus indolicus (strain UPII9-5) (Clostridiales genomosp. BVAB3 (strain UPII9-5)) UP000009058 242507 MAGO7 12534 115 12792 Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) (Rice blast fungus) (Pyricularia oryzae) UP000011715 644358 MAGP6 11206 97 11306 Magnaporthiopsis poae (strain ATCC 64411 / 73-15) (Kentucky bluegrass fungus) (Magnaporthe poae) UP000002586 156889 MAGMM 3580 14 3716 Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) UP000032733 1288970 None 3623 77 3775 Magnetospira sp. QH-2 UP000018922 1430440 None 4043 111 4255 Magnetospirillum gryphiswaldense MSR-1 v2 UP000007058 342108 MAGSA 4501 13 4559 Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) UP000008457 697281 MAHA5 2842 16 2870 Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) UP000007071 882210 MCMVK 4 0 4 Maize chlorotic mottle virus (isolate United States/Kansas/1987) (MCMV) UP000008593 928305 MMVR 6 0 6 Maize mosaic virus (isolate Maize/United States/Reed/2005) (MMV) UP000029759 137556 MNESV 5 0 5 Maize necrotic streak virus (MNeSV) UP000000400 652669 MRFVC 2 1 3 Maize rayado fino virus (isolate Costa Rica/Guapiles) (MRFV) UP000006541 10824 MSVS 4 0 4 Maize streak virus genotype A (isolate South Africa) (MSV) UP000008837 425265 MALGO 4273 1 4286 Malassezia globosa (strain ATCC MYA-4612 / CBS 7966) (Dandruff-associated fungus) UP000037751 77020 None 4201 0 4202 Malassezia pachydermatis UP000016925 1230383 MALS4 3316 2 3318 Malassezia sympodialis (strain ATCC 42132) (Atopic eczema-associated yeast) UP000027726 1224318 None 4735 46 4795 Mangrovibacter sp. MFB070 UP000028521 1197477 None 2297 10 2316 Mangrovimonas yunxiaonensis UP000012987 1316932 None 2703 2 2728 Mannheimia haemolytica M42548 UP000000607 221988 MANSM 1947 420 2383 Mannheimia succiniciproducens (strain MBEL55E) UP000001602 313603 MARSH 3398 13 3411 Maribacter sp. (strain HTCC2170 / KCCM 42371) UP000001964 394221 MARMM 3054 6 3063 Maricaulis maris (strain MCS10) UP000005275 765910 None 3219 30 3256 Marichromatium purpuratum 984 UP000010953 1239962 None 4622 11 4633 Mariniradius saccharolyticus AK6 UP000007030 869210 MARHT 2180 14 2205 Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) UP000007161 443254 MARPK 2033 11 2046 Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) UP000007077 225937 MARAH 4352 55 4410 Marinobacter adhaerens (strain HP15) UP000000998 351348 MARHV 4142 28 4272 Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT8) UP000016540 1318628 None 3610 17 3627 Marinobacter lipolyticus SM19 UP000013165 626887 None 4691 41 4765 Marinobacter nanhaiticus D15-8W UP000035081 1420917 None 3150 17 3168 Marinobacter salarius UP000011757 490759 None 3531 354 3887 Marinobacter sp. BSs20148 UP000028252 1232683 None 4105 36 4143 Marinobacterium sp. AK27 UP000001062 717774 MARM1 4092 26 4121 Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) UP000001113 400668 MARMS 4388 28 4439 Marinomonas sp. (strain MWYL1) UP000033747 579484 None 4589 29 4621 Marinomonas sp. S3726 UP000036352 988812 None 4941 35 5005 Marinovum algicola DG 898 UP000005297 314345 None 2841 15 2866 Mariprofundus ferrooxydans PV-1 UP000002931 314271 None 4675 17 4712 Maritimibacter alkaliphilus HTCC2654 UP000008720 643867 MARTH 3738 10 3757 Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) (Microscilla tractuosa) (Flexibacter tractuosus) UP000051542 1736379 None 3435 19 3454 Marmoricola sp. Leaf446 UP000029780 694581 GBMV 428 0 428 Marseillevirus marseillevirus (GBM) UP000006753 1072389 MARBU 10036 1 10038 Marssonina brunnea f. sp. multigermtubi (strain MB_m1) (Marssonina leaf spot fungus) UP000032611 1486262 None 3995 25 4028 Martelella endophytica UP000005561 478749 None 4815 79 4895 Marvinbryantia formatexigens DSM 14469 UP000028843 1549812 None 4007 27 4053 Massilia sp. BSC265 UP000029701 1519190 None 5513 47 5571 Massilia sp. JS1662 UP000051760 1736272 None 4517 27 4544 Massilia sp. Leaf139 UP000051876 1736522 None 6005 54 6059 Massilia sp. Root351 UP000036336 1406431 None 4894 33 4929 Massilia sp. WF1 UP000009874 883126 None 5066 30 5236 Massilia timonae CCUG 45783 UP000032368 1594576 None 5842 88 5950 Mastigocladus laminosus UU774 UP000007018 654915 MNPVA 6 0 6 Mastomys natalensis papillomavirus (isolate African multimammate rat) (MnPV) UP000008699 645098 MEASC 8 0 8 Measles virus (strain Ichinose-B95a) (MeV) (Subacute sclerose panencephalitis virus) UP000002051 3880 MEDTR 49941 7125 57599 Medicago truncatula (Barrel medic) (Medicago tribuloides) UP000008806 657316 None 2113 5 2118 Megamonas hypermegale ART12/1 UP000015102 36166 MEGSC 11459 7 11467 Megaselia scalaris (Humpbacked fly) (Phora scalaris) UP000036503 1122219 None 2822 21 2879 Megasphaera cerevisiae DSM 20462 UP000010111 1064535 None 2182 12 2220 Megasphaera elsdenii DSM 20460 UP000003242 699218 None 1575 35 1610 Megasphaera genomosp. type_1 str. 28L UP000003195 706434 None 1756 15 1774 Megasphaera micronuciformis F0359 UP000017090 1111454 None 2193 3 2196 Megasphaera sp. BV3C16-1 UP000029749 980964 MEGR1 1 0 1 Megrivirus A (isolate Turkey/USA/124/2008) (Turkey hepatitis virus 2993D (isolate 124)) UP000013026 504728 MEIRD 3022 15 3056 Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) (Thermus ruber) UP000001916 526227 MEISD 3365 18 3505 Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus silvanus) UP000001072 747676 MELLP 16235 2 16372 Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) (Poplar leaf rust fungus) UP000001645 9103 MELGA 14112 2424 16539 Meleagris gallopavo (Common turkey) UP000009011 1191523 MELRP 2807 26 2840 Melioribacter roseus (strain JCM 17771 / P3M-2) UP000008456 940190 MELPT 1864 12 1885 Melissococcus plutonius (strain ATCC 35311 / CIP 104052 / LMG 20360 / NCIMB 702443) UP000046399 53468 None 9037 12 9049 Mesocestoides corti UP000006647 265311 MESFL 683 0 683 Mesoplasma florum (strain ATCC 33453 / NBRC 100688 / NCTC 11704 / L1) (Acholeplasma florum) UP000003250 1107882 None 7146 49 7195 Mesorhizobium alhagi CCNWXJ12-2 UP000002949 1082933 None 7037 46 7084 Mesorhizobium amorphae CCNWGS0123 UP000007471 765698 MESCW 6210 50 6264 Mesorhizobium ciceri biovar biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) UP000012062 1297569 None 6431 265 6696 Mesorhizobium metallidurans STM 2683 UP000019863 1287182 None 7588 76 7665 Mesorhizobium sp. L48C026A00 UP000050670 1120658 None 5512 47 5562 Mesorhizobium sp. LC103 UP000020180 1287252 None 6692 56 6749 Mesorhizobium sp. LNHC252B00 UP000018524 1287292 None 6957 69 7027 Mesorhizobium sp. LSHC420B00 UP000045063 1505946 None 6397 289 6686 Mesorhizobium sp. SOD10 UP000002881 660470 None 2488 11 2574 Mesotoga prima MesG1.Ag.4.2 UP000000242 399549 METS5 2246 10 2256 Metallosphaera sedula (strain ATCC 51363 / DSM 5348) UP000002499 655827 METAQ 9830 0 9849 Metarhizium acridum (strain CQMa 102) UP000030816 1081103 None 8388 1 8472 Metarhizium album ARSEF 1941 UP000002498 655844 METRA 11682 2 11688 Metarhizium robertsii (strain ARSEF 23 / ATCC MYA-3075) (Metarhizium anisopliae (strain ARSEF 23)) UP000007490 877455 METLA 2477 16 2493 Methanobacterium lacus (strain AL-21) UP000009231 868131 METPW 2377 17 2397 Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1) UP000017867 1379702 None 2011 2 2021 Methanobacterium sp. MB1 UP000008680 634498 METRM 2204 5 2217 Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / OCM 146 / M1) (Methanobacterium ruminantium) UP000001992 420247 METS3 1778 5 1795 Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) UP000014066 224719 None 1661 2 1671 Methanobrevibacter sp. AbM4 UP000002061 573063 METIM 1433 6 1441 Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) UP000000805 243232 METJA 1787 0 1788 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) UP000000663 351160 METAR 3064 7 3085 Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50) UP000001882 304371 METPS 2987 6 3004 Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) UP000001979 259564 METBU 2200 42 2272 Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) UP000001106 419665 META3 1480 10 1490 Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) UP000000590 267377 METMP 1695 27 1722 Methanococcus maripaludis (strain S2 / LL) UP000007722 456320 METV3 1653 5 1717 Methanococcus voltae (strain ATCC BAA-1334 / A3) UP000000365 410358 METLZ 1728 11 1739 Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) UP000002146 368407 METMJ 2458 18 2489 Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) UP000051748 1735326 None 2027 24 2051 Methanoculleus sp. SDB UP000005095 28892 None 2408 15 2424 Methanofollis liminatans DSM 4140 UP000000391 644295 METEZ 2236 14 2254 Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) UP000001059 547558 METMS 1972 14 1987 Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) UP000006565 679926 METP4 2767 12 2785 Methanolacinia petrolearia (strain DSM 11571 / OCM 486 / SEBR 4847) (Methanoplanus petrolearius) UP000050878 1735327 None 2019 18 2047 Methanolinea sp. SDB UP000000459 1094980 None 3111 21 3167 Methanolobus psychrophilus R15 UP000051144 1713724 None 1869 8 1877 Methanomassiliicoccales archaeon RumEn M1 UP000010866 867904 METHD 2531 20 2556 Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) UP000005741 937775 None 2907 21 2942 Methanoplanus limicola DSM 2279 UP000001826 190192 METKA 1683 4 1687 Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) UP000002408 456442 METB6 2431 19 2450 Methanoregula boonei (strain 6A8) UP000010824 593750 METFS 2789 26 2816 Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) UP000007807 990316 METCG 2735 56 2850 Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) (Methanothrix concilii) UP000005877 1110509 METH6 2341 17 2371 Methanosaeta harundinacea (strain 6Ac) UP000051107 1735328 None 1841 14 1867 Methanosaeta sp. SDB UP000000674 349307 METTP 1661 12 1696 Methanosaeta thermophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) (Methanothrix thermophila) UP000006622 679901 METZD 1956 16 1976 Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) (Methanohalophilus zhilinae) UP000002487 188937 METAC 4296 172 4540 Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) UP000008156 269797 METBF 3585 31 3629 Methanosarcina barkeri (strain Fusaro / DSM 804) UP000000595 192952 METMA 3254 49 3371 Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) (Methanosarcina frisia) UP000033049 1434100 None 3208 30 3250 Methanosarcina sp. MTP4 UP000001931 339860 METST 1531 2 1534 Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) UP000002457 521011 METPE 2632 23 2655 Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) UP000001941 323259 METHJ 3070 17 3131 Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) UP000005223 187420 METTH 1868 1 1872 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (Methanobacterium thermoautotrophicum) UP000002315 523846 METFV 1277 6 1283 Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) UP000009149 481448 METI4 2126 344 2472 Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4)) UP000000366 420662 METPP 4280 79 4449 Methylibium petroleiphilum (strain PM1) UP000002440 265072 METFK 2596 13 2753 Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) UP000004664 697282 None 4155 39 4241 Methylobacter tundripaludum SV96 UP000009081 272630 METEA 6036 197 6234 Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) UP000008207 460265 METNO 8065 63 8309 Methylobacterium nodulans (strain ORS2060 / LMG 21967) UP000036498 427683 None 5598 45 5645 Methylobacterium platani UP000006589 426355 METRJ 6347 41 6431 Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) UP000001185 426117 METS4 6606 41 6692 Methylobacterium sp. (strain 4-46) UP000052064 1736254 None 4375 26 4402 Methylobacterium sp. Leaf104 UP000052067 1736364 None 3864 21 3885 Methylobacterium sp. Leaf399 UP000052050 1736251 None 4078 31 4109 Methylobacterium sp. Leaf99 UP000031643 1384459 None 3328 13 3342 Methyloceanibacter caenitepidi UP000002257 395965 METSB 3794 22 3818 Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) UP000033684 1632867 None 2942 5 2947 Methylococcaceae bacterium Sn10-6 UP000006821 243233 METCA 2920 5 2959 Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) UP000005263 187303 METSZ 4005 35 4056 Methylocystis sp. (strain SC2) UP000017842 1116472 None 3554 183 3737 Methyloglobulus morosus KoM1 UP000005090 686340 None 3702 36 3794 Methylomicrobium album BG8 UP000008315 1091494 META2 3946 95 4086 Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) UP000030512 1538553 None 3682 23 3707 Methylomonas denitrificans UP000008888 857087 METMM 4403 32 4494 Methylomonas methanica (strain MC09) UP000003544 1026882 None 3156 18 3174 Methylophaga aminisulfidivorans MP UP000009145 754477 METFJ 2676 13 2691 Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) UP000012019 1286106 None 2520 16 2536 Methylophaga lonarensis MPL UP000009144 754476 METNJ 2998 13 3023 Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) UP000004679 637616 None 2487 5 3001 Methylophaga thiooxydans DMS010 UP000022668 1101195 None 2574 15 2593 Methylophilaceae bacterium 11 UP000050891 1736373 None 2658 14 2672 Methylophilus sp. Leaf416 UP000002742 583345 METML 2321 13 2338 Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) UP000000383 666681 METV0 2738 14 2764 Methylotenera versatilis (strain 301) UP000005019 1000565 METUF 3892 27 3926 Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 / FAM5) UP000002743 582744 METGS 2888 19 2910 Methylovorus glucosetrophus (strain SIP3-4) UP000001997 294746 PICGU 5919 0 5921 Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) (Yeast) (Candida guilliermondii) UP000009286 856793 MICAA 2426 6 2432 Micavibrio aeruginosavorus (strain ARL-13) UP000033448 582680 None 3741 3 3766 Microbacterium azadirachtae UP000037737 84292 None 2705 16 2721 Microbacterium chocolatum UP000033572 104336 None 3324 0 3324 Microbacterium foliorum UP000033451 400772 None 2778 1 2964 Microbacterium ginsengisoli UP000033900 273678 None 3663 0 3663 Microbacterium hydrocarbonoxydans UP000033956 92835 None 3448 0 3479 Microbacterium ketosireducens UP000004547 1160710 None 3226 23 3249 Microbacterium laevaniformans OR221 UP000031030 1348253 None 3482 27 3509 Microbacterium mangrovi UP000024001 273677 None 2777 4 2781 Microbacterium oleivorans UP000033640 82380 None 3588 0 3599 Microbacterium oxydans UP000028883 1177594 None 3096 69 3165 Microbacterium sp. C448 UP000027096 1479651 None 2700 17 2718 Microbacterium sp. CH12i UP000050802 1736483 None 3021 15 3036 Microbacterium sp. Root180 UP000051407 1736553 None 2596 13 2610 Microbacterium sp. Root53 UP000051216 1736570 None 3612 17 3629 Microbacterium sp. Root61 UP000033425 1263625 None 3727 5 3732 Microbacterium sp. SA39 UP000032117 1504156 None 4545 50 4630 Microbacterium sp. SUBG005 UP000018080 1344956 None 3132 23 3156 Microbacterium sp. TS-1 UP000008975 979556 MICTS 3631 40 3676 Microbacterium testaceum (strain StLB037) UP000034098 69370 None 4075 0 4075 Microbacterium trichothecenolyticum UP000018869 316330 None 7721 79 7802 Microbispora sp. ATCC PTA-5024 UP000017200 683840 USTV1 7354 302 7666 Microbotryum lychnidis-dioicae (strain p1A1 Lamole / MvSl-1064) (Anther smut fungus) UP000000738 465515 MICLC 2199 8 2236 Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230) (Micrococcus lysodeikticus) UP000010471 1173027 None 6337 60 6441 Microcoleus sp. PCC 7113 UP000001510 449447 MICAN 5891 90 6311 Microcystis aeruginosa (strain NIES-843) UP000051496 1703769 None 448 0 448 Microgenomates bacterium DG_75 UP000034718 1618496 None 1012 4 1016 Microgenomates group bacterium GW2011_GWA1_48_10 UP000034781 1618493 None 520 3 523 Microgenomates group bacterium GW2011_GWA1_Microgenomates_45_10 UP000034211 1618497 None 516 0 516 Microgenomates group bacterium GW2011_GWA2_37_6 UP000034208 1618498 None 735 1 736 Microgenomates group bacterium GW2011_GWA2_39_19 UP000034953 1618499 None 643 0 643 Microgenomates group bacterium GW2011_GWA2_40_6 UP000034618 1618500 None 1295 1 1296 Microgenomates group bacterium GW2011_GWA2_44_7 UP000034885 1618501 None 712 8 720 Microgenomates group bacterium GW2011_GWA2_46_16 UP000034318 1618502 None 669 2 671 Microgenomates group bacterium GW2011_GWA2_46_7 UP000034016 1618503 None 777 5 782 Microgenomates group bacterium GW2011_GWA2_47_8 UP000034379 1618504 None 568 0 568 Microgenomates group bacterium GW2011_GWB1_40_9 UP000034461 1618506 None 1039 4 1043 Microgenomates group bacterium GW2011_GWB1_45_17 UP000034251 1618510 None 1049 2 1051 Microgenomates group bacterium GW2011_GWC1_37_12b UP000034948 1618512 None 1181 6 1187 Microgenomates group bacterium GW2011_GWC1_38_12 UP000033877 1618513 None 392 0 392 Microgenomates group bacterium GW2011_GWC1_38_14 UP000034167 1618514 None 832 1 833 Microgenomates group bacterium GW2011_GWC1_39_12 UP000034535 1618515 None 635 0 635 Microgenomates group bacterium GW2011_GWC1_39_7 UP000034178 1618516 None 612 7 619 Microgenomates group bacterium GW2011_GWC1_39_7b UP000033948 1618518 None 553 0 553 Microgenomates group bacterium GW2011_GWC1_41_20 UP000034304 1618519 None 1096 4 1100 Microgenomates group bacterium GW2011_GWC1_41_8 UP000034204 1618520 None 1118 3 1121 Microgenomates group bacterium GW2011_GWC1_43_11 UP000034809 1618521 None 762 2 764 Microgenomates group bacterium GW2011_GWC1_43_13 UP000033894 1618523 None 965 1 966 Microgenomates group bacterium GW2011_GWC1_44_23 UP000034522 1618525 None 858 0 858 Microgenomates group bacterium GW2011_GWC1_44_9 UP000034323 1618527 None 779 0 779 Microgenomates group bacterium GW2011_GWC1_46_16 UP000034149 1618528 None 902 1 903 Microgenomates group bacterium GW2011_GWC1_46_20 UP000034729 1618530 None 468 0 468 Microgenomates group bacterium GW2011_GWC1_49_7 UP000034847 1618531 None 575 0 575 Microgenomates group bacterium GW2011_GWC2_45_8 UP000034584 1618532 None 496 0 496 Microgenomates group bacterium GW2011_GWC2_46_7 UP000034788 1618536 None 516 0 516 Microgenomates group bacterium GW2011_GWF1_38_5 UP000034538 1618537 None 1088 1 1089 Microgenomates group bacterium GW2011_GWF1_44_10 UP000034647 1618541 None 779 1 780 Microgenomates group bacterium GW2011_GWF2_47_9 UP000007947 1032480 MICPN 5190 115 5359 Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) UP000001876 564608 MICPC 10246 4 10269 Micromonas pusilla (strain CCMP1545) (Picoplanktonic green alga) UP000000349 649596 MPRVN 11 0 11 Micromonas pusilla reovirus (isolate Netherlands/2005) (MpRV) UP000002009 296587 MICSR 10071 44 10131 Micromonas sp. (strain RCC299 / NOUM17) (Picoplanktonic green alga) UP000001908 644283 MICAI 6152 52 6222 Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) UP000032254 47853 None 5544 47 5598 Micromonospora carbonacea UP000003448 1150864 None 6733 258 7019 Micromonospora lupini str. Lupac 08 UP000034330 1538294 None 5504 44 5549 Micromonospora sp. HK10 UP000008168 654919 MDBVW 53 0 53 Microplitis demolitor bracovirus (isolate Webb) (MdBV) UP000004095 313606 None 8225 23 8318 Microscilla marina ATCC 23134 UP000003947 864069 None 6860 58 6952 Microvirga lotononidis UP000028825 1549810 None 4551 44 4632 Microvirga sp. BSC39 UP000035489 1225564 None 5611 61 5674 Microvirga vignae UP000006639 696127 MIDMI 1171 10 1210 Midichloria mitochondrii (strain IricVA) UP000006678 652964 MILVL 7 0 7 Mirafiori lettuce virus (isolate Lettuce/Netherlands/LS301-O) (MiLV) (Mirafiori lettuce big-vein virus) UP000029748 1195365 MISV1 1 0 1 Mischivirus A (isolate Miniopterus schreibersii/China/MsPV-1/2010) (MscPV1) UP000029725 1485682 None 3256 0 3330 Mitosporidium daphniae UP000003671 500635 None 2514 44 2558 Mitsuokella multacida DSM 20544 UP000016614 1321781 None 2301 8 2309 Mitsuokella sp. oral taxon 131 str. W9106 UP000009131 764103 MIXOS 6725 0 11741 Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) UP000004367 1089455 None 3012 100 3112 Mobilicoccus pelagius NBRC 104925 UP000006742 548479 MOBCV 1887 17 1907 Mobiluncus curtisii (strain ATCC 43063 / DSM 2711 / V125) (Falcivibrio vaginalis) UP000003045 871571 None 2354 25 2380 Mobiluncus mulieris ATCC 35239 UP000006461 477641 None 5197 238 5446 Modestobacter marinus UP000029713 1522368 None 3813 34 3847 Modestobacter sp. KNN45-2b UP000003142 936375 None 1790 1 1801 Mogibacterium sp. CM50 UP000006826 12538 MOKV 5 2 7 Mokola virus (MOKV) UP000029408 1541959 None 1811 0 1815 Mollicutes bacterium HR1 UP000029254 1541960 None 2222 0 2222 Mollicutes bacterium HR2 UP000000869 10280 MCV1 163 0 163 Molluscum contagiosum virus subtype 1 (MOCV) (MCVI) UP000006625 928306 MLVMS 3 0 3 Moloney murine leukemia virus (isolate Shinnick) (MoMLV) UP000000741 554373 MONPE 13649 0 13649 Moniliophthora perniciosa (strain FA553 / isolate CP02) (Witches'-broom disease fungus) (Marasmius perniciosus) UP000017559 1381753 MONRO 17969 7 17979 Moniliophthora roreri (strain MCA 2997) (Cocoa frosty pod rot fungus) (Crinipellis roreri) UP000002280 13616 MONDO 21181 1064 22321 Monodelphis domestica (Gray short-tailed opossum) UP000001357 81824 MONBE 9188 0 9204 Monosiga brevicollis (Choanoflagellate) UP000003959 489825 None 7347 35 7445 Moorea producens 3L UP000050078 55779 None 3351 33 3636 Moorella glycerini UP000007053 264732 MOOTA 2442 9 2463 Moorella thermoacetica (strain ATCC 39073) UP000000504 903503 MOREP 401 4 406 Moranella endobia (strain PCIT) UP000035860 743974 None 1892 8 1900 Moraxella bovoculi 237 UP000000930 1236608 None 1881 0 1886 Moraxella catarrhalis BBH18 UP000023795 1230338 None 1820 2 1827 Moraxella macacae 0408225 UP000052088 1081054 None 7 0 7 Morelia spilota papillomavirus 1 UP000011834 1124991 None 3495 15 3526 Morganella morganii subsp. morganii KT UP000032438 80854 None 4084 135 4280 Moritella viscosa UP000030645 981085 None 26744 16 26965 Morus notabilis UP000029747 1554481 MOVA2 1 0 1 Mosavirus A2 (isolate Coracias garrulus/Hungary/SZAL6-MoV/2011) UP000006540 11759 MMTVC 5 0 5 Mouse mammary tumor virus (strain C3H) (MMTV) UP000002774 714943 None 6826 38 7006 Mucilaginibacter paludis DSM 18603 UP000027616 1433126 None 2813 3 3015 Mucinivorans hirudinis UP000017429 1379858 None 2084 7 2144 Mucispirillum schaedleri ASF457 UP000014254 1220926 MUCC1 12131 12 12227 Mucor circinelloides f. circinelloides (strain 1006PhL) (Mucormycosis agent) (Calyptromyces circinelloides) UP000031002 1348852 None 13367 783 14156 Mumia flava UP000002331 11171 MUMPM 8 0 8 Mumps virus (strain Miyahara vaccine) (MuV) UP000032726 516051 None 2870 12 2906 Muricauda lutaonensis UP000008908 886377 MURRD 3410 15 3432 Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) UP000008774 10367 MUHVS 15 0 15 Murid herpesvirus 1 (strain Smith) (MuHV-1) (Mouse cytomegalovirus) UP000007192 11142 CVMA5 11 0 11 Murine coronavirus (strain A59) (MHV-A59) (Murine hepatitis virus) UP000007019 648235 MUMIP 5 6 11 Murine minute virus (strain MVM prototype) (MVM) (Murine minute virus (strain MVM(p))) UP000000589 10090 MOUSE 22136 36638 59280 Mus musculus (Mouse) UP000012960 214687 MUSAM 36448 26 36519 Musa acuminata subsp. malaccensis (Wild banana) (Musa malaccensis) UP000011274 523909 MHVB 108 0 108 Musca hytrovirus(isolate Musca domestica/United States/Boucias/-) (MHV) UP000006824 650482 MBVLF 4 0 4 Mushroom bacilliform virus (isolate Australia/AUS LF-1) (MBV) UP000000715 9669 MUSPF 19864 194 20077 Mustela putorius furo (European domestic ferret) (Mustela furo) UP000007322 573729 MYCTT 9080 1 9099 Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) (Sporotrichum thermophile) UP000044736 36809 None 5006 169 20046 Mycobacterium abscessus UP000007137 561007 MYCA9 4914 26 4942 Mycobacterium abscessus (strain ATCC 19977 / DSM 44196 / CIP 104536 / JCM 13569 / NCTC 13031 / TMC 1543) UP000023351 1299321 None 5961 24 5996 Mycobacterium abscessus subsp. bolletii 1513 UP000044151 1765 MYCBI 3372 54 10759 Mycobacterium bovis UP000028870 258533 None 6237 34 6281 Mycobacterium cosmeticum UP000034819 81858 None 4840 25 4865 Mycobacterium elephantis UP000051677 1778 MYCGO 6370 37 6409 Mycobacterium gordonae UP000036334 29311 None 3714 29 3747 Mycobacterium haemophilum UP000006265 1122247 None 4938 21 4959 Mycobacterium hassiacum DSM 44199 UP000020425 1299327 None 7171 32 7295 Mycobacterium kansasii 732 UP000017786 557599 None 5803 40 5866 Mycobacterium kansasii ATCC 12478 UP000000806 272631 MYCLE 1601 2 1607 Mycobacterium leprae (strain TN) UP000032221 280871 None 5369 36 5407 Mycobacterium llatzerense UP000028867 1209984 None 7593 48 7675 Mycobacterium mageritense DSM 44476 UP000001190 216594 MYCMM 5409 9 5452 Mycobacterium marinum (strain ATCC BAA-535 / M) UP000018763 700508 None 4958 37 5018 Mycobacterium neoaurum VKM Ac-1815D UP000034150 1807 None 5806 24 7048 Mycobacterium obuense UP000000580 262316 MYCPA 4225 91 4349 Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) UP000000731 205880 None 109 0 109 Mycobacterium phage Barnyard UP000000697 1074309 None 82 0 82 Mycobacterium phage BigNuz UP000000730 205877 BPMBZ 225 0 225 Mycobacterium phage Bxz1 (Mycobacteriophage Bxz1) UP000008519 1056830 None 68 0 68 Mycobacterium phage Charlie UP000050720 205868 None 112 0 112 Mycobacterium phage Che8 UP000000967 205872 None 84 0 84 Mycobacterium phage Che9c UP000000968 205869 None 141 0 141 Mycobacterium phage Cjw1 UP000000964 205875 BPMCO 122 0 122 Mycobacterium phage Corndog (Mycobacteriophage Corndog) UP000000905 373407 None 64 0 64 Mycobacterium phage Halo UP000002123 31757 BPML5 90 0 90 Mycobacterium phage L5 (Mycobacteriophage L5) UP000000963 205879 BPMOM 237 0 237 Mycobacterium phage Omega (Mycobacteriophage Omega) UP000002539 373410 None 81 0 81 Mycobacterium phage PBI1 UP000001769 213236 None 100 0 100 Mycobacterium phage PG1 UP000008418 1034115 None 153 0 153 Mycobacterium phage Rey UP000002133 88870 BPMT4 92 0 92 Mycobacterium phage TM4 (Mycobacteriophage TM4) UP000000524 861047 None 123 0 123 Mycobacterium phage bron UP000005442 710685 MYCRN 6077 28 6147 Mycobacterium rhodesiae (strain NBB3) UP000009224 875328 MYCSD 4122 210 4346 Mycobacterium sinense (strain JDM601) UP000000757 246196 MYCS2 6437 165 16205 Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) UP000000638 189918 MYCSK 5869 24 5975 Mycobacterium sp. (strain KMS) UP000035237 1545728 None 5572 23 5599 Mycobacterium sp. EPa45 UP000010844 212767 None 6934 1 6939 Mycobacterium sp. JS623 UP000051127 1736457 None 5953 42 5995 Mycobacterium sp. Root135 UP000030340 1273687 None 6043 31 6084 Mycobacterium sp. VKM Ac-1817D UP000004915 1078020 None 4584 28 4613 Mycobacterium thermoresistibile ATCC 19527 UP000042994 1773 MYCTX 3922 128 45225 Mycobacterium tuberculosis UP000001584 83332 MYCTU 3987 9 5632 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) UP000020681 1299332 None 9027 6 9177 Mycobacterium ulcerans str. Harvey UP000009159 350058 MYCVP 5876 26 5979 Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) UP000023198 1299333 None 10110 13 10192 Mycobacterium xenopi 3993 UP000020964 1299334 None 10668 16 10769 Mycobacterium xenopi 4042 UP000003584 1150591 None 4233 39 4281 Mycobacterium xenopi RIVM700367 UP000007065 347257 MYCAP 695 31 726 Mycoplasma agalactiae (strain PG2) UP000005055 1034808 None 803 0 803 Mycoplasma anatis 1340 UP000008812 243272 MYCA5 630 1 631 Mycoplasma arthritidis (strain 158L3-1) UP000013220 1188235 None 677 0 677 Mycoplasma bovigenitalium 51080 UP000019229 743966 None 579 0 579 Mycoplasma bovoculi M165/69 UP000027088 2113 None 610 0 611 Mycoplasma californicum UP000031641 29554 None 456 25 484 Mycoplasma canadense UP000006229 1131455 None 641 1 642 Mycoplasma canis UFG4 UP000004978 1037410 None 613 1 614 Mycoplasma columbinum SF7 UP000001491 572263 MYCCR 684 11 696 Mycoplasma conjunctivae (strain ATCC 25834 / HRC/581 / NCTC 10147) UP000001845 512564 MYCCM 689 0 689 Mycoplasma crocodyli (strain ATCC 51981 / MP145) UP000010466 1246955 MYCC1 871 0 883 Mycoplasma cynos (strain C142) UP000006810 496833 MYCFP 889 2 893 Mycoplasma fermentans (strain ATCC 19989 / NBRC 14854 / NCTC 10117 / PG18) UP000032722 29556 None 569 2 571 Mycoplasma gallinaceum UP000001418 710127 MYCGA 753 8 764 Mycoplasma gallisepticum (strain R(low / passage 15 / clone 2)) UP000000807 243273 MYCGE 483 0 483 Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) UP000007952 859194 MYCHI 1524 0 1524 Mycoplasma haemofelis (strain Ohio2) UP000006502 1212765 MYCHA 922 1 925 Mycoplasma haemolamae (strain Purdue) UP000002631 347256 MYCHP 520 9 529 Mycoplasma hominis (strain ATCC 23114 / NBRC 14850 / NCTC 10111 / PG21) UP000000548 262719 MYCHJ 670 1 674 Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) UP000009399 1118964 None 750 1 753 Mycoplasma hyorhinis SK76 UP000027005 29559 None 595 2 2989 Mycoplasma hyosynoviae UP000003649 1048830 None 979 2 981 Mycoplasma iowae 695 UP000033750 1264554 None 498 7 505 Mycoplasma meleagridis ATCC 25294 UP000009072 267748 MYCMO 603 25 628 Mycoplasma mobile (strain ATCC 43663 / 163K / NCTC 11711) UP000011126 436113 None 372 0 379 Mycoplasma mycoides subsp. capri str. GM12 UP000001016 272632 MYCMS 878 100 1015 Mycoplasma mycoides subsp. mycoides SC (strain PG1) UP000018745 1415773 None 833 1 840 Mycoplasma ovis str. Michigan UP000017119 1403316 None 580 0 581 Mycoplasma parvum str. Indiana UP000002522 272633 MYCPE 1028 0 1036 Mycoplasma penetrans (strain HF-2) UP000000808 272634 MYCPN 687 0 688 Mycoplasma pneumoniae (strain ATCC 29342 / M129) UP000000528 272635 MYCPU 778 0 782 Mycoplasma pulmonis (strain UAB CTIP) UP000012984 1292033 None 663 3 667 Mycoplasma putrefaciens Mput9231 UP000018408 1262904 None 1276 5 1281 Mycoplasma sp. CAG:472 UP000018049 1262905 None 942 1 943 Mycoplasma sp. CAG:611 UP000018174 1262906 None 1345 4 1349 Mycoplasma sp. CAG:776 UP000018280 1262907 None 1402 5 1408 Mycoplasma sp. CAG:877 UP000018117 1262908 None 1368 1 1369 Mycoplasma sp. CAG:956 UP000007484 768700 MYCSL 844 0 844 Mycoplasma suis (strain Illinois) UP000000549 262723 MYCS5 679 0 681 Mycoplasma synoviae (strain 53) UP000009005 1197325 MYCWM 650 1 652 Mycoplasma wenyonii (strain Massachusetts) (Eperythrozoon wenyonii) UP000035528 1525752 None 905 54 1078 Mycoplasmataceae bacterium CE_OT135 UP000035310 1524337 None 783 32 1030 Mycoplasmataceae bacterium RC_NB112A UP000035282 1528105 None 1661 57 1839 Mycoplasmataceae bacterium RV_VA103A UP000010556 225400 MYODS 15440 6 15460 Myotis davidii (David's myotis) UP000001074 59463 MYOLU 19592 1059 20719 Myotis lucifugus (Little brown bat) UP000005785 929704 None 3672 15 3754 Myroides odoratus DSM 2801 UP000031842 480520 None 3523 11 3548 Myroides profundi UP000052063 1703407 None 2864 15 2879 Myxococcales bacterium SG8_38 UP000051258 1703408 None 3104 26 3130 Myxococcales bacterium SG8_38_1 UP000002402 246197 MYXXD 7213 101 7331 Myxococcus xanthus (strain DK 1622) UP000000867 31530 MYXVL 158 0 158 Myxoma virus (strain Lausanne) (MYXV) UP000006671 5762 NAEGR 15634 2 15711 Naegleria gruberi (Amoeba) UP000002218 479431 NAKMY 5081 42 5240 Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) (Microsphaera multipartita) UP000019335 72520 None 10412 407 10822 Nannochloropsis gaditana UP000009377 1093141 None 3277 51 3549 Nannochloropsis gaditana CCMP526 UP000000578 228908 NANEQ 535 1 536 Nanoarchaeum equitans (strain Kin4-M) UP000002358 7425 NASVI 17007 77 17153 Nasonia vitripennis (Parasitic wasp) UP000001683 457570 NATTJ 2832 15 2906 Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) UP000001879 547559 NATMM 4167 44 7685 Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) (Natronobacterium magadii) UP000010843 797303 NATP1 4094 44 7487 Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) UP000006507 406552 NATSJ 4260 36 4302 Natrinema sp. (strain J7-2) UP000010468 797304 NATGS 3593 31 6527 Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) UP000010878 694430 None 4115 38 4154 Natronococcus occultus SP4 UP000011867 268739 NATM8 2721 2 2749 Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) UP000002698 348780 NATPD 2763 2 2803 Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) (Halobacterium pharaonis) UP000001640 1064592 NAUCC 5565 0 5601 Naumovozyma castellii (strain ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630) (Yeast) (Saccharomyces castellii) UP000000689 1071378 NAUDC 5523 0 5548 Naumovozyma dairenensis (strain ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 / NRRL Y-12639) (Saccharomyces dairenensis) UP000000448 598659 NAUPA 1724 6 1730 Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) UP000005206 660122 NECH7 15705 4 15738 Nectria haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI) (Fusarium solani subsp. pisi) UP000018840 1403945 None 1675 4 1679 Negativicoccus succinicivorans DORA_17_25 UP000004105 888742 None 2964 2 2966 Neisseria bacilliformis ATCC BAA-1200 UP000031392 546263 None 2067 6 3361 Neisseria elongata subsp. glycolytica ATCC 29315 UP000000535 242231 NEIG1 2102 4 2155 Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) UP000000425 122586 NEIMB 2000 1 2062 Neisseria meningitidis serogroup B (strain MC58) UP000003612 435832 None 2021 5 2026 Neisseria mucosa C102 UP000003019 1032488 None 2528 2 2530 Neisseria shayeganii 871 UP000005946 665946 None 2544 2 2548 Neisseria sp. GT4A_CT1 UP000036027 1470200 None 2148 9 2159 Neisseria sp. KH1503 UP000002768 641149 None 2267 25 2298 Neisseria sp. oral taxon 014 str. F0314 UP000010457 1127694 None 2880 6 2886 Neisseria sp. oral taxon 020 str. F0370 UP000005336 1030841 None 2547 6 2553 Neisseria wadsworthii 9715 UP000004938 1051985 None 2228 5 2233 Neisseria weaveri LMG 5135 UP000002872 935791 NEMP3 2724 0 2726 Nematocida parisii (strain ERTm3) (Nematode killer fungus) UP000005622 944018 NEMS1 2769 0 2770 Nematocida sp. 1 (strain ERTm2 / ATCC PRA-371) (Nematode killer fungus) UP000001593 45351 NEMVE 24428 16 24785 Nematostella vectensis (Starlet sea anemone) UP000031344 1478175 None 2167 6 2173 Neochlamydia sp. EPS4 UP000008776 654906 NPVNC 89 0 89 Neodiprion lecontei nucleopolyhedrovirus (strain Canada) (NeleNPV) UP000050424 78410 None 12679 4 12685 Neonectria ditissima UP000028181 1028800 None 5956 190 6545 Neorhizobium galegae bv. orientalis str. HAMBI 540 UP000023755 1286528 None 867 1 868 Neorickettsia helminthoeca str. Oregon UP000001942 222891 NEOSM 932 0 932 Neorickettsia sennetsu (strain Miyayama) UP000006702 331117 NEOFI 10414 0 10416 Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (Aspergillus fischerianus) UP000002530 330879 ASPFU 9649 0 9653 Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (Aspergillus fumigatus) UP000036893 91492 None 9996 3 9999 Neosartorya udagawae UP000007494 572307 NEOCL 7108 3 11520 Neospora caninum (strain Liverpool) UP000030170 1497020 None 2698 25 2731 Neosynechococcus sphagnicola sy1 UP000002171 207954 NEPCE 3657 30 3688 Neptuniibacter caesariensis UP000048949 282199 None 2850 0 2872 Nereida ignava UP000022206 652017 None 2477 12 2493 Nesterenkonia sp. AN1 UP000001805 367110 NEUCR 9756 511 10296 Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) UP000008513 510952 NEUT9 11175 2 11186 Neurospora tetrasperma (strain FGSC 2509 / P0656) UP000002328 652953 NDVB1 8 0 8 Newcastle disease virus (strain Chicken/United States/B1/48) (NDV) UP000003586 929713 None 4097 13 4110 Niabella soli DSM 19437 UP000005438 700598 NIAKG 7133 38 7174 Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) UP000011300 1289473 CPRVZ 172 0 173 Nile crocodilepox virus (isolate Crocodylus niloticus/Zimbabwe/Ume/2001) (CRV) UP000038043 27835 NIPBR 20110 18 20128 Nippostrongylus brasiliensis (Rat hookworm) UP000008633 749222 NITSE 2071 5 2088 Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) UP000004622 1189611 None 4209 31 4241 Nitratireductor aquibiodomus RA22 UP000007374 1231190 None 4785 36 4824 Nitratireductor indicus C115 UP000006786 391937 None 4172 24 4197 Nitratireductor pacificus pht-3B UP000001118 387092 NITSB 1843 0 1843 Nitratiruptor sp. (strain SB155-2) UP000027318 267850 None 3075 17 3093 Nitrincola lacisaponensis UP000019464 1229521 None 4016 3 4020 Nitrincola nitratireducens UP000029924 1545442 None 2505 12 2564 Nitrincola sp. A-D6 UP000005551 1189621 None 3086 16 3103 Nitritalea halalkaliphila LW7 UP000001953 323097 NITHX 4228 15 4326 Nitrobacter hamburgensis (strain X14 / DSM 10229) UP000002531 323098 NITWN 2973 7 3122 Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) UP000003374 314278 None 3455 29 3503 Nitrococcus mobilis Nb-231 UP000004221 1129897 None 3922 47 3969 Nitrolancea hollandica Lb UP000001844 472759 NITHN 3719 51 3817 Nitrosococcus halophilus (strain Nc4) UP000006838 323261 NITOC 2978 17 3017 Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) UP000034156 44574 None 3034 30 3189 Nitrosomonas communis UP000001416 228410 NITEU 2362 13 2462 Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) UP000000501 261292 NITSI 3252 21 3372 Nitrosomonas sp. (strain Is79A3) UP000001629 153948 None 2826 15 2983 Nitrosomonas sp. AL212 UP000000792 436308 NITMS 1788 7 1795 Nitrosopumilus maritimus (strain SCM1) UP000008037 1237085 NITGG 3514 9 3565 Nitrososphaera gargensis (strain Ga9.2) UP000027093 926571 None 3113 4 3123 Nitrososphaera viennensis EN76 UP000002718 323848 NITMU 2723 9 2805 Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) UP000031969 58133 None 2901 29 2930 Nitrosospira sp. NpAV UP000011704 1266370 NITG3 2906 56 2962 Nitrospina gracilis (strain 3/211) UP000035948 1628278 None 1135 4 1140 Nitrospina sp. SCGC_AAA799_A02 UP000036407 1628279 None 1345 5 1353 Nitrospina sp. SCGC_AAA799_C22 UP000051394 1704023 None 5108 145 5253 Nitrospira bacterium SG8_3 UP000052010 1704024 None 2774 85 2859 Nitrospira bacterium SG8_35_1 UP000050997 1704025 None 2325 35 2361 Nitrospira bacterium SG8_35_4 UP000051169 1704026 None 1315 21 1336 Nitrospira bacterium SM23_35 UP000001660 330214 None 4198 65 4268 Nitrospira defluvii UP000018435 1003237 None 3340 17 3358 Nitrospirillum amazonense Y2 UP000017048 1110697 None 6164 295 6459 Nocardia asteroides NBRC 15531 UP000006304 1133849 None 8313 101 8414 Nocardia brasiliensis ATCC 700358 UP000008190 1127134 NOCCG 5323 150 5477 Nocardia cyriacigeorgica (strain GUH-2) UP000006820 247156 NOCFA 5919 22 5944 Nocardia farcinica (strain IFM 10152) UP000019150 1415166 None 7565 12 7578 Nocardia nova SH22a UP000019401 37332 None 7383 3 7386 Nocardia seriolae UP000037746 1519492 None 7821 55 7879 Nocardia sp. NRRL S-836 UP000033772 1844 None 5082 42 5125 Nocardioides luteus UP000030300 2045 NOCSI 5391 35 5427 Nocardioides simplex (Arthrobacter simplex) UP000000640 196162 NOCSJ 4853 35 4909 Nocardioides sp. (strain BAA-499 / JS614) UP000015971 110319 None 3862 31 3893 Nocardioides sp. CF8 UP000051939 1736439 None 5028 35 5063 Nocardioides sp. Root1257 UP000051274 1736475 None 4577 32 4609 Nocardioides sp. Root151 UP000051699 1736571 None 4749 31 4780 Nocardioides sp. Root614 UP000051414 1736600 None 4641 32 4673 Nocardioides sp. Root79 UP000051100 1736408 None 3573 24 3597 Nocardioides sp. Soil774 UP000050845 1736413 None 4016 31 4047 Nocardioides sp. Soil797 UP000051356 1736416 None 4064 22 4086 Nocardioides sp. Soil805 UP000003779 1205910 NOCAA 5465 35 5508 Nocardiopsis alba (strain ATCC BAA-2165 / BE74) UP000002219 446468 NOCDD 5454 43 5497 Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488) (Actinomadura dassonvillei) UP000037694 1519494 None 5216 37 5253 Nocardiopsis sp. NRRL B-16309 UP000008594 914672 NODAM 3 2 5 Nodamura virus (strain Mag115) (NoV) UP000019325 313624 None 5168 43 5295 Nodularia spumigena CCY9414 UP000001073 61853 NOMLE 18486 1248 19771 Nomascus leucogenys (Northern white-cheeked gibbon) (Hylobates leucogenys) UP000011173 592029 NONDD 3608 5 3618 Nonlabens dokdonensis (strain DSM 17205 / KCTC 12402 / DSW-6) (Donghaeana dokdonensis) UP000031760 1454201 None 2781 9 2790 Nonlabens marinus S1-08 UP000029221 319236 None 2945 6 2952 Nonlabens sediminis UP000000826 524364 NVN68 3 0 3 Norwalk virus (strain GI/Human/United States/Norwalk/1968) (Hu/NV/NV/1968/US) UP000016927 578461 NOSB1 3955 443 4468 Nosema bombycis (strain CQ1 / CVCC 102059) (Microsporidian parasite) (Pebrine of silkworm) UP000034350 40302 None 3200 0 3209 Nosema ceranae UP000009082 578460 NOSCE 2060 0 2060 Nosema ceranae (strain BRL01) (Microsporidian parasite) UP000001511 551115 NOSA0 3616 30 3651 Nostoc azollae (strain 0708) (Anabaena azollae (strain 0708)) UP000001191 63737 NOSP7 6508 65 6690 Nostoc punctiforme (strain ATCC 29133 / PCC 73102) UP000010378 28072 NOSS7 5334 64 5449 Nostoc sp. (strain ATCC 29411 / PCC 7524) UP000002483 103690 NOSS1 5988 82 6130 Nostoc sp. (strain PCC 7120 / UTEX 2576) UP000010381 317936 None 5129 56 5237 Nostoc sp. PCC 7107 UP000051303 1736487 None 5284 38 5322 Noviherbaspirillum sp. Root189 UP000009134 279238 NOVAD 3907 10 3937 Novosphingobium aromaticivorans (strain DSM 12444 / F199) UP000015527 1096930 None 4461 20 4566 Novosphingobium lindaniclasticum LE124 UP000031057 1348853 None 4248 22 4272 Novosphingobium malaysiense UP000004728 983920 None 3782 18 3801 Novosphingobium nitrogenifigens DSM 19370 UP000037880 1523413 None 3872 24 3898 Novosphingobium sp. AAP1 UP000037998 1523425 None 3620 13 3633 Novosphingobium sp. AAP83 UP000037906 1523427 None 3630 24 3654 Novosphingobium sp. AAP93 UP000007515 1144305 None 5189 23 5214 Novosphingobium sp. AP12 UP000050893 1735670 None 3375 12 3387 Novosphingobium sp. Leaf2 UP000032296 1609758 None 5138 42 5199 Novosphingobium sp. P6W UP000009242 702113 None 4604 20 4683 Novosphingobium sp. PP1Y UP000004732 555793 None 4282 19 4302 Novosphingobium sp. Rr 2-17 UP000037878 1684385 None 4569 25 4607 Novosphingobium sp. ST904 UP000016568 1219035 None 3866 139 4006 Novosphingobium tardaugens NBRC 16725 UP000000831 652108 NCBVS 2 0 2 Nudaurelia capensis beta virus (isolate Pine emperor moth/South Africa) (NbetaV) UP000029765 1557032 NYMVT 6 0 6 Nyamanini virus (isolate Tick/Thailand/39/1968) UP000051242 1655593 None 2137 3 2146 OM182 bacterium BACL3 MAG-120619-bin3 UP000000573 652110 OCSVU 3 0 3 Oat chlorotic stunt virus (isolate United Kingdom) (OCSV) UP000006746 1207063 None 3736 18 3754 Oceanibaculum indicum P24 UP000003257 391624 None 4124 23 4153 Oceanibulbus indolifex HEL-45 UP000006011 314254 None 3012 16 3029 Oceanicaulis sp. HTCC2633 UP000004318 252305 OCEBH 4171 22 4212 Oceanicola batsensis (strain ATCC BAA-863 / DSM 15984 / HTCC2597) UP000003635 314256 OCEGH 3771 20 3792 Oceanicola granulosus (strain ATCC BAA-861 / DSM 15982 / KCTC 12143 / HTCC2516) UP000007742 511062 OCESG 3164 26 3221 Oceanimonas sp. (strain GK1) UP000006765 1231392 None 2834 6 2840 Oceaniovalibus guishaninsula JLT2003 UP000008722 670487 OCEP5 2355 17 2373 Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) UP000000822 221109 OCEIH 3483 7 3493 Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) UP000040453 545501 None 4385 1 4426 Oceanobacillus oncorhynchi UP000028863 171693 None 3655 1 3666 Oceanobacillus picturae UP000002301 439375 OCHA4 4723 34 4799 Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) UP000005307 391626 None 4317 10 4492 Octadecabacter antarcticus 307 UP000017974 1263089 None 2799 13 2812 Odoribacter laneus CAG:561 UP000018100 1262909 None 3068 10 3078 Odoribacter sp. CAG:788 UP000006657 709991 ODOSD 3466 13 3497 Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 / NCTC 10825 / 1651/6) (Bacteroides splanchnicus) UP000030023 931074 None 1594 3 1598 Oenococcus alcoholitolerans UP000004959 1045004 None 1809 9 1825 Oenococcus kitaharae DSM 17330 UP000000774 203123 OENOB 1675 7 1691 Oenococcus oeni (strain ATCC BAA-331 / PSU-1) UP000051694 1736607 None 3590 28 3618 Oerskovia sp. Root918 UP000008673 871575 OGAPD 5338 0 5344 Ogataea parapolymorpha (strain DL-1 / ATCC 26012 / NRRL Y-7560) (Yeast) (Hansenula polymorpha) UP000001307 34765 OIKDI 17049 1 18955 Oikopleura dioica (Tunicate) UP000029708 1543381 None 2663 13 2679 Oleiagrimonas soli UP000032749 698738 None 3799 96 3919 Oleispira antarctica RB-8 UP000029629 1401065 None 2113 5 2118 Oligella urethralis DNF00040 UP000007730 504832 OLICO 3605 19 3852 Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) UP000000412 650489 OLV2I 4 0 4 Olive latent virus 2 (isolate Italy) (OLV-2) UP000016638 1125712 None 2644 6 2650 Olsenella profusa F0195 UP000003446 661087 None 1889 9 1898 Olsenella sp. oral taxon 809 str. F0356 UP000000333 633147 OLSUV 1738 1 1739 Olsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 / VPI D76D-27C) (Lactobacillus uli) UP000050824 1703776 None 1770 117 1888 Omnitrophica WOR_2 bacterium SM23_29 UP000051899 1703777 None 2273 238 2514 Omnitrophica WOR_2 bacterium SM23_72 UP000024404 6282 ONCVO 12994 0 13031 Onchocerca volvulus UP000002523 262768 ONYPE 621 109 759 Onion yellows phytoplasma (strain OY-M) UP000037510 104452 None 16804 10 16912 Operophtera brumata (winter moth) UP000019374 911162 OPHSC 6968 0 6972 Ophiocordyceps sinensis (strain Co18 / CGMCC 3.14243) (Yarsagumba caterpillar fungus) (Hirsutella sinensis) UP000037136 268505 None 7815 0 7821 Ophiocordyceps unilateralis UP000018936 8665 OPHHA 15533 2854 18392 Ophiophagus hannah (King cobra) (Naja hannah) UP000016923 1262450 OPHP1 8877 1 8884 Ophiostoma piceae (strain UAMH 11346) (Sap stain fungus) UP000003813 794903 None 5976 35 6071 Opitutaceae bacterium TAV5 UP000007013 452637 OPITP 4561 27 4612 Opitutus terrae (strain DSM 11246 / PB90-1) UP000031056 1354746 None 1810 0 1820 Ordospora colligata OC4 UP000005207 8128 ORENI 21410 5346 26787 Oreochromis niloticus (Nile tilapia) (Tilapia nilotica) UP000000870 647330 ORFSA 129 0 129 Orf virus (strain Goat/Texas/SA00/2000) (OV-SA00) (Orf virus-San Angelo 2000) UP000018461 796943 None 2115 12 2128 Oribacterium parvum ACB1 UP000004121 585501 None 2604 34 2638 Oribacterium sinus F0268 UP000004602 608534 None 2901 35 2946 Oribacterium sp. oral taxon 078 str. F0262 UP000033616 1359168 None 1066 1 1075 Orientia chuto str. Fuller UP000001565 357244 ORITB 836 130 1182 Orientia tsutsugamushi (strain Boryong) (Rickettsia tsutsugamushi) UP000033769 1359184 None 2702 2 2940 Orientia tsutsugamushi str. Gilliam UP000033454 1359174 None 864 0 917 Orientia tsutsugamushi str. Sido UP000033364 682184 None 3656 37 4151 Orientia tsutsugamushi str. UT76 UP000050417 1134406 None 3320 24 3347 Ornatilinea apprima UP000006051 867902 ORNRL 2138 0 2267 Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) UP000002279 9258 ORNAN 21122 2431 23605 Ornithorhynchus anatinus (Duckbill platypus) UP000051574 1629725 None 8817 3 8822 Oryctes borbonicus UP000011785 1046081 ORNVM 138 0 138 Oryctes rhinoceros nudivirus (isolate Oryctes rhinoceros/Malaysia/Ma07/2007) (OrNV) UP000001811 9986 RABIT 19208 2063 21367 Oryctolagus cuniculus (Rabbit) UP000026960 65489 None 34323 5889 40442 Oryza barthii UP000006038 4533 ORYBR 31989 0 32037 Oryza brachyantha UP000007306 4538 ORYGL 31791 16 33164 Oryza glaberrima (African rice) UP000026961 40148 None 35624 9101 44798 Oryza glumipatula UP000026962 4537 ORYPU 31290 7138 38902 Oryza punctata (Red rice) UP000008022 4529 ORYRU 37085 8507 45617 Oryza rufipogon (Brownbeard rice) (Asian wild rice) UP000007085 654933 OSEVJ 1 0 1 Oryza sativa endornavirus (isolate Japan/1995) (OsEV) UP000007015 39946 ORYSI 37324 68 37627 Oryza sativa subsp. indica (Rice) UP000000763 39947 ORYSJ 61075 2138 74422 Oryza sativa subsp. japonica (Rice) UP000001038 8090 ORYLA 19607 5039 24711 Oryzias latipes (Japanese rice fish) (Japanese killifish) UP000010367 56110 None 5714 41 5796 Oscillatoria acuminata PCC 6304 UP000010478 179408 None 6234 42 6360 Oscillatoria nigro-viridis PCC 7112 UP000001332 864702 None 4625 48 4780 Oscillatoriales cyanobacterium JSC-12 UP000014108 1235797 None 4194 15 4259 Oscillibacter sp. 1-3 UP000017942 1262910 None 2134 14 2148 Oscillibacter sp. CAG:155 UP000018113 1262911 None 1814 9 1823 Oscillibacter sp. CAG:241 UP000016601 1226323 None 4284 9 4293 Oscillibacter sp. KLE 1745 UP000005219 693746 OSCVS 4489 104 4723 Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) UP000029746 1554480 OSCV1 1 0 1 Oscivirus A1 (isolate Oriental magpie robin/Hong Kong/10717/2010) UP000014822 1330036 None 4366 17 4420 Osedax symbiont Rs1 UP000014830 1330035 None 4500 23 4523 Osedax symbiont Rs2 UP000007021 654903 OSHVF 116 0 116 Ostreid herpesvirus 1 (isolate France) (OsHV-1) (Pacific oyster herpesvirus) UP000001568 436017 OSTLU 7403 0 7603 Ostreococcus lucimarinus (strain CCE9901) UP000009170 70448 OSTTA 7743 2 7767 Ostreococcus tauri UP000005225 30611 OTOGA 19394 537 20001 Otolemur garnettii (Small-eared galago) (Garnett's greater bushbaby) UP000001103 652838 OUMVV 3 0 3 Ourmia melon virus (isolate Melon/Iran/VE9) (OuMV) UP000008089 114430 ADEO7 30 0 30 Ovine adenovirus D serotype 7 (isolate OAV287) (OAdV-7) (Ovine adenovirus 7) UP000002356 9940 SHEEP 20784 2373 23239 Ovis aries (Sheep) UP000052085 634772 None 7 0 7 Ovis aries papillomavirus 3 UP000005631 926562 OWEHD 3463 8 3485 Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) UP000005089 556269 None 2046 30 2076 Oxalobacter formigenes OXCC13 UP000004494 937450 None 4001 18 4019 Oxalobacteraceae bacterium IMCC9480 UP000050326 36849 None 4273 0 4276 Oxobacter pfennigii UP000006077 1172189 None 23558 1 24578 Oxytricha trifallax UP000006321 1206781 None 6280 228 6605 Paenibacillus alvei DSM 29 UP000032633 1126833 None 4659 64 4728 Paenibacillus beijingensis UP000005387 717606 None 4759 44 4824 Paenibacillus curdlanolyticus YK9 UP000003900 1131935 None 5602 58 5660 Paenibacillus dendritiformis C454 UP000029431 697284 None 3690 3 3928 Paenibacillus larvae subsp. larvae DSM 25430 UP000029278 44252 PAEMA 6354 197 6561 Paenibacillus macerans (Bacillus macerans) UP000007523 1116391 None 6966 52 7057 Paenibacillus mucilaginosus 3016 UP000019364 1236976 None 4831 43 4874 Paenibacillus pini JCM 16418 UP000006868 886882 PAEPS 5300 77 5387 Paenibacillus polymyxa (strain SC2) (Bacillus polymyxa) UP000029453 1212764 None 3829 15 3855 Paenibacillus popilliae ATCC 14706 UP000033163 1073571 None 6625 13 6705 Paenibacillus riograndensis SBR5 UP000019772 1268072 None 4724 52 4788 Paenibacillus sabinae T27 UP000002510 324057 PAESJ 6148 62 6213 Paenibacillus sp. (strain JDR-2) UP000036611 665792 None 4313 38 4367 Paenibacillus sp. D9 UP000034827 1642570 None 4636 38 4873 Paenibacillus sp. DMB20 UP000029519 1536775 None 5326 57 5383 Paenibacillus sp. FSL H7-0737 UP000003445 944559 None 5804 188 5992 Paenibacillus sp. HGF7 UP000032320 1566358 None 4539 49 4606 Paenibacillus sp. IHBB 10380 UP000018028 1236974 None 6042 38 6080 Paenibacillus sp. JCM 10914 UP000051722 1736234 None 6333 66 6400 Paenibacillus sp. Leaf72 UP000030061 1395587 None 6099 64 6163 Paenibacillus sp. MAEPY2 UP000028123 1501230 None 6394 61 6455 Paenibacillus sp. MSt1 UP000030851 1472719 None 6608 0 6608 Paenibacillus sp. P1XP2 UP000051180 1736388 None 5516 63 5580 Paenibacillus sp. Soil522 UP000051252 1736398 None 6771 57 6828 Paenibacillus sp. Soil750 UP000051948 1736411 None 6363 66 6429 Paenibacillus sp. Soil787 UP000028160 1499968 None 5180 46 5226 Paenibacillus sp. TCA20 UP000031967 1590651 None 5002 44 5051 Paenibacillus sp. VKM B-2647 UP000003981 621372 None 4327 133 4460 Paenibacillus sp. oral taxon 786 str. D14 UP000029507 169760 None 4374 43 4464 Paenibacillus stellifer UP000029734 268407 None 4783 38 4891 Paenibacillus wynnii UP000028824 1105367 None 2766 15 2781 Paenirhodobacter enshiensis UP000014412 1078085 None 3424 21 3449 Paenisporosarcina sp. HGH0030 UP000008718 694427 PALPW 3010 10 3020 Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) UP000002277 9598 PANTR 18656 1501 20269 Pan troglodytes (Chimpanzee) UP000018548 1380774 None 4724 50 4781 Pandoraea sp. RB-44 UP000036700 445709 None 3911 52 3984 Pandoraea thiooxydans UP000001665 652599 PMVK 5 0 5 Panicum mosaic virus (strain United States/Kansas 109S) (PMV) UP000001702 706191 PANAM 3711 530 4241 Pantoea ananatis (strain LMG 20103) UP000030307 1484158 None 3902 20 3956 Pantoea sp. PSNIH1 UP000030310 1484157 None 4303 26 4378 Pantoea sp. PSNIH2 UP000028761 9555 PAPAN 19139 1793 20992 Papio anubis (Olive baboon) UP000000566 435591 PARD8 3820 10 3849 Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) UP000014140 1235789 None 5564 10 5647 Parabacteroides goldsteinii dnLKV18 UP000018407 1263094 None 2960 4 2964 Parabacteroides merdae CAG:48 UP000018199 1262913 None 2820 3 2823 Parabacteroides sp. CAG:409 UP000000495 765952 PARAV 2779 5 2788 Parachlamydia acanthamoebae (strain UV7) UP000001628 502780 PARBD 8399 0 8407 Paracoccidioides brasiliensis (strain Pb18) UP000002059 502779 PARBA 8811 0 8826 Paracoccidioides lutzii (strain ATCC MYA-826 / Pb01) (Paracoccidioides brasiliensis) UP000015480 1367847 None 4437 25 4528 Paracoccus aminophilus JCM 7686 UP000000361 318586 PARDP 4995 24 5078 Paracoccus denitrificans (strain Pd 1222) UP000029846 376733 None 3435 22 3471 Paracoccus halophilus UP000032743 1603292 None 3450 13 3491 Paracoccus sp. 361 UP000029917 690417 None 2808 11 2822 Paracoccus sphaerophysae UP000006327 493475 None 5040 290 5333 Paraglaciecola arctica BSs20135 UP000011864 1129794 None 5552 49 5618 Paraglaciecola psychrophila 170 UP000000862 10506 PBCV1 792 2 794 Paramecium bursaria Chlorella virus 1 (PBCV-1) UP000000600 5888 PARTE 39457 4 39753 Paramecium tetraurelia UP000017958 1263095 None 2838 9 2847 Paraprevotella clara CAG:116 UP000033220 1150469 None 3254 21 3286 Pararhodospirillum photometricum DSM 122 UP000004946 864564 None 1673 6 2835 Parascardovia denticolens DSM 10105 = JCM 12538 UP000038045 131310 PARTI 14867 25 14892 Parastrongyloides trichosuri (Possum-specific nematode worm) UP000018034 1263099 None 2223 5 2228 Parasutterella excrementihominis CAG:233 UP000037027 1659195 None 927 0 927 Parcubacteria bacterium C7867-001 UP000036964 1659197 None 549 0 549 Parcubacteria bacterium C7867-003 UP000036787 1659198 None 851 0 852 Parcubacteria bacterium C7867-004 UP000037202 1659199 None 604 0 604 Parcubacteria bacterium C7867-005 UP000037457 1659200 None 685 0 685 Parcubacteria bacterium C7867-006 UP000037534 1659201 None 776 0 776 Parcubacteria bacterium C7867-007 UP000051392 1703764 None 714 5 719 Parcubacteria bacterium DG_72 UP000051540 1703765 None 547 1 548 Parcubacteria bacterium DG_74_1 UP000051668 1703766 None 1218 54 1272 Parcubacteria bacterium DG_74_2 UP000051833 1703767 None 514 3 517 Parcubacteria bacterium DG_74_3 UP000018547 1394712 None 686 0 686 Parcubacteria bacterium RAAC4_OD1_1 UP000051503 1703768 None 999 3 1002 Parcubacteria bacterium SG8_24 UP000034198 1618781 None 292 0 292 Parcubacteria group bacterium GW2011_GWA1_33_6 UP000034612 1618782 None 898 6 904 Parcubacteria group bacterium GW2011_GWA1_36_12 UP000034610 1618783 None 836 7 843 Parcubacteria group bacterium GW2011_GWA1_38_7 UP000034180 1618788 None 746 1 747 Parcubacteria group bacterium GW2011_GWA1_44_13 UP000033978 1618791 None 823 14 837 Parcubacteria group bacterium GW2011_GWA1_47_10 UP000034505 1618792 None 683 13 696 Parcubacteria group bacterium GW2011_GWA1_47_11 UP000034272 1618793 None 890 1 891 Parcubacteria group bacterium GW2011_GWA1_47_8 UP000034426 1618795 None 631 16 647 Parcubacteria group bacterium GW2011_GWA1_48_11b UP000033954 1618796 None 325 1 326 Parcubacteria group bacterium GW2011_GWA1_49_11 UP000034066 1618797 None 715 1 716 Parcubacteria group bacterium GW2011_GWA1_49_26 UP000034143 1618798 None 433 0 433 Parcubacteria group bacterium GW2011_GWA1_50_14 UP000034423 1618799 None 793 4 797 Parcubacteria group bacterium GW2011_GWA1_51_12 UP000034721 1618800 None 550 13 563 Parcubacteria group bacterium GW2011_GWA1_53_13 UP000034801 1618803 None 759 0 759 Parcubacteria group bacterium GW2011_GWA1_56_13 UP000033896 1618804 None 751 3 754 Parcubacteria group bacterium GW2011_GWA1_59_11 UP000034313 1618805 None 237 0 237 Parcubacteria group bacterium GW2011_GWA1_60_11 UP000034745 1618789 None 492 1 493 Parcubacteria group bacterium GW2011_GWA1_Parcubacteria_45_10 UP000034567 1618806 None 526 0 526 Parcubacteria group bacterium GW2011_GWA2_31_28 UP000034294 1618807 None 672 1 673 Parcubacteria group bacterium GW2011_GWA2_33_14 UP000034083 1618808 None 859 4 863 Parcubacteria group bacterium GW2011_GWA2_36_10 UP000033884 1618810 None 832 0 832 Parcubacteria group bacterium GW2011_GWA2_37_10 UP000034626 1618811 None 1020 0 1020 Parcubacteria group bacterium GW2011_GWA2_38_13 UP000034916 1618780 None 1015 7 1022 Parcubacteria group bacterium GW2011_GWA2_38_13b UP000034946 1618813 None 559 2 561 Parcubacteria group bacterium GW2011_GWA2_39_18 UP000034892 1618814 None 685 0 685 Parcubacteria group bacterium GW2011_GWA2_40_14 UP000034534 1618816 None 1219 2 1221 Parcubacteria group bacterium GW2011_GWA2_40_23 UP000034813 1618817 None 840 0 840 Parcubacteria group bacterium GW2011_GWA2_40_37 UP000033821 1618819 None 544 1 545 Parcubacteria group bacterium GW2011_GWA2_42_11 UP000034025 1618820 None 1244 2 1246 Parcubacteria group bacterium GW2011_GWA2_42_14 UP000034342 1618821 None 603 3 606 Parcubacteria group bacterium GW2011_GWA2_42_18 UP000034375 1618822 None 519 5 524 Parcubacteria group bacterium GW2011_GWA2_42_28 UP000034714 1618825 None 972 0 972 Parcubacteria group bacterium GW2011_GWA2_43_11 UP000034869 1618826 None 881 2 883 Parcubacteria group bacterium GW2011_GWA2_43_13 UP000033819 1618827 None 1232 6 1239 Parcubacteria group bacterium GW2011_GWA2_43_17 UP000034814 1618828 None 859 1 862 Parcubacteria group bacterium GW2011_GWA2_43_9b UP000034439 1618829 None 811 2 813 Parcubacteria group bacterium GW2011_GWA2_44_12 UP000034666 1618830 None 899 1 901 Parcubacteria group bacterium GW2011_GWA2_44_13 UP000034891 1618831 None 273 4 277 Parcubacteria group bacterium GW2011_GWA2_44_15 UP000034475 1618832 None 1228 2 1230 Parcubacteria group bacterium GW2011_GWA2_45_14 UP000034700 1618833 None 469 0 469 Parcubacteria group bacterium GW2011_GWA2_45_15 UP000033829 1618834 None 769 0 769 Parcubacteria group bacterium GW2011_GWA2_45_30 UP000033973 1618835 None 602 1 603 Parcubacteria group bacterium GW2011_GWA2_46_10 UP000033816 1618836 None 341 4 345 Parcubacteria group bacterium GW2011_GWA2_46_39 UP000034469 1618837 None 458 1 459 Parcubacteria group bacterium GW2011_GWA2_46_7 UP000034480 1618838 None 1035 1 1036 Parcubacteria group bacterium GW2011_GWA2_46_9 UP000034777 1618839 None 1435 6 1441 Parcubacteria group bacterium GW2011_GWA2_47_10 UP000033912 1618840 None 878 0 878 Parcubacteria group bacterium GW2011_GWA2_47_10b UP000034388 1618841 None 763 7 770 Parcubacteria group bacterium GW2011_GWA2_47_12 UP000034117 1618842 None 891 1 892 Parcubacteria group bacterium GW2011_GWA2_47_16 UP000034472 1618843 None 518 1 519 Parcubacteria group bacterium GW2011_GWA2_47_21 UP000034132 1618845 None 1096 1 1097 Parcubacteria group bacterium GW2011_GWA2_47_64 UP000034546 1618846 None 992 3 995 Parcubacteria group bacterium GW2011_GWA2_47_7 UP000034914 1618847 None 736 2 738 Parcubacteria group bacterium GW2011_GWA2_47_8 UP000034130 1618848 None 529 1 530 Parcubacteria group bacterium GW2011_GWA2_47_8b UP000034427 1618849 None 808 7 815 Parcubacteria group bacterium GW2011_GWA2_47_9 UP000034608 1618851 None 606 9 615 Parcubacteria group bacterium GW2011_GWA2_49_16 UP000034328 1618852 None 983 0 983 Parcubacteria group bacterium GW2011_GWA2_49_9 UP000034043 1618854 None 439 0 439 Parcubacteria group bacterium GW2011_GWA2_50_10b UP000034456 1618855 None 796 0 796 Parcubacteria group bacterium GW2011_GWA2_51_10 UP000034905 1618856 None 589 0 589 Parcubacteria group bacterium GW2011_GWA2_51_12 UP000033838 1618857 None 470 0 470 Parcubacteria group bacterium GW2011_GWA2_52_8 UP000033913 1618858 None 505 7 512 Parcubacteria group bacterium GW2011_GWA2_53_21 UP000034417 1618859 None 420 2 422 Parcubacteria group bacterium GW2011_GWA2_56_21 UP000033964 1618860 None 406 0 406 Parcubacteria group bacterium GW2011_GWA2_56_7 UP000034250 1618862 None 648 1 649 Parcubacteria group bacterium GW2011_GWB1_36_5 UP000034935 1618865 None 958 5 963 Parcubacteria group bacterium GW2011_GWB1_40_14 UP000034734 1618867 None 500 3 503 Parcubacteria group bacterium GW2011_GWB1_41_4 UP000034062 1618869 None 663 4 667 Parcubacteria group bacterium GW2011_GWB1_41_6 UP000034919 1618872 None 612 9 621 Parcubacteria group bacterium GW2011_GWB1_43_6 UP000033953 1618874 None 661 3 664 Parcubacteria group bacterium GW2011_GWB1_43_8 UP000033936 1618876 None 653 10 663 Parcubacteria group bacterium GW2011_GWB1_44_7 UP000034347 1618878 None 356 3 359 Parcubacteria group bacterium GW2011_GWB1_45_7 UP000034512 1618879 None 619 3 622 Parcubacteria group bacterium GW2011_GWB1_45_9 UP000034815 1618881 None 241 1 242 Parcubacteria group bacterium GW2011_GWB1_48_6 UP000033875 1618883 None 441 1 442 Parcubacteria group bacterium GW2011_GWB1_49_7 UP000034442 1618884 None 577 1 578 Parcubacteria group bacterium GW2011_GWB1_50_9 UP000034158 1618887 None 602 0 602 Parcubacteria group bacterium GW2011_GWB1_55_9 UP000034284 1618888 None 897 0 898 Parcubacteria group bacterium GW2011_GWB1_56_8 UP000034499 1618891 None 536 1 537 Parcubacteria group bacterium GW2011_GWC1_34_10 UP000034759 1618892 None 629 0 629 Parcubacteria group bacterium GW2011_GWC1_35_21 UP000034730 1618893 None 447 0 447 Parcubacteria group bacterium GW2011_GWC1_35_8 UP000034191 1618894 None 1009 0 1009 Parcubacteria group bacterium GW2011_GWC1_36_108 UP000034912 1618895 None 642 3 645 Parcubacteria group bacterium GW2011_GWC1_36_9 UP000034269 1618896 None 698 1 699 Parcubacteria group bacterium GW2011_GWC1_38_17 UP000034773 1618897 None 932 1 933 Parcubacteria group bacterium GW2011_GWC1_38_22 UP000034446 1618898 None 599 0 599 Parcubacteria group bacterium GW2011_GWC1_38_6 UP000034254 1618900 None 650 1 651 Parcubacteria group bacterium GW2011_GWC1_39_29 UP000034632 1618901 None 426 0 426 Parcubacteria group bacterium GW2011_GWC1_39_8 UP000033988 1618902 None 749 1 750 Parcubacteria group bacterium GW2011_GWC1_40_11 UP000034686 1618903 None 638 1 639 Parcubacteria group bacterium GW2011_GWC1_40_13 UP000033909 1618904 None 533 1 534 Parcubacteria group bacterium GW2011_GWC1_41_7 UP000034518 1618905 None 742 0 742 Parcubacteria group bacterium GW2011_GWC1_42_11 UP000034628 1618907 None 690 8 698 Parcubacteria group bacterium GW2011_GWC1_43_11 UP000034526 1618908 None 741 3 744 Parcubacteria group bacterium GW2011_GWC1_43_11b UP000034170 1618909 None 792 1 793 Parcubacteria group bacterium GW2011_GWC1_43_12 UP000034161 1618910 None 845 5 850 Parcubacteria group bacterium GW2011_GWC1_43_30 UP000034639 1618914 None 815 0 815 Parcubacteria group bacterium GW2011_GWC1_45_13 UP000034654 1618915 None 953 1 955 Parcubacteria group bacterium GW2011_GWC1_45_14 UP000034008 1618916 None 613 2 615 Parcubacteria group bacterium GW2011_GWC1_45_9 UP000034155 1618918 None 1105 3 1108 Parcubacteria group bacterium GW2011_GWC2_32_10 UP000034580 1618920 None 860 3 863 Parcubacteria group bacterium GW2011_GWC2_38_7 UP000034836 1618921 None 680 2 682 Parcubacteria group bacterium GW2011_GWC2_39_11 UP000034205 1618924 None 822 2 824 Parcubacteria group bacterium GW2011_GWC2_40_31 UP000034173 1618926 None 960 2 962 Parcubacteria group bacterium GW2011_GWC2_42_12 UP000034796 1618928 None 485 0 485 Parcubacteria group bacterium GW2011_GWC2_42_6 UP000034811 1618929 None 1064 1 1065 Parcubacteria group bacterium GW2011_GWC2_44_17 UP000034136 1618930 None 1213 3 1216 Parcubacteria group bacterium GW2011_GWC2_44_22 UP000034703 1618932 None 870 1 871 Parcubacteria group bacterium GW2011_GWC2_45_7 UP000034059 1618934 None 1280 8 1288 Parcubacteria group bacterium GW2011_GWC2_49_9 UP000034843 1618941 None 901 2 903 Parcubacteria group bacterium GW2011_GWD2_38_11 UP000033822 1618944 None 1087 1 1088 Parcubacteria group bacterium GW2011_GWD2_42_14 UP000034358 1618945 None 800 2 802 Parcubacteria group bacterium GW2011_GWD2_43_10 UP000034131 1618946 None 862 0 862 Parcubacteria group bacterium GW2011_GWE1_40_20 UP000034675 1618949 None 613 2 615 Parcubacteria group bacterium GW2011_GWE2_38_18 UP000034258 1618960 None 915 4 919 Parcubacteria group bacterium GW2011_GWF2_38_76 UP000034262 1618961 None 732 1 733 Parcubacteria group bacterium GW2011_GWF2_38_8 UP000034319 1618962 None 440 0 440 Parcubacteria group bacterium GW2011_GWF2_39_13b UP000033976 1618966 None 843 14 857 Parcubacteria group bacterium GW2011_GWF2_42_7 UP000034303 1618967 None 537 2 539 Parcubacteria group bacterium GW2011_GWF2_43_11 UP000034038 1618970 None 415 5 420 Parcubacteria group bacterium GW2011_GWF2_44_7 UP000034896 1618971 None 577 6 583 Parcubacteria group bacterium GW2011_GWF2_44_8 UP000034602 1618975 None 1115 6 1121 Parcubacteria group bacterium GW2011_GWF2_50_9 UP000034153 1618976 None 669 0 669 Parcubacteria group bacterium GW2011_GWF2_52_12 UP000007103 33762 PYFV1 1 0 1 Parsnip yellow fleck virus (isolate P-121) (PYFV) UP000006377 402881 PARL1 3569 11 3636 Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) UP000031386 33033 None 1411 7 1419 Parvimonas micra UP000001302 314260 PARBH 2681 6 2687 Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) UP000029745 1554498 PASI1 1 0 1 Pasivirus A1 isolate (isolate Swine/France/ Pasivirus 1/2010) UP000029744 1554479 PASVA 1 0 1 Passerivirus A1 (isolate Turdus pallidus/Hong Kong/00356/2007) UP000006457 1095749 None 2175 2 2178 Pasteurella bettyae CCUG 2042 UP000000809 272843 PASMU 2010 5 2015 Pasteurella multocida (strain Pm70) UP000002751 1032868 None 3041 176 3217 Pasteurella multocida subsp. multocida str. Anand1_buffalo UP000002749 1032867 None 3341 249 3590 Pasteurella multocida subsp. multocida str. Anand1_cattle UP000005143 1097667 None 4342 30 4372 Patulibacter medicamentivorans UP000000519 693989 PEMVW 5 0 5 Pea enation mosaic virus-1 (strain WSG) (PEMV-1) UP000001668 652837 PCV87 7 0 7 Peanut clump virus (isolate 87/TGTA2) (PCV) UP000007966 218491 PECAS 4434 25 4472 Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) (Erwinia carotovora subsp. atroseptica) UP000009046 121224 PEDHC 10754 9 10775 Pediculus humanus subsp. corporis (Body louse) UP000004470 862514 None 1836 48 1884 Pediococcus acidilactici DSM 20284 UP000051249 480391 None 1732 14 1746 Pediococcus argentinicus UP000051568 319652 None 1903 13 1916 Pediococcus cellicola UP000005444 701521 PEDCP 1837 40 1881 Pediococcus claussenii (strain ATCC BAA-344 / DSM 14800 / JCM 18046 / KCTC 3811 / P06) UP000033638 1448143 None 1976 20 1996 Pediococcus damnosus LMG 28219 UP000050978 54062 None 3450 334 3784 Pediococcus parvulus UP000000773 278197 PEDPA 1744 11 1755 Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) UP000028007 1358423 None 3817 19 3836 Pedobacter antarcticus 4BY UP000031461 1122941 None 3310 1 3311 Pedobacter glucosidilyticus UP000000852 485917 PEDHD 4232 17 4252 Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) UP000031246 1069985 None 4883 20 4903 Pedobacter kyungheensis UP000003664 391596 None 5055 42 5101 Pedobacter sp. BAL39 UP000036014 1663685 None 4039 15 4055 Pedobacter sp. BMA UP000050543 1740090 None 4244 17 4261 Pedobacter sp. Hv1 UP000051708 1736297 None 3894 15 3909 Pedobacter sp. Leaf194 UP000032049 1503925 None 4580 20 4601 Pedobacter sp. NL19 UP000019145 509635 None 5809 34 5849 Pedobacter sp. V48 UP000003688 320771 PEDPL 6463 29 6508 Pedosphaera parvula (strain Ellin514) UP000029757 1554494 PEGIA 1 0 1 Pegivirus A (isolate Saguinus labiatus/-/GBV-A-lab/1996) UP000006230 314265 PELBH 5380 40 5452 Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) UP000009181 1002672 PELSM 1445 2 1447 Pelagibacter sp. (strain IMCC9063) UP000002528 335992 PELUB 1352 2 1354 Pelagibacter ubique (strain HTCC1062) UP000050912 1655618 None 997 8 1010 Pelagibacteraceae bacterium BACL20 MAG-120920-bin64 UP000051468 1655605 None 1127 2 1135 Pelagibacteraceae bacterium BACL5 MAG-120820-bin39 UP000008850 1082931 PELHB 3854 21 3881 Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) UP000000411 650488 PZSVT 4 0 4 Pelargonium zonate spot virus (isolate Tomato/Italy/1982) (PZSV) (Pelargonium zonate spot virus (isolate Tomato)) UP000018766 1414851 None 2114 7 2127 Pelistega indica UP000002534 338963 PELCD 3281 11 3304 Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) UP000006732 338966 PELPD 3656 38 3804 Pelobacter propionicus (strain DSM 2379) UP000002724 324925 PELPB 2671 14 2707 Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) UP000007267 13735 PELSI 18077 2432 20601 Pelodiscus sinensis (Chinese softshell turtle) (Trionyx sinensis) UP000051648 1736464 None 5082 21 5103 Pelomonas sp. Root1444 UP000004324 1149862 None 4633 57 4691 Pelosinus fermentans B4 UP000027983 484770 None 4692 62 4759 Pelosinus sp. UFO1 UP000006556 370438 PELTS 2430 454 2920 Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) UP000042958 104259 None 11422 513 11941 Penicillium brasilianum UP000006714 654932 PCVC 4 0 4 Penicillium chrysogenum virus (isolate Caston/2003) (PcV) UP000009882 1170229 PEND2 9101 0 9133 Penicillium digitatum (strain PHI26 / CECT 20796) (Green mold) UP000030143 27334 PENEN 11058 2 27039 Penicillium expansum (Blue mold rot fungus) UP000030104 40296 PENIT 9992 1 9996 Penicillium italicum (Blue mold) UP000037696 229535 None 12937 1 12944 Penicillium nordicum UP000019376 933388 PENO1 9976 1 9977 Penicillium oxalicum (strain 114-2 / CGMCC 5302) (Penicillium decumbens) UP000030686 1365484 PENRF 12293 22 12319 Penicillium roqueforti (strain FM164) UP000000724 500485 PENRW 12786 2 12808 Penicillium rubens (strain ATCC 28089 / DSM 1075 / NRRL 1951 / Wisconsin 54-1255) (Penicillium chrysogenum) UP000032492 60172 None 10375 0 10377 Penicillium solitum UP000052112 216371 None 2 0 2 Penicillium stoloniferum virus S UP000001978 272563 PEPD6 3751 11 6834 Peptoclostridium difficile (strain 630) (Clostridium difficile) UP000036486 1655638 None 2273 15 2294 Peptococcaceae bacterium 1109 UP000033503 1629714 None 4944 72 5037 Peptococcaceae bacterium BRH_c23 UP000033439 1629716 None 2895 22 2960 Peptococcaceae bacterium BRH_c4a UP000033446 1629717 None 3068 18 3111 Peptococcaceae bacterium BRH_c4b UP000033493 1629715 None 3423 17 3469 Peptococcaceae bacterium BRH_c8a UP000035957 999898 None 5053 2 5070 Peptococcaceae bacterium CEB3 UP000027084 1487582 None 2172 15 2209 Peptococcaceae bacterium SCADC1_2_3 UP000003280 862517 None 1960 27 1988 Peptoniphilus duerdenii ATCC BAA-1640 UP000003705 908338 None 1697 27 1724 Peptoniphilus harei ACS-146-V-Sch2b UP000003422 997350 None 2264 5 2269 Peptoniphilus indolicus ATCC 29427 UP000005711 596330 None 1558 30 1589 Peptoniphilus lacrimalis 315-B UP000029621 1401070 None 2956 280 3237 Peptoniphilus lacrimalis DNF00528 UP000032409 875453 None 1525 3 1541 Peptoniphilus sp. 1-1 UP000017105 1111134 None 1921 3 1929 Peptoniphilus sp. BV3C26 UP000003680 879308 None 2113 4 2157 Peptoniphilus sp. oral taxon 375 str. F0436 UP000004712 575609 None 1384 20 1404 Peptoniphilus sp. oral taxon 386 str. F0131 UP000006605 936556 None 2293 6 2308 Peptostreptococcaceae bacterium AS15 UP000005244 796941 None 2270 5 2277 Peptostreptococcaceae bacterium OBRC8 UP000016618 1321784 None 2321 4 2325 Peptostreptococcaceae bacterium oral taxon 113 str. W5053 UP000018261 1263100 None 1703 10 1713 Peptostreptococcus anaerobius CAG:621 UP000003244 596315 None 1576 24 1600 Peptostreptococcus stomatis DSM 17678 UP000029767 1559359 PRVF 5 0 5 Perch rhabdovirus (isolate Perch/France/PRV/1981) UP000006831 648333 PFDNG 7 0 7 Periplaneta fuliginosa densovirus (isolate Guo/2000) (PfDNV) UP000036983 1314962 None 4883 0 5252 Perkinsela sp. CCAP 1560/4 UP000007800 423536 PERM5 22957 157 23629 Perkinsus marinus (strain ATCC 50983 / TXsc) UP000001366 123214 PERMH 2042 6 2051 Persephonella marina (strain DSM 14350 / EX-H1) UP000030651 1229662 None 15410 2 15413 Pestalotiopsis fici W106-1 UP000002245 492094 PVCV1 1 0 1 Petunia vein clearing virus (isolate Shepherd) (PVCV) UP000002914 391619 PHAIB 3841 12 3875 Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) UP000050782 1712645 None 3861 3 3876 Phaeobacter sp. CECT 5382 UP000051870 1715693 None 4062 1 4065 Phaeobacter sp. CECT 7735 UP000029736 1524460 None 5042 22 5122 Phaeodactylibacter xiamenensis UP000000759 556484 PHATC 10439 26 10542 Phaeodactylum tricornutum (strain CCAP 1055/1) UP000001055 321614 PHANO 15993 5 16008 Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) (Glume blotch fungus) (Septoria nodorum) UP000004169 1150626 None 3684 87 3803 Phaeospirillum molischianum DSM 120 UP000008370 650164 PHACS 13867 0 13925 Phanerochaete carnosa (strain HHB-10118-sp) (White-rot fungus) (Peniophora carnosa) UP000014944 1262914 None 2219 9 2229 Phascolarctobacterium sp. CAG:207 UP000014925 1262915 None 1773 5 1778 Phascolarctobacterium sp. CAG:266 UP000004923 626939 None 2120 28 2150 Phascolarctobacterium succinatutens YIT 12067 UP000000226 3885 PHAVU 27995 2506 30579 Phaseolus vulgaris (Kidney bean) (French bean) UP000051150 1736442 None 4006 16 4022 Phenylobacterium sp. Root1277 UP000001868 450851 PHEZH 3784 54 3854 Phenylobacterium zucineum (strain HLK1) UP000038010 1664694 None 11845 3 11848 Phialophora attae UP000052091 706527 None 6 0 6 Phocoena phocoena papillomavirus 4 UP000008789 654916 PSPVP 8 0 8 Phocoena spinipinnis papillomavirus (isolate Burmeister's porpoise/Peru/PsPV1) (PsPV) UP000050465 1666911 None 4845 6 4863 Phormidesmis priestleyi Ana UP000050461 1666905 None 4150 6 4158 Phormidium sp. OSCR UP000036426 754436 None 4300 49 4353 Photobacterium aphoticum UP000003579 675817 None 3474 24 3528 Photobacterium damselae subsp. damselae CIP 102761 UP000032303 658445 None 4922 52 5006 Photobacterium gaetbulicola Gung47 UP000035909 320778 None 4628 65 4698 Photobacterium ganghwense UP000033633 265726 None 3925 43 4033 Photobacterium halotolerans UP000032448 56192 None 3700 36 5070 Photobacterium iliopiscarium UP000032479 553611 PHOLE 3809 45 4939 Photobacterium leiognathi UP000030675 1248232 None 4246 45 4296 Photobacterium leiognathi lrivu.4.1 UP000011134 1056511 None 4867 37 4904 Photobacterium marinum UP000000593 298386 PHOPR 5053 275 5478 Photobacterium profundum (strain SS9) UP000037287 680026 None 4037 33 4070 Photobacterium swingsii UP000002514 243265 PHOLL 4551 5 4680 Photorhabdus luminescens subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01) UP000051855 1736397 None 3537 19 3556 Phycicoccus sp. Soil748 UP000050906 1736414 None 3828 20 3848 Phycicoccus sp. Soil802 UP000007881 1142394 PHYMF 3215 54 3284 Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) UP000051853 1703409 None 3322 12 3334 Phycisphaerae bacterium SG8_4 UP000051901 1703411 None 2781 11 2792 Phycisphaerae bacterium SM23_30 UP000007283 1144343 None 4812 32 4845 Phyllobacterium sp. YR531 UP000006727 3218 PHYPA 34793 44 35187 Physcomitrella patens subsp. patens (Moss) UP000027080 134006 None 6361 0 6381 Phytomonas sp. isolate EM1 UP000006643 403677 PHYIT 17609 0 17797 Phytophthora infestans (strain T30-4) (Potato late blight fungus) UP000018817 761204 PHYPN 23002 3436 26555 Phytophthora parasitica (strain INRA-310) UP000018721 1317065 None 22966 3511 26668 Phytophthora parasitica P1569 UP000005238 164328 PHYRM 15349 0 15605 Phytophthora ramorum (Sudden oak death agent) UP000002640 1094619 PHYSP 25721 0 26489 Phytophthora sojae (strain P6497) UP000008323 59748 PHYAS 598 35 684 Phytoplasma australiense UP000002020 482235 PHYMT 438 10 482 Phytoplasma mali (strain AT) UP000029867 4909 PICKU 6870 3 7086 Pichia kudriavzevii (Yeast) (Issatchenkia orientalis) UP000005222 559304 PICSO 5732 3119 11200 Pichia sorbitophila (strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC 10061 / NRRL Y-12695) (Hybrid yeast) UP000000438 263820 PICTO 1532 3 1535 Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) UP000001887 530564 PIRSD 4684 27 4717 Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella staleyi) UP000007148 1109443 PIRID 11778 2 11790 Piriformospora indica (strain DSM 11827) UP000029541 1238 PISSA 2896 51 3605 Piscirickettsia salmonis UP000052058 1704028 None 2641 8 2649 Planctomycetes bacterium SM23_25 UP000002220 521674 PLAL2 4237 21 4258 Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) (Planctomyces limnophilus) UP000028680 666509 None 3022 2 3033 Planktomarina temperata RCA23 UP000027395 388467 None 4020 166 4190 Planktothrix agardhii NIVA-CYA 126/8 UP000031496 1526927 None 3059 25 3089 Planococcus sp. PAMC 21323 UP000043699 1499687 None 3353 0 3353 Planomicrobium sp. ES2 UP000051200 1736333 None 3503 18 3521 Plantibacter sp. Leaf314 UP000039324 37360 PLABS 9720 0 9727 Plasmodiophora brassicae (Clubroot disease) UP000007720 5823 PLABA 11656 0 12648 Plasmodium berghei (strain Anka) UP000002509 5825 PLACH 14614 0 15314 Plasmodium chabaudi UP000006319 1120755 None 5713 0 5716 Plasmodium cynomolgi strain B UP000001450 36329 PLAF7 5159 194 5369 Plasmodium falciparum (isolate 3D7) UP000030673 5843 PLAFO 5887 33 5929 Plasmodium falciparum (isolate NF54) UP000019103 57270 PLAFP 5988 49 6043 Plasmodium falciparum (isolate Palo Alto / Uganda) UP000030656 1036724 None 5744 18 5769 Plasmodium falciparum FCH/4 UP000030699 1036727 None 6244 57 6311 Plasmodium falciparum MaliPS096_E11 UP000030708 1036725 None 6643 56 6715 Plasmodium falciparum Tanzania (2000708) UP000030697 1237627 None 5865 39 5916 Plasmodium falciparum UGT5.1 UP000030640 1237626 None 5828 0 5832 Plasmodium inui San Antonio 1 UP000031513 5851 PLAKH 5100 0 10188 Plasmodium knowlesi (strain H) UP000030659 138298 None 5152 0 5160 Plasmodium vinckei petteri UP000030681 54757 None 1501 0 1502 Plasmodium vinckei vinckei UP000008333 126793 PLAVS 5389 0 5393 Plasmodium vivax (strain Salvador I) UP000008553 73239 PLAYO 7741 0 7797 Plasmodium yoelii yoelii UP000016901 891974 None 4928 79 5203 Plautia stali symbiont UP000005801 391625 None 8408 29 8450 Plesiocystis pacifica SIR-1 UP000014012 1315976 None 3348 29 3378 Plesiomonas shigelloides 302-73 UP000010382 118163 None 4191 64 4268 Pleurocapsa sp. PCC 7327 UP000027073 1137138 None 12185 1 12296 Pleurotus ostreatus PC15 UP000010422 1209962 PNEJ8 3419 0 3535 Pneumocystis jiroveci (strain SE8) (Pneumocystis pneumonia agent) UP000011958 1069680 PNEMU 3635 0 3638 Pneumocystis murina (strain B123) (Pneumocystis carinii f. sp. muris) UP000001197 515849 PODAN 10656 1 10657 Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) (Pleurage anserina) UP000028760 48698 POEFO 23381 7059 30658 Poecilia formosa (Amazon molly) (Limia formosa) UP000001670 686943 PNLV 4 0 4 Poinsettia latent virus (isolate Euphorbia pulcherrima/Germany/Siepen/2005) (PnLV) (Poinsettia cryptic virus) UP000003053 313594 None 2533 23 2557 Polaribacter irgensii 23-P UP000029991 1250005 None 3374 8 3411 Polaribacter sp. Hel1_85 UP000006470 313598 None 2625 9 2635 Polaribacter sp. MED152 UP000000644 365044 POLNA 4849 30 4929 Polaromonas naphthalenivorans (strain CJ2) UP000001983 296591 POLSJ 5418 19 5453 Polaromonas sp. (strain JS666 / ATCC BAA-500) UP000007275 1144318 None 4737 14 4752 Polaromonas sp. CF318 UP000043372 1504672 None 4728 11 4975 Polaromonas sp. CG9_12 UP000000356 12081 POL1M 1 0 1 Poliovirus type 1 (strain Mahoney) UP000008130 991905 POLGS 4304 50 4393 Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) UP000000231 312153 POLSQ 2070 4 2077 Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) UP000006582 452638 POLNS 1506 1 1508 Polynucleobacter necessarius subsp. necessarius (strain STIR1) UP000001396 13642 POLPA 12310 41 12367 Polysphondylium pallidum (Cellular slime mold) UP000001595 9601 PONAB 20416 2547 23052 Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii) UP000030153 1385513 None 3653 31 3685 Pontibacillus chungwhensis BH030062 UP000030528 1385510 None 3530 29 3559 Pontibacillus halophilus JSM 076056 = DSM 19796 UP000030401 1385512 None 3183 19 3202 Pontibacillus litoralis JSM 072002 UP000030403 1385511 None 4214 38 4252 Pontibacillus marinus BH030004 = DSM 16465 UP000030147 1385514 None 3930 34 3965 Pontibacillus yanchengensis Y32 UP000033109 400092 None 4070 33 4116 Pontibacter korlensis UP000003746 1144253 None 4010 34 4044 Pontibacter sp. BAB1700 UP000030960 1515334 None 5711 3 5716 Ponticoccus sp. UMTAT08 UP000006729 3694 POPTR 41264 3202 44678 Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) UP000007023 654929 PCV1C 2 4 6 Porcine circovirus 1 (isolate China) (PCV1) UP000006687 11049 PRRSL 10 1 11 Porcine reproductive and respiratory syndrome virus (strain Lelystad) (PRRSV) UP000000407 1002921 PSV13 1 0 1 Porcine sapelovirus (strain V13) (PSV) (Porcine enterovirus 8) UP000000408 650136 PTV1F 1 0 1 Porcine teschovirus 1 (isolate Pig/United Kingdom/F65/1967) (PTV-1) (Porcine teschovirus 1 (isolate F65)) UP000030988 1572751 None 2745 13 2760 Porphyrobacter mercurialis UP000037996 1523423 None 2864 8 2872 Porphyrobacter sp. AAP60 UP000030107 1517682 None 1849 7 1859 Porphyromonadaceae bacterium COT-184 OH4590 UP000006545 879243 PORAD 1671 1 1699 Porphyromonas asaccharolytica (strain ATCC 25260 / DSM 20707 / VPI 4198) (Bacteroides asaccharolyticus) UP000030125 36874 PORCN 1766 3 1771 Porphyromonas cangingivalis UP000030139 393921 None 1582 1 2356 Porphyromonas crevioricanis UP000004295 553175 POREA 1935 30 1965 Porphyromonas endodontalis (strain ATCC 35406 / BCRC 14492 / JCM 8526 / HG 370) UP000000588 242619 PORGI 1861 2 1908 Porphyromonas gingivalis (strain ATCC BAA-308 / W83) UP000030134 266762 None 1430 3 1433 Porphyromonas gingivicanis UP000030103 28115 None 1840 3 2149 Porphyromonas macacae UP000018064 1262916 None 1652 1 1653 Porphyromonas sp. CAG:1061 UP000030126 1537504 None 1731 3 1734 Porphyromonas sp. COT-108 OH1349 UP000030150 1515613 None 1410 2 1412 Porphyromonas sp. COT-239 OH1446 UP000030116 1515615 None 1615 3 1619 Porphyromonas sp. COT-290 OH860 UP000004156 1125723 None 1728 1 1729 Porphyromonas sp. oral taxon 279 str. F0450 UP000001743 561896 POSPM 8983 0 9083 Postia placenta (strain ATCC 44394 / Madison 698-R) (Brown rot fungus) (Poria monticola) UP000006723 12046 PLRV1 9 1 10 Potato leafroll virus (strain Potato/Scotland/strain 1/1984) (PLrV) UP000006715 652839 PMTVS 7 0 7 Potato mop-top virus (isolate Potato/Sweden/Sw) (PMTV) UP000000677 12168 PVMR 6 0 6 Potato virus M (strain Russian) (PVM) UP000011262 1289386 PVT92 3 0 3 Potato virus T (isolate Chenopodium amaranticolor/Peru/-/1992) (PVT) UP000008687 12185 PVXX3 5 0 5 Potato virus X (strain X3) (PVX) UP000000520 12219 PVYN 2 0 2 Potato virus Y (strain N) (PVY) UP000000572 652109 POLVP 4 0 4 Pothos latent virus (isolate Pigeonpea/India) (PoLV) UP000031395 1515610 None 4869 37 4907 Prauserella sp. Am3 UP000016648 1115809 None 2478 2 2481 Prevotella baroniae F0067 UP000003160 585502 None 2793 31 2825 Prevotella bergensis DSM 17361 UP000002786 868129 None 2062 2 2090 Prevotella bivia DSM 20514 UP000004524 752555 None 2702 46 2779 Prevotella bryantii B14 UP000003112 873513 None 2860 36 2896 Prevotella buccae ATCC 33574 UP000029556 1401074 None 2223 2 2232 Prevotella buccalis DNF00853 UP000018361 1263102 None 2327 4 2331 Prevotella copri CAG:164 UP000010862 908937 PREDD 2493 1 4450 Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043 / ES 2772) (Mitsuokella dentalis) UP000003610 866771 None 2510 46 2621 Prevotella disiens FB035-09AN UP000010099 246198 PREI7 2251 1 2266 Prevotella intermedia (strain 17) UP000003167 999422 None 2563 5 2574 Prevotella maculosa OT 289 UP000004394 862515 None 2308 26 2335 Prevotella marshii DSM 16973 = JCM 13450 UP000001498 553174 PREMB 2266 22 2296 Prevotella melaninogenica (strain ATCC 25845 / DSM 7089 / JCM 6325 / VPI 2381 / B282) (Bacteroides melaninogenicus) UP000016023 883158 None 2055 3 2064 Prevotella micans F0438 UP000005697 888743 None 2853 31 2884 Prevotella multiformis DSM 16608 UP000002772 688246 None 2684 10 2710 Prevotella multisaccharivorax DSM 17128 UP000005580 873533 None 2459 20 2488 Prevotella oralis ATCC 33269 UP000003805 563008 None 2636 5 2643 Prevotella oris C735 UP000005141 702438 None 2479 4 2488 Prevotella oulorum F0390 UP000016600 1081904 None 2254 3 2259 Prevotella pleuritidis F0068 UP000000927 264731 PRER2 2760 1 2763 Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) UP000010433 1127699 None 2557 4 2561 Prevotella saccharolytica F0055 UP000003874 888832 None 2914 24 2939 Prevotella salivae DSM 15606 UP000018183 1262917 None 2197 2 2199 Prevotella sp. CAG:1031 UP000018314 1262918 None 2255 8 2264 Prevotella sp. CAG:1058 UP000017987 1262919 None 2507 6 2513 Prevotella sp. CAG:1092 UP000017956 1262920 None 2433 8 2441 Prevotella sp. CAG:1124 UP000018111 1262922 None 2028 7 2035 Prevotella sp. CAG:1320 UP000017913 1262923 None 2759 12 2771 Prevotella sp. CAG:255 UP000018375 1262924 None 2071 5 2076 Prevotella sp. CAG:279 UP000018046 1262925 None 2123 9 2132 Prevotella sp. CAG:386 UP000018116 1262926 None 2293 4 2297 Prevotella sp. CAG:474 UP000018062 1262927 None 1953 3 1956 Prevotella sp. CAG:485 UP000018275 1262928 None 2504 3 2507 Prevotella sp. CAG:487 UP000018359 1262929 None 2168 3 2171 Prevotella sp. CAG:520 UP000018184 1262930 None 2303 6 2309 Prevotella sp. CAG:5226 UP000018343 1262931 None 2154 5 2160 Prevotella sp. CAG:592 UP000018295 1262932 None 2068 5 2073 Prevotella sp. CAG:604 UP000018057 1262933 None 1925 3 1928 Prevotella sp. CAG:617 UP000018039 1262934 None 2406 3 2409 Prevotella sp. CAG:732 UP000018353 1262935 None 1931 5 1936 Prevotella sp. CAG:755 UP000018078 1262936 None 2053 2 2055 Prevotella sp. CAG:873 UP000018147 1262937 None 2054 4 2058 Prevotella sp. CAG:891 UP000018357 1262938 None 2223 2 2225 Prevotella sp. CAG:924 UP000029732 1287488 None 2139 5 2144 Prevotella sp. S7 MS 2 UP000029597 1284775 None 2239 1 2240 Prevotella sp. S7-1-8 UP000015929 575614 None 1944 3 1960 Prevotella sp. oral taxon 299 str. F0039 UP000004421 1095752 None 2431 1 2442 Prevotella sp. oral taxon 306 str. F0472 UP000003829 575615 None 2908 18 2926 Prevotella sp. oral taxon 317 str. F0108 UP000010460 1035197 None 2312 5 2317 Prevotella sp. oral taxon 473 str. F0040 UP000004001 679189 None 2164 38 2202 Prevotella timonensis CRIS 5C-B1 UP000005239 54126 PRIPA 29077 3 29202 Pristionchus pacificus (Parasitic nematode) UP000000788 93059 PROM4 1842 13 1856 Prochlorococcus marinus (strain MIT 9211) UP000001423 74547 PROMM 2812 18 2847 Prochlorococcus marinus (strain MIT 9313) UP000002535 59920 PROMT 2136 6 2163 Prochlorococcus marinus (strain NATL2A) UP000001420 167539 PROMA 1745 136 1882 Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) UP000001026 59919 PROMP 1926 16 1948 Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) UP000034681 317619 None 3566 51 3737 Prochlorothrix hollandica PCC 9006 UP000017052 553198 None 2897 9 2913 Propionibacterium acidifaciens F0233 UP000000214 1171373 PROA4 3289 27 3336 Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) UP000000603 267747 PROAC 2286 8 2297 Propionibacterium acnes (strain KPA171202 / DSM 16379) UP000019082 1302241 None 3747 5 3752 Propionibacterium acnes JCM 18909 UP000019080 1302242 None 3656 7 3663 Propionibacterium acnes JCM 18916 UP000019081 1302243 None 4106 5 4111 Propionibacterium acnes JCM 18918 UP000019083 1302244 None 3341 2 3343 Propionibacterium acnes JCM 18920 UP000000936 754252 PROFC 2262 48 2362 Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) UP000016307 1160719 None 1940 22 1962 Propionibacterium granulosum DSM 20700 UP000003118 767029 PROPF 2920 11 2938 Propionibacterium propionicum (strain F0230a) UP000014567 1203605 None 2512 11 2524 Propionibacterium sp. oral taxon 192 str. F0372 UP000014417 883161 None 2067 9 2082 Propionimicrobium lymphophilum ACS-093-V-SCH5 UP000041641 1677858 None 3929 20 3949 Propionispora sp. Iso2/2 UP000002725 290512 PROA2 2303 16 2327 Prosthecochloris aestuarii (strain DSM 271 / SK 413) UP000048984 665126 None 5468 33 5502 Prosthecomicrobium hirschii UP000018309 1262987 None 1690 3 1693 Proteobacteria bacterium CAG:495 UP000008319 529507 PROMH 3631 30 3662 Proteus mirabilis (strain HI4320) UP000006464 471881 None 4835 74 4909 Proteus penneri ATCC 35198 UP000000529 264201 PARUW 1974 49 2030 Protochlamydia amoebophila (strain UWE25) UP000011266 1289469 PRVFL 4 0 4 Providence virus (isolate Helicoverpa zea/United States/vFLM1/-) (PRVFL) UP000009338 1141663 None 3825 22 3848 Providencia rettgeri Dmel1 UP000010290 1141660 None 3095 18 3148 Providencia sneebia DSM 19967 UP000006882 3760 PRUPE 27609 625 28748 Prunus persica (Peach) (Amygdalus persica) UP000011201 927668 None 4714 37 4757 Pseudanabaena biceps PCC 7429 UP000010386 82654 None 3791 33 3854 Pseudanabaena sp. PCC 7367 UP000001981 342610 PSEA6 4254 17 4281 Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) UP000016487 1117314 None 4440 17 4458 Pseudoalteromonas citrea DSM 8771 UP000006843 326442 PSEHT 3433 51 3486 Pseudoalteromonas haloplanktis (strain TAC 125) UP000021443 1452721 None 3954 20 3994 Pseudoalteromonas lipolytica SCSIO 04301 UP000011175 1268239 None 3669 11 3681 Pseudoalteromonas luteoviolacea B = ATCC 29581 UP000033434 1129367 None 5105 16 5121 Pseudoalteromonas luteoviolacea S4054 UP000002136 10661 BPPM2 21 1 24 Pseudoalteromonas phage PM2 (Bacteriophage PM2) UP000033511 43662 PSEO7 4120 14 4746 Pseudoalteromonas piscicida UP000037848 187330 None 3991 22 4023 Pseudoalteromonas porphyrae UP000033452 43658 None 4371 19 4392 Pseudoalteromonas rubra UP000033664 151081 None 3465 5 3470 Pseudoalteromonas ruthenica UP000030341 1348114 None 3974 23 4003 Pseudoalteromonas sp. OCN003 UP000006201 87626 None 4464 26 4504 Pseudoalteromonas tunicata D2 UP000016932 383855 PSEFD 13043 19 13066 Pseudocercospora fijiensis (strain CIRAD86) (Black leaf streak disease fungus) (Mycosphaerella fijiensis) UP000003639 411467 None 4743 61 4827 Pseudoflavonifractor capillosus ATCC 29799 UP000001274 748280 PSEUL 3752 206 4015 Pseudogulbenkiania sp. (strain NH8B) UP000011064 658429 PSED2 9072 50 9124 Pseudogymnoascus destructans (strain ATCC MYA-4855 / 20631-21) (Bat white-nose syndrome fungus) (Geomyces destructans) UP000029295 1420912 None 9799 0 9802 Pseudogymnoascus sp. VKM F-103 UP000029320 1437433 None 9480 0 9482 Pseudogymnoascus sp. VKM F-3557 UP000029338 1420901 None 9470 2 9472 Pseudogymnoascus sp. VKM F-3775 UP000029329 1391699 None 9927 1 9928 Pseudogymnoascus sp. VKM F-3808 UP000029299 1420902 None 8539 0 8540 Pseudogymnoascus sp. VKM F-4246 UP000029327 1420906 None 8726 1 8728 Pseudogymnoascus sp. VKM F-4281 (FW-2241) UP000029288 1420907 None 8666 1 8668 Pseudogymnoascus sp. VKM F-4513 (FW-928) UP000029302 1420909 None 10674 1 10676 Pseudogymnoascus sp. VKM F-4515 (FW-2607) UP000029268 1420910 None 9362 0 9363 Pseudogymnoascus sp. VKM F-4516 (FW-969) UP000029270 1420911 None 10741 0 10744 Pseudogymnoascus sp. VKM F-4517 (FW-2822) UP000029284 1420913 None 11616 2 11619 Pseudogymnoascus sp. VKM F-4518 (FW-2643) UP000029315 1420914 None 10628 0 10630 Pseudogymnoascus sp. VKM F-4519 (FW-2642) UP000029308 1420915 None 11550 0 11551 Pseudogymnoascus sp. VKM F-4520 (FW-2644) UP000029640 1265313 None 2853 7 2860 Pseudohaliea rubra DSM 19751 UP000051186 1736466 None 4385 29 4414 Pseudolabrys sp. Root1462 UP000051530 146866 None 3636 0 3644 Pseudoloma neurophilia UP000002438 208964 PSEAE 5550 14 5576 Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) UP000016560 1215092 None 4406 122 4531 Pseudomonas alcaligenes NBRC 14159 UP000028931 237609 None 5079 40 5177 Pseudomonas alkylphenolia UP000019031 1441629 None 5112 37 5174 Pseudomonas cichorii JBC1 UP000029493 157783 None 3994 26 4031 Pseudomonas cremoricolorata UP000012082 1294143 None 5012 33 5056 Pseudomonas denitrificans ATCC 13867 UP000008540 220664 PSEF5 6063 45 6109 Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) UP000002332 216595 PSEFS 6310 78 6394 Pseudomonas fluorescens (strain SBW25) UP000005437 1114970 None 5787 50 5862 Pseudomonas fluorescens F113 UP000000686 743720 PSEF1 4416 43 4461 Pseudomonas fulva (strain 12-X) UP000037931 50340 None 6242 74 6316 Pseudomonas fuscovaginae UP000025241 1301098 PSEKB 5596 20 5750 Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13) UP000029719 243924 None 4556 43 4607 Pseudomonas lutea UP000000229 399739 PSEMY 4529 34 4594 Pseudomonas mendocina (strain ymp) UP000009085 31535 BPD3 98 0 98 Pseudomonas phage D3 (Bacteriophage D3) UP000000875 10708 BPD31 55 0 55 Pseudomonas phage D3112 (Bacteriophage D3112) UP000002118 280701 None 70 0 70 Pseudomonas phage F116 UP000002082 484895 BPLUZ 68 0 68 Pseudomonas phage LUZ24 UP000008125 1283339 BPPPB 93 0 93 Pseudomonas phage PB1 (isolate Pseudomonas aeruginosa/Scotland/Bradley/1968) (PB1) (Bacteriophage PB1) UP000002083 462590 BPPYU 77 0 77 Pseudomonas phage YuA UP000002610 10879 BPPH6 13 0 13 Pseudomonas phage phi6 (Bacteriophage phi-6) UP000002098 169683 BPDPK 369 0 369 Pseudomonas phage phiKZ UP000004220 1112217 None 4724 35 4759 Pseudomonas psychrotolerans L19 UP000000556 160488 PSEPK 5305 8 5349 Pseudomonas putida (strain KT2440) UP000010448 1005395 None 5783 51 5836 Pseudomonas putida CSV86 UP000010133 1218169 None 3576 21 3599 Pseudomonas putida S11 UP000015503 1245471 None 5515 280 5875 Pseudomonas resinovorans NBRC 106553 UP000029499 216142 None 3861 32 3893 Pseudomonas rhizosphaerae UP000019475 1439940 None 5034 19 5054 Pseudomonas sp. BAY1663 UP000033602 1629711 None 2985 31 3110 Pseudomonas sp. BRH_c35 UP000014867 911241 None 6337 66 6403 Pseudomonas sp. CF161 UP000016488 1386078 None 4932 42 4974 Pseudomonas sp. EGD-AK9 UP000032531 1604022 None 5345 44 5404 Pseudomonas sp. FeS53a UP000017050 1203578 None 5283 30 5337 Pseudomonas sp. HPB0071 UP000011925 1206777 None 4412 38 4450 Pseudomonas sp. Lz4W UP000004339 1179778 None 5620 55 5678 Pseudomonas sp. M47T1 UP000031550 984195 None 5481 38 5519 Pseudomonas sp. SHC52 UP000031652 1028989 None 5527 67 5598 Pseudomonas sp. StFLB209 UP000051864 1729724 None 3991 41 4032 Pseudomonas sp. TTU2014-080ASC UP000019522 316 PSEST 4117 28 4286 Pseudomonas stutzeri (Pseudomonas perfectomarina) UP000000233 379731 PSEU5 4078 14 4127 Pseudomonas stutzeri (strain A1501) UP000002515 223283 PSESM 5424 7 5620 Pseudomonas syringae pv. tomato (strain DC3000) UP000030063 1395571 None 4524 56 4594 Pseudomonas taeanensis MS-3 UP000030980 400095 None 3246 29 3275 Pseudomonas tuomuerensis UP000007809 675635 PSEUX 6554 66 6681 Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) UP000030004 1461694 None 4176 26 4203 Pseudooceanicola atlanticus UP000000310 762903 PSESL 3761 19 3792 Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans) UP000004754 887929 None 2467 47 2514 Pseudoramibacter alactolyticus ATCC 23263 UP000051560 1736316 None 5671 37 5708 Pseudorhodoferax sp. Leaf267 UP000051759 1736318 None 5948 44 5992 Pseudorhodoferax sp. Leaf274 UP000002016 416591 PSELT 2035 5 2040 Pseudothermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / NBRC 107922 / TMO) (Thermotoga lettingae) UP000006804 688269 None 1917 11 1945 Pseudothermotoga thermarum DSM 5069 UP000005634 911045 PSEUV 5142 314 5468 Pseudovibrio sp. (strain FO-BEG1) UP000052052 344882 None 2994 7 3003 Pseudoxanthomonas dokdonensis UP000051430 1736576 None 3416 6 3422 Pseudoxanthomonas sp. Root65 UP000005870 1045855 PSEUP 3139 8 3149 Pseudoxanthomonas spadix (strain BD-a59) UP000008632 743721 PSEUU 3063 5 3070 Pseudoxanthomonas suwonensis (strain 11-1) UP000011976 1151754 PSEA3 6543 97 6640 Pseudozyma antarctica (strain T-34) (Yeast) (Candida antarctica) UP000014071 1305764 PSEHS 7472 0 7472 Pseudozyma hubeiensis (strain SY62) (Yeast) UP000006840 670426 PSHV1 71 1 72 Psittacid herpesvirus 1 (isolate Amazon parrot/-/97-0001/1997) (PsHV-1) (Pacheco's disease virus) UP000008790 654917 PEPVA 6 0 6 Psittacus erithacus timneh papillomavirus (isolate African grey parrot) (PePV) UP000051878 1712028 None 3876 34 3911 Psychrobacillus sp. FJAT-21963 UP000000546 259536 PSYA2 2097 2 2120 Psychrobacter arcticus (strain DSM 17307 / 273-4) UP000001993 349106 PSYWF 2332 7 2385 Psychrobacter sp. (strain PRwf-1) UP000008514 313595 PSYTT 3447 10 3526 Psychroflexus torquis (strain ATCC 700755 / ACAM 623) UP000000639 357804 PSYIN 3504 26 3545 Psychromonas ingrahamii (strain 37) UP000010320 314282 None 2569 9 2580 Psychromonas sp. CNPT3 UP000010552 9402 PTEAL 19517 3 19543 Pteropus alecto (Black flying fox) UP000008783 418459 PUCGT 15685 123 15920 Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) (Black stem rust fungus) UP000037035 27349 None 21012 20 21078 Puccinia sorghi UP000005240 630390 PUCT1 11515 0 11638 Puccinia triticina (isolate 1-1 / race 1 (BBBD)) (Brown leaf rust fungus) UP000036046 1618204 None 5186 26 5331 Puniceibacterium sp. IMCC21224 UP000007460 488538 PUNMI 2534 11 2546 Puniceispirillum marinum (strain IMCC1322) UP000008737 1007105 PUSST 3740 11 3773 Pusillimonas sp. (strain T7-7) UP000029665 5643 PYCCI 10179 1 10233 Pycnoporus cinnabarinus (Cinnabar-red polypore) (Trametes cinnabarina) UP000006462 352165 None 2718 37 2755 Pyramidobacter piscolens W5455 UP000001067 861557 PYRTT 11703 2 11799 Pyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres) UP000001471 426418 PYRTR 12060 2 12169 Pyrenophora tritici-repentis (strain Pt-1C-BFP) (Wheat tan spot fungus) (Drechslera tritici-repentis) UP000031518 454194 None 3156 23 3179 Pyrinomonas methylaliphatogenes UP000002439 178306 PYRAE 2588 2 2595 Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) UP000008777 654907 PSVY 48 0 48 Pyrobaculum spherical virus (isolate United States/Yellowstone) (PSV) UP000000810 272844 PYRAB 1780 8 1788 Pyrococcus abyssi (strain GE5 / Orsay) UP000001013 186497 PYRFU 2044 1 2057 Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) UP000001037 694429 PYRF1 1955 12 1967 Pyrolobus fumarii (strain DSM 11204 / 1A) UP000018144 1076935 PYROM 13304 2 13329 Pyronema omphalodes (strain CBS 100304) (Pyronema confluens) UP000019132 431595 None 15121 32 15322 Pythium ultimum DAOM BR144 UP000000868 10272 RFVKA 153 0 164 Rabbit fibroma virus (strain Kasza) (RFV) (Shope fibroma virus (strain Kasza)) UP000000413 314536 RHDVF 2 1 3 Rabbit hemorrhagic disease virus (strain Rabbit/Germany/FRG/1989) (Ra/LV/RHDV/GH/1989/GE) (RHDV-FRG) UP000008649 103929 RABVP 5 4 9 Rabies virus (strain Pasteur vaccins / PV) (RABV) UP000007020 654904 NPVR1 149 0 149 Rachiplusia ou multiple nucleopolyhedrovirus (strain R1) (RoMNPV) UP000009010 745277 RAHAC 4809 32 4866 Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65) UP000002566 402626 RALPJ 4849 41 4952 Ralstonia pickettii (strain 12J) UP000001436 267608 RALSO 4974 28 5099 Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum) UP000004277 795666 None 3495 17 3513 Ralstonia sp. PBA UP000051173 1736365 None 4252 23 4275 Ramlibacter sp. Leaf400 UP000008385 365046 RAMTT 3702 178 3881 Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) UP000011238 1283342 RAHV1 132 0 132 Ranid herpesvirus 1 (strain McKinnell) (RaHV-1) UP000032530 575 RAOPL 2900 23 2923 Raoultella planticola (Klebsiella planticola) UP000001102 652675 RBDVR 3 0 3 Raspberry bushy dwarf virus (isolate Malling Jewel raspberry/R15) (RBDV) UP000050868 1736327 None 3521 16 3537 Rathayibacter sp. Leaf296 UP000002494 10116 RAT 21330 10225 32943 Rattus norvegicus (Rat) UP000008651 12267 RCNMV 3 1 4 Red clover necrotic mosaic virus (RCNMV) UP000005953 314283 None 4216 20 4238 Reinekea blandensis MED297 UP000002007 288705 RENSM 3410 11 3507 Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235) UP000007253 10884 REOVL 11 1 12 Reovirus type 1 (strain Lang) (T1L) (Mammalian orthoreovirus 1) UP000023152 46433 RETFI 39903 0 39963 Reticulomyxa filosa UP000004374 562729 None 3602 128 3730 Rheinheimera nanhaiensis E407-8 UP000004282 506534 None 3933 8 3942 Rheinheimera sp. A13L UP000051465 1736433 None 5836 51 5888 Rhizobacter sp. Root1221 UP000051195 1736511 None 5585 26 5621 Rhizobacter sp. Root29 UP000051611 1736528 None 4674 33 4707 Rhizobacter sp. Root404 UP000050497 1653334 None 3441 3 3449 Rhizobiales bacterium HL-109 UP000001936 347834 RHIEC 5898 23 5963 Rhizobium etli (strain CFN 42 / ATCC 51251) UP000012429 363754 None 6209 58 6271 Rhizobium freirei PRF 81 UP000031368 1418105 None 7024 10 7041 Rhizobium gallicum bv. gallicum R602 UP000000552 266835 RHILO 7233 22 7276 Rhizobium loti (strain MAFF303099) (Mesorhizobium loti) UP000001976 266834 RHIME 6128 41 6229 Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) UP000009319 1211777 None 5962 396 6358 Rhizobium mesoamericanum STM3625 UP000035017 358 RHIRD 4420 24 4473 Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter) UP000001054 394 RHISN 6220 54 6366 Rhizobium sp. (strain NGR234) UP000009023 1144314 None 7154 75 7229 Rhizobium sp. CF142 UP000034908 1120688 None 5547 56 5605 Rhizobium sp. LC145 UP000050939 1736380 None 5781 57 5839 Rhizobium sp. Leaf453 UP000010792 1125847 None 4460 143 4640 Rhizobium sp. NT-26 UP000017669 1125979 None 5322 25 5347 Rhizobium sp. PDO1-076 UP000052066 1736429 None 4782 42 4824 Rhizobium sp. Root1212 UP000051066 1736432 None 5281 44 5325 Rhizobium sp. Root1220 UP000051907 1736473 None 4958 44 5002 Rhizobium sp. Root149 UP000052057 1736543 None 4817 36 4853 Rhizobium sp. Root482 UP000051333 1736545 None 5524 57 5581 Rhizobium sp. Root483D2 UP000029602 1532558 None 5545 50 5595 Rhizobium sp. YS-1r UP000044841 456999 None 11739 139 11897 Rhizoctonia solani UP000027456 1423351 None 10989 1 10993 Rhizoctonia solani 123E UP000027042 1287689 None 13948 0 13952 Rhizoctonia solani AG-8 WAC10335 UP000018888 747089 RHIID 29838 8 29854 Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) (Arbuscular mycorrhizal fungus) (Glomus intraradices) UP000022910 1432141 None 26709 1960 29257 Rhizophagus irregularis DAOM 197198w UP000009138 246409 RHIO9 16960 11 17459 Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) (Mucormycosis agent) (Rhizopus arrhizus var. delemar) UP000038169 58291 None 19156 508 21644 Rhizopus microsporus UP000011260 1289384 RSET1 2 0 2 Rhizosolenia setigera RNA virus 01 (isolate RsRNAV06) (RsetRNAV01) (Rhizosolenia setigera RNA virus) UP000004210 1163408 None 3386 14 3400 Rhodanobacter fulvus Jip2 UP000004557 1162282 None 3873 45 3965 Rhodanobacter sp. 115 UP000003226 1163407 None 3427 11 3439 Rhodanobacter spathiphylli B39 UP000003449 1163409 None 3665 25 3690 Rhodanobacter thiooxydans LCS2 UP000015103 13249 RHOPR 15178 23 15481 Rhodnius prolixus (Triatomid bug) UP000002361 272942 RHOCB 3610 22 3642 Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) UP000051243 1655597 None 2404 12 2422 Rhodobacter sp. BACL10 MAG-120910-bin24 UP000018503 1408890 None 3559 11 3571 Rhodobacter sp. CACIA14H1 UP000010121 371731 None 3393 12 3408 Rhodobacter sp. SW2 UP000002703 272943 RHOS4 4234 51 4287 Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) UP000016848 1366046 None 3170 13 3183 Rhodobacteraceae bacterium HIMB11 UP000050413 1666912 None 2943 1 5714 Rhodobacteraceae bacterium HL-91 UP000050293 1666913 None 3681 1 3684 Rhodobacteraceae bacterium HLUCCA08 UP000050476 1666916 None 3599 1 3603 Rhodobacteraceae bacterium HLUCCA12 UP000050369 1666914 None 3302 0 3304 Rhodobacteraceae bacterium HLUCCO07 UP000050333 1666917 None 3668 1 3678 Rhodobacteraceae bacterium HLUCCO18 UP000005746 314270 None 4105 3 4179 Rhodobacteraceae bacterium HTCC2083 UP000004731 388401 None 3612 24 3667 Rhodobacteraceae bacterium HTCC2150 UP000005135 467661 None 4225 4 4274 Rhodobacteraceae bacterium KLH11 UP000023196 1169855 None 4585 31 4632 Rhodobacteraceae bacterium PD-2 UP000009381 367336 None 2211 25 2240 Rhodobacterales bacterium HTCC2255 UP000024941 191292 None 5461 48 5528 Rhodococcus aetherivorans UP000004245 525370 None 4941 88 5030 Rhodococcus equi ATCC 33707 UP000002204 234621 RHOE4 6229 195 6437 Rhodococcus erythropolis (strain PR4 / NBRC 100887) UP000008710 101510 RHOJR 8992 83 9145 Rhodococcus jostii (strain RHA1) UP000018781 1435356 None 4781 44 5158 Rhodococcus pyridinivorans SB3094 UP000013525 1273125 None 4387 25 4417 Rhodococcus rhodnii LMG 5362 UP000032410 1564114 None 5154 39 5213 Rhodococcus sp. B7740 UP000032087 1587522 None 3833 32 3866 Rhodococcus sp. MEB064 UP000044872 260936 None 5253 236 5492 Rhodococcus sp. RD6.2 UP000008332 338969 RHOFT 4386 15 4415 Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) (Albidiferax ferrireducens) UP000001399 648757 RHOVT 3491 22 3565 Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) UP000016843 1123057 None 4883 21 4904 Rhodonellum psychrophilum GCM71 = DSM 17998 UP000001025 243090 RHOBA 6999 272 7325 Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1) UP000011991 1265738 None 7796 28 7825 Rhodopirellula maiorica SM1 UP000011885 1263870 None 6846 26 6873 Rhodopirellula sallentina SM41 UP000012028 595460 None 7210 28 7239 Rhodopirellula sp. SWK7 UP000032515 1076 RHOPL 5516 64 5581 Rhodopseudomonas palustris UP000001426 258594 RHOPA 4785 26 4820 Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) UP000001948 316056 RHOPB 4823 41 4886 Rhodopseudomonas palustris (strain BisB18) UP000033468 1629718 None 3383 14 3424 Rhodospirillaceae bacterium BRH_c57 UP000001591 414684 RHOCS 3801 183 4003 Rhodospirillum centenum (strain ATCC 51521 / SW) UP000001929 269796 RHORT 3809 26 3837 Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIB 8255 / S1) UP000006141 1001064 RHOT2 2816 0 2817 Rhodosporidium toruloides (strain ATCC 204091 / IIP 30 / MTCC 1151) (Yeast) (Rhodotorula glutinis (strain ATCC 204091)) UP000016926 1130832 RHOT1 8138 0 8140 Rhodosporidium toruloides (strain NP11) (Yeast) (Rhodotorula gracilis) UP000002221 518766 RHOM4 2847 14 2863 Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) (Rhodothermus obamensis) UP000029524 1469613 None 3417 22 3440 Rhodovulum sp. NI22 UP000002930 1187851 None 4458 32 4490 Rhodovulum sp. PH10 UP000002239 142804 RDVF 13 0 13 Rice dwarf virus (isolate Fujian) (RDV) UP000006720 10986 RGDV 12 0 12 Rice gall dwarf virus (RGDV) UP000000348 649603 RRSVT 11 0 11 Rice ragged stunt virus (isolate Thailand) (RRSV) UP000006677 36394 RSVT 7 0 7 Rice stripe virus (isolate T) (RSV) UP000002246 10655 RTBVP 4 0 4 Rice tungro bacilliform virus (isolate Philippines) (RTBV) UP000007086 337081 RTSVA 1 0 1 Rice tungro spherical virus (strain A) (RTSV) (Rice tungro spherical waikavirus) UP000019767 1164990 None 7591 19 7768 Richelia intracellularis UP000008311 3988 RICCO 31198 21 31307 Ricinus communis (Castor bean) UP000008005 1105111 RICAG 1374 3 1390 Rickettsia amblyommii (strain GAT-30V) UP000002480 272947 RICPR 834 0 835 Rickettsia prowazekii (strain Madrid E) UP000028936 1528098 None 1657 2 1780 Rickettsiales bacterium Ac37b UP000006276 1228997 None 2187 0 2187 Riemerella anatipestifer RA-CH-1 UP000001700 515618 RIEPU 540 0 556 Riesia pediculicola (strain USDA) UP000002477 11589 RVFVZ 4 2 6 Rift valley fever virus (strain ZH-548 M12) (RVFV) UP000010380 373994 None 6550 67 6644 Rivularia sp. PCC 7116 UP000009049 313596 ROBBH 3194 17 3211 Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) UP000036477 1504536 None 6073 46 6154 Robinsoniella sp. RHS UP000029743 1554474 ROSV2 1 0 1 Rosavirus A2 (isolate Human/Gambia/GA7403/2008) UP000052104 1213588 None 8 0 8 Rose yellow vein virus UP000008178 585394 ROSHA 3322 29 3362 Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) UP000008953 718255 None 3604 25 3630 Roseburia intestinalis XB6B4 UP000018212 1263105 None 2633 20 2653 Roseburia inulinivorans CAG:15 UP000018092 1262940 None 2882 19 2901 Roseburia sp. CAG:100 UP000018230 1262941 None 2358 20 2378 Roseburia sp. CAG:18 UP000018104 1262942 None 2504 19 2523 Roseburia sp. CAG:182 UP000018336 1262943 None 2394 26 2420 Roseburia sp. CAG:197 UP000018355 1262944 None 2388 13 2401 Roseburia sp. CAG:303 UP000018292 1262945 None 2219 4 2223 Roseburia sp. CAG:309 UP000018173 1262947 None 2288 27 2315 Roseburia sp. CAG:45 UP000018378 1262949 None 2467 15 2482 Roseburia sp. CAG:50 UP000019593 1294273 None 3413 20 3448 Roseibacterium elongatum DSM 19469 UP000005735 744980 None 5878 6 6118 Roseibium sp. TrichSKD4 UP000006554 357808 ROSS1 4454 40 4517 Roseiflexus sp. (strain RS-1) UP000019063 1317118 None 4235 29 4266 Roseivivax atlanticus UP000022447 1449350 None 4280 24 4306 Roseivivax halodurans JCM 10272 UP000023430 1449351 None 4596 30 4628 Roseivivax isoporae LMG 25204 UP000011276 658904 RMBV1 2 0 2 Rosellinia necatrix megabirnavirus 1 (isolate -/Japan/W779/2001) (RnMBV1) UP000008775 311229 MYRVW 12 0 12 Rosellinia necatrix mycoreovirus 3 (isolate W370) (RnMYRV-3) (Rosellinia anti-rot virus) UP000029940 1559369 RNQVW 4 0 4 Rosellinia necatrix quadrivirus 1 (isolate Rosellinia necatrix/Japan/W1075/1997) UP000007029 375451 ROSDO 3948 170 4129 Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (Erythrobacter sp. (strain OCh 114)) (Roseobacter denitrificans) UP000004119 351016 None 3988 84 4143 Roseobacter sp. AzwK-3b UP000003535 391593 None 3641 19 3660 Roseobacter sp. CCS2 UP000002944 391589 None 4179 6 4203 Roseobacter sp. GAI101 UP000005943 314262 None 4480 21 4535 Roseobacter sp. MED193 UP000005964 388739 None 4468 29 4537 Roseobacter sp. SK209-2-6 UP000005324 525371 None 4652 122 4774 Roseomonas cervicalis ATCC 49957 UP000051295 1641875 None 4203 33 4238 Roseovarius atlanticus UP000051401 540747 None 5500 34 5534 Roseovarius indicus UP000005954 89187 ROSNI 3527 18 3547 Roseovarius nubinhibens (strain ATCC BAA-591 / DSM 15170 / ISM) UP000033676 1629709 None 4426 30 4671 Roseovarius sp. BRH_c41 UP000037046 74031 None 3683 1 3685 Roseovarius tolerans UP000001119 450149 ROTSH 12 1 13 Rotavirus A (isolate Monkey/South Africa/SA11-H96/1958 G3-P5B[2]-I2-R2-C5-M5-A5-N5-T5-E2-H5) (RV-A) (Simian Agent 11 (isolate SI/South Africa/H96/58)) UP000007663 335103 ROTJ1 11 0 11 Rotavirus B (isolate Human/China/ADRV-N J19/1997) (RV ADRV-N) (Rotavirus (isolate novel adult diarrhea rotavirus-J19)) UP000007664 31567 ROTHC 11 0 11 Rotavirus C (isolate Human/United Kingdom/Bristol/1989) (RV-C) UP000000387 762948 ROTDC 2191 21 2217 Rothia dentocariosa (strain ATCC 17931 / CDC X599 / XDIA) UP000001883 680646 ROTMD 1986 5 1992 Rothia mucilaginosa (strain DY-18) (Stomatococcus mucilaginosus) UP000052098 369584 None 7 0 7 Rousettus aegyptiacus papillomavirus 1 UP000030755 988480 None 6337 0 6350 Rozella allomycis CSF55 UP000000571 11045 RUBVT 2 0 2 Rubella virus (strain Therien) (RUBV) UP000019666 442562 None 4930 20 4966 Rubellimicrobium mesophilum DSM 19309 UP000015346 1123069 None 3231 13 3244 Rubellimicrobium thermophilum DSM 16684 UP000016960 582515 None 3418 37 3457 Rubidibacter lacunae KORDI 51-2 UP000006860 756272 RUBBR 4686 24 4750 Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis) UP000007883 983917 RUBGI 4505 181 4694 Rubrivivax gelatinosus (strain NBRC 100245 / IL144) UP000025229 42256 None 3129 19 3161 Rubrobacter radiotolerans UP000006637 266117 RUBXD 3115 12 3140 Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) UP000005093 644107 RUELI 3595 8 3611 Ruegeria lacuscaerulensis (strain DSM 11314 / KCTC 2953 / ITI-1157) (Silicibacter lacuscaerulensis) UP000001023 246200 RUEPO 4260 9 4279 Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) (Silicibacter pomeroyi) UP000000636 292414 RUEST 3834 15 3864 Ruegeria sp. (strain TM1040) (Silicibacter sp.) UP000031326 1577904 None 4168 20 4189 Ruegeria sp. ANG-S4 UP000051260 1715692 None 4538 3 4541 Ruegeria sp. CECT 5091 UP000036458 1379910 None 3430 25 3457 Rufibacter sp. DG31D UP000002801 552398 None 2972 15 2994 Ruminococcaceae bacterium D16 UP000006919 697329 RUMA7 3766 9 3872 Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) UP000004259 246199 None 3797 29 3833 Ruminococcus albus 8 UP000016662 411473 None 3467 8 3475 Ruminococcus callidus ATCC 27760 UP000007054 213810 RUMC1 2111 3 2114 Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / KCTC 15320 / 18P13) UP000019365 1341157 None 3169 15 3185 Ruminococcus flavefaciens 007c UP000018114 1263106 None 2564 24 2589 Ruminococcus gnavus CAG:126 UP000003254 471875 None 2651 55 2748 Ruminococcus lactaris ATCC 29176 UP000018059 1263107 None 2320 26 2346 Ruminococcus obeum CAG:39 UP000018037 1262950 None 1906 11 1917 Ruminococcus sp. CAG:108 UP000018033 1262951 None 2570 23 2593 Ruminococcus sp. CAG:17 UP000018315 1262952 None 1928 9 1937 Ruminococcus sp. CAG:177 UP000018181 1262953 None 1954 7 1961 Ruminococcus sp. CAG:254 UP000018377 1262954 None 2225 9 2236 Ruminococcus sp. CAG:330 UP000017936 1262955 None 2323 8 2331 Ruminococcus sp. CAG:353 UP000018166 1262957 None 1849 4 1853 Ruminococcus sp. CAG:382 UP000017925 1262958 None 1962 9 1971 Ruminococcus sp. CAG:403 UP000018082 1262961 None 2044 10 2055 Ruminococcus sp. CAG:563 UP000018131 1262962 None 2251 13 2264 Ruminococcus sp. CAG:57 UP000018387 1262963 None 2153 2 2156 Ruminococcus sp. CAG:579 UP000017995 1262964 None 2731 17 2748 Ruminococcus sp. CAG:60 UP000017977 1262965 None 1952 11 1963 Ruminococcus sp. CAG:624 UP000018243 1262966 None 1629 4 1633 Ruminococcus sp. CAG:724 UP000018027 1262967 None 2465 27 2492 Ruminococcus sp. CAG:9 UP000007055 657323 None 3239 21 3260 Ruminococcus sp. SR1/5 UP000017998 1263108 None 2004 15 2019 Ruminococcus torques CAG:61 UP000008956 657313 None 2782 15 2798 Ruminococcus torques L2-14 UP000000493 761193 RUNSL 5724 26 5792 Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) UP000002587 413404 RUTMC 975 1 976 Ruthia magnifica subsp. Calyptogena magnifica UP000000568 652106 RGMVD 1 0 1 Ryegrass mosaic virus (isolate Denmark/Danish) (RGMV) UP000050662 1527298 None 631 1 694 SAR11 cluster bacterium PRT-SC02 UP000004261 909943 None 2328 6 2334 SAR116 cluster alpha proteobacterium HIMB100 UP000051027 1655612 None 1356 3 1364 SAR86 cluster bacterium BACL1 MAG-120820-bin45 UP000010305 1123866 None 1287 11 1298 SAR86 cluster bacterium SAR86A UP000010116 1123867 None 1703 104 1809 SAR86 cluster bacterium SAR86B UP000010310 1208365 None 1402 1 1403 SAR86 cluster bacterium SAR86E UP000051070 1655625 None 2246 7 2253 SAR92 bacterium BACL16 MAG-120619-bin48 UP000051213 1655626 None 1543 1 1544 SAR92 bacterium BACL26 MAG-121220-bin70 UP000027590 1343158 None 1872 5 1877 Saccharibacter sp. AM169 UP000019402 869213 None 4656 7 4663 Saccharicrinis fermentans DSM 9555 = JCM 21142 UP000004926 882083 None 5507 60 5578 Saccharomonospora marina XMU15 UP000000841 471857 SACVD 3801 27 3828 Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) UP000001104 186772 SCV20 1 0 1 Saccharomyces 20S RNA narnavirus (ScNV-20S) UP000006968 1160507 SACAR 3652 1 3659 Saccharomyces arboricola (strain H-6 / AS 2.3317 / CBS 10644) (Yeast) UP000002311 559292 YEAST 6721 28 6757 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) UP000000306 764097 YEASA 3759 1 3786 Saccharomyces cerevisiae (strain AWRI796) (Baker's yeast) UP000000309 764102 YEASB 3678 1 3689 Saccharomyces cerevisiae (strain FostersB) (Baker's yeast) UP000007237 764101 YEASO 3559 1 3575 Saccharomyces cerevisiae (strain FostersO) (Baker's yeast) UP000007236 764098 YEASL 4007 1 4022 Saccharomyces cerevisiae (strain Lalvin QA23) (Baker's yeast) UP000000307 764099 YEASV 3914 2 3930 Saccharomyces cerevisiae (strain VIN 13) (Baker's yeast) UP000007238 764100 YEASZ 4013 1 4025 Saccharomyces cerevisiae (strain Zymaflore VL3) (Baker's yeast) UP000000351 11008 SCVLA 2 0 2 Saccharomyces cerevisiae virus L-A (ScV-L-A) (ScVL1) UP000002753 226230 SACK1 3743 2 3763 Saccharomyces kudriavzevii (strain ATCC MYA-4449 / AS 2.2408 / CBS 8840 / NBRC 1802 / NCYC 2889) (Yeast) UP000001947 203122 SACD2 3988 11 4007 Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) UP000006728 405948 SACEN 6842 312 7197 Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338) UP000031419 28042 None 3196 26 3222 Saccharopolyspora rectivirgula UP000006281 1179773 SACES 8395 28 8427 Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) UP000037722 1415542 None 8354 61 8418 Saccharothrix sp. NRRL B-16348 UP000033409 1427391 None 5885 51 5941 Saccharothrix sp. ST-888 UP000005713 388399 None 4989 36 5067 Sagittula stellata E-37 UP000052090 990304 None 6 0 6 Saimiri sciureus papillomavirus 1 UP000000587 10383 SHV21 75 2 78 Saimiriine herpesvirus 2 (strain 11) (SaHV-2) (Herpesvirus saimiri) UP000033140 698492 None 7115 3 7119 Saitoella complicata NRRL Y-17804 UP000051643 270918 None 3268 16 3286 Salegentibacter mishustinae UP000011746 1230341 None 2716 14 2732 Salimicrobium jeotgali UP000014072 1333523 None 2993 20 3013 Salinarchaeum sp. Harcht-Bsk1 UP000008674 309807 SALRD 2770 42 2833 Salinibacter ruber (strain DSM 13855 / M31) UP000034029 407035 None 2615 19 2644 Salinicoccus halodurans UP000028302 1304275 None 3784 23 3808 Salinisphaera hydrothermalis C41B8 UP000006242 1033802 None 3504 20 3524 Salinisphaera shabanensis E1L3A UP000018680 1307761 None 3334 16 3397 Salinispira pacifica UP000000235 369723 SALTO 4485 37 4536 Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) UP000033449 1406902 None 3009 18 3030 Salinivibrio sp. KP-1 UP000015347 1123237 None 5547 36 5621 Salipiger mucosus DSM 16094 UP000029742 651733 SALVA 1 0 1 Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A) UP000002084 41514 SALAR 4482 18 4510 Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) UP000004642 913241 None 5122 6 5128 Salmonella enterica subsp. enterica serovar Alachua str. R6-377 UP000048853 58097 None 4405 83 14513 Salmonella enterica subsp. enterica serovar Bovismorbificans UP000030047 1541887 None 75 0 138 Salmonella phage Chi UP000009070 1283336 BPFO1 246 1 247 Salmonella phage Felix O1 (isolate Felix O1-VT1) (Bacteriophage Felix O1) UP000014902 1340534 None 69 0 69 Salmonella phage Jersey UP000000339 867696 BPSAV 206 2 208 Salmonella phage ViI UP000001770 215158 BPE15 51 0 51 Salmonella phage epsilon15 UP000001014 99287 SALTY 4520 16 4558 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) UP000007799 946362 SALR5 11614 84 11708 Salpingoeca rosetta (strain ATCC 50818 / BSB-021) UP000034883 927083 None 8900 41 8961 Sandaracinus amylolyticus UP000000322 446469 SANKS 3686 24 3710 Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) UP000031980 1547597 None 2576 11 2587 Sanguibacteroides justesenii UP000007049 291175 SVSAP 3 1 4 Sapporo virus (isolate GI/Human/Germany/pJG-Sap01) (Hu/Dresden/pJG-Sap01/DE) UP000030762 1156394 None 17304 743 18100 Saprolegnia diclina VS20 UP000030745 695850 SAPPC 20051 1 20121 Saprolegnia parasitica (strain CBS 223.65) UP000007519 984262 SAPGL 4125 93 4251 Saprospira grandis (strain Lewin) UP000007648 9305 SARHA 18713 3675 22397 Sarcophilus harrisii (Tasmanian devil) (Sarcophilus laniarius) UP000000675 650481 SDVS5 2 0 2 Satsuma dwarf virus (isolate Satsuma mandarin/Japan/S-58/1977) (SDV) UP000005777 641146 None 1477 5 1482 Scardovia inopinata F0304 UP000006415 857290 None 1238 4 1243 Scardovia wiggsiae F0424 UP000028545 563466 None 8373 1 8375 Scedosporium apiospermum UP000002258 322104 PICST 5794 3 5818 Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis) UP000008854 6183 SCHMA 10716 1007 11774 Schistosoma mansoni (Blood fluke) UP000007431 578458 SCHCM 13119 9 13194 Schizophyllum commune (strain H4-8 / FGSC 9210) (Split gill fungus) UP000015464 653667 SCHCR 5132 18 5170 Schizosaccharomyces cryophilus (strain OY26 / ATCC MYA-4695 / CBS 11777 / NBRC 106824 / NRRL Y48691) (Fission yeast) UP000001744 402676 SCHJY 4851 1 4878 Schizosaccharomyces japonicus (strain yFS275 / FY16936) (Fission yeast) UP000002485 284812 SCHPO 5121 7 5147 Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) UP000028720 1453500 None 2296 5 2303 Schleiferia thermophila str. Yellowstone UP000034805 113540 None 24191 9 24226 Scleropages formosus (Asian bonytongue) UP000019487 1432307 None 10164 1 10166 Sclerotinia borealis F-4157 UP000001312 665079 SCLS1 14400 0 14427 Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum) UP000000395 686987 SSDRV 1 0 1 Sclerotinia sclerotiorum debilitation-associated virus (isolate Sclerotinia/China/Xie/-) (SsDRV) UP000031959 1233231 None 7001 77 7147 Scytonema tolypothrichoides VB-61278 UP000000845 526218 SEBTE 4112 12 4150 Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) UP000034410 1543721 None 3384 23 3417 Sedimenticola sp. SIP-G1 UP000002247 640132 SEGRD 2989 12 3006 Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578) UP000001514 88036 SELML 33103 47 34812 Selaginella moellendorffii (Spikemoss) UP000003701 585503 None 1978 42 2020 Selenomonas noxia ATCC 43541 UP000007887 927704 SELRL 3338 143 3512 Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) UP000011124 546271 SELS3 2224 19 3837 Selenomonas sputigena (strain ATCC 35185 / DSM 20758 / VPI D19B-28) UP000000570 11033 SFV 2 0 2 Semliki forest virus (SFV) UP000006563 302272 SENDO 9 2 11 Sendai virus (strain Ohita) (SeV) UP000000672 686944 SVV1 1 0 1 Seneca Valley virus (isolate -/United States/SSV-001/2002) (SVV) UP000008063 936435 SERL3 14338 1 14481 Serpula lacrymans var. lacrymans (strain S7.3) (Dry rot fungus) UP000034699 47917 SERFO 5056 30 5098 Serratia fonticola UP000005723 667129 None 4961 160 5121 Serratia odorifera DSM 4582 UP000007074 399741 SERP5 4901 29 4942 Serratia proteamaculans (strain 568) UP000017700 104623 SERS3 4378 29 4413 Serratia sp. (strain ATCC 39006) UP000017810 1410619 None 4027 1 4595 Serratia sp. DD3 UP000011072 932213 None 4747 41 4794 Serratia sp. M24T3 UP000042738 138074 None 3162 102 3397 Serratia symbiotica UP000013561 568817 None 672 0 672 Serratia symbiotica str. 'Cinara cedri' UP000004995 4555 SETIT 35715 3766 39612 Setaria italica (Foxtail millet) (Panicum italicum) UP000016935 671987 SETT2 11685 2 11698 Setosphaeria turcica (strain 28A) (Northern leaf blight fungus) (Exserohilum turcicum) UP000001663 31770 SHVX 6 0 6 Shallot virus X (ShVX) UP000009175 326297 SHEAM 3614 24 3645 Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) UP000001982 318161 SHEDO 3710 17 3754 Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) UP000000684 318167 SHEFN 3963 27 4029 Shewanella frigidimarina (strain NCIMB 400) UP000001558 323850 SHELP 3831 24 3859 Shewanella loihica (strain ATCC BAA-1088 / PV-4) UP000008186 211586 SHEON 3936 132 4196 Shewanella oneidensis (strain MR-1) UP000002608 398579 SHEPA 4149 32 4241 Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) UP000050414 1723761 None 4159 0 4159 Shewanella sp. P1-14-1 UP000029264 1515746 None 3355 29 3384 Shewanella sp. YQH10 UP000002350 637905 SHEVD 4330 6 4346 Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) UP000002168 392500 SHEWM 4839 26 4880 Shewanella woodyi (strain ATCC 51908 / MS32) UP000002716 300267 SHIDS 3837 60 4507 Shigella dysenteriae serotype 1 (strain Sd197) UP000003488 766154 None 9670 572 10313 Shigella flexneri 1235-66 UP000037951 1389006 None 3979 0 3981 Shimia sp. SK013 UP000001955 630626 SHIBC 3863 7 3904 Shimwellia blattae (strain ATCC 29907 / DSM 4481 / JCM 1650 / NBRC 105725 / CDC 9005-74) (Escherichia blattae) UP000017832 1410620 None 6510 809 7343 Shinella sp. DD12 UP000003494 626523 None 2217 30 2261 Shuttleworthia satelles DSM 14600 UP000032229 1454006 None 2728 16 2761 Siansivirga zeaxanthinifaciens CC-SAMT-1 UP000052109 1755588 None 1 0 1 Sicinivirus A UP000001625 580332 SIDLE 2962 15 2980 Sideroxydans lithotrophicus (strain ES-1) UP000001063 298339 SFVCP 5 1 6 Simian foamy virus (isolate chimpanzee) (SFVcpz) UP000007705 10633 SV40 6 3 9 Simian virus 40 (SV40) UP000000466 1117647 SIMAS 3793 19 3820 Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) UP000000496 331113 SIMNZ 2511 5 2518 Simkania negevensis (strain ATCC VR-1471 / Z) UP000017813 641147 None 2218 2 2275 Simonsiella muelleri ATCC 29453 UP000006710 11034 SINDV 3 0 3 Sindbis virus (SINV) UP000010798 886293 SINAD 7076 50 7251 Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) UP000030982 1338436 None 3424 20 3445 Sinomonas humi UP000032292 1385368 None 7947 75 8023 Skermanella aerolata KACC 11604 UP000019486 1385369 None 7211 58 7269 Skermanella stibiiresistens SB22 UP000002026 471855 SLAHD 2735 15 2765 Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) (Peptococcus heliotrinreducens) UP000006069 742818 None 1789 5 1799 Slackia piriformis YIT 12062 UP000004399 1111137 None 1807 2 1809 Slackia sp. CM382 UP000035039 1538639 None 1336 7 1343 Smithella sp. D17 UP000035018 1538640 None 1343 3 1346 Smithella sp. F21 UP000029283 1499107 None 2514 38 2636 Smithella sp. SCADC UP000051978 1735324 None 2568 19 2594 Smithella sp. SDB UP000033103 187101 None 1174 8 1183 Sneathia amnii UP000028323 1443103 None 1571 0 1620 Snodgrassella alvi SCGC AB-598-O02 UP000028439 1445515 None 1590 2 1617 Snodgrassella alvi SCGC AB-598-O11 UP000028206 1443104 None 1461 0 1498 Snodgrassella alvi SCGC AB-598-P14 UP000019668 1196094 None 2293 2 2299 Snodgrassella alvi wkB2 UP000001932 343509 SODGM 2486 4 2516 Sodalis glossinidius (strain morsitans) UP000019028 1239307 None 4157 18 4176 Sodalis praecaptivus UP000009270 652673 SBWMN 5 1 6 Soil-borne wheat mosaic virus (strain United States/Nebraska/1981) (SBWMV) UP000004994 4081 SOLLC 33870 86 34045 Solanum lycopersicum (Tomato) (Lycopersicon esculentum) UP000011115 4113 SOLTU 39129 13975 53376 Solanum tuberosum (Potato) UP000030856 2340 SOVGS 2644 13 2716 Solemya velum gill symbiont UP000006539 13686 SOLIN 14188 5 14193 Solenopsis invicta (Red imported fire ant) (Solenopsis wagneri) UP000006691 1002809 SOLSS 3768 44 3823 Solibacillus silvestris (strain StLB046) (Bacillus silvestris) UP000000671 234267 SOLUE 7728 33 7826 Solibacter usitatus (strain Ellin6076) UP000007590 929556 SOLCM 4278 26 4310 Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) (Flexibacter canadensis) UP000004097 706433 None 2007 27 2035 Solobacterium moorei F0204 UP000002139 448385 SORC5 9281 39 9359 Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain So ce56)) UP000001881 771870 SORMK 9882 8 9899 Sordaria macrospora (strain ATCC MYA-333 / DSM 997 / K(L3346) / K-hell) UP000000768 4558 SORBI 32783 16 32986 Sorghum bicolor (Sorghum) (Sorghum vulgare) UP000001671 652938 SBMVA 4 0 4 Southern bean mosaic virus (isolate Bean/United States/Arkansas) (SBMV) UP000029782 591166 STV 2 0 2 Southern tomato virus (STV) UP000001065 10651 SOCMV 9 0 9 Soybean chlorotic mottle virus UP000000709 619300 SPAPN 5972 1 5983 Spathaspora passalidarum (strain NRRL Y-27907 / 11-Y1) UP000002027 479434 SPHTD 3448 23 3485 Sphaerobacter thermophilus (strain DSM 20745 / S 6022) UP000007939 760011 SPHCD 1811 8 1822 Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) (Spirochaeta coccoides) UP000008466 158189 SPHGB 2991 16 3017 Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) (Spirochaeta sp. (strain Buddy)) UP000005632 158190 SPHPG 3131 19 3159 Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) UP000026714 1286631 None 4158 19 4178 Sphaerotilus natans subsp. natans DSM 6575 UP000016931 692275 SPHMS 10145 9 10156 Sphaerulina musiva (strain SO2202) (Poplar stem canker fungus) (Septoria musiva) UP000050993 1655600 None 2132 1 2133 Sphingobacteriales bacterium BACL12 MAG-120813-bin55 UP000016584 1346330 None 4191 29 4346 Sphingobacterium paucimobilis HER1398 UP000007808 743722 SPHS2 5099 33 5169 Sphingobacterium sp. (strain 21) UP000031802 1229276 None 3945 24 3969 Sphingobacterium sp. ACCC 05744 UP000034524 1643451 None 4654 33 4699 Sphingobacterium sp. Ag1 UP000034376 1338009 None 6005 14 6019 Sphingobacterium sp. IITKGP-BTPF85 UP000028992 1538644 None 4028 30 4093 Sphingobacterium sp. ML3W UP000006258 525373 None 4399 72 4471 Sphingobacterium spiritivorum ATCC 33861 UP000015524 1114964 None 4693 4 4807 Sphingobium baderi LL03 UP000007150 690566 None 4046 16 4072 Sphingobium chlorophenolicum L-1 UP000033874 56193 None 4922 32 4975 Sphingobium chungbukense UP000024284 1219045 SPHHM 3913 5 3922 Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC 16415 / MH) (Sphingomonas herbicidovorans) UP000007753 452662 SPHJU 4072 275 4394 Sphingobium japonicum (strain NBRC 101211 / UT26S) UP000013201 1301087 None 4653 17 4671 Sphingobium japonicum BiD32 UP000015525 1329909 None 3936 13 4033 Sphingobium quisquiliarum P25 UP000006480 1144307 None 4204 8 4212 Sphingobium sp. AP49 UP000021537 1461752 None 4124 25 4187 Sphingobium sp. Ant17 UP000018867 1207055 None 4490 23 4513 Sphingobium sp. C100 UP000051336 1735693 None 4270 14 4284 Sphingobium sp. Leaf26 UP000001275 627192 None 3993 57 4063 Sphingobium sp. SYK-6 UP000029094 1522072 None 4501 17 4548 Sphingobium sp. ba1 UP000015523 1346791 None 4450 12 4645 Sphingobium ummariense RL-3 UP000033202 1219043 None 3108 43 3152 Sphingomonas changbaiensis NBRC 104936 UP000032300 1609977 None 4184 27 4247 Sphingomonas hengshuiensis UP000032025 1219050 None 3900 95 3995 Sphingomonas paucimobilis NBRC 13935 UP000018851 1123269 None 6061 40 6211 Sphingomonas sanxanigenens DSM 19645 = NX02 UP000005395 314266 SPHSS 3888 4 3914 Sphingomonas sp. (strain SKA58) UP000033997 1642949 None 3549 16 3565 Sphingomonas sp. Ag1 UP000033201 104605 None 3072 12 3106 Sphingomonas sp. Ant20 UP000004402 473781 None 6142 35 6276 Sphingomonas sp. LH128 UP000051777 1735683 None 2903 5 2908 Sphingomonas sp. Leaf17 UP000051427 1736301 None 3303 17 3320 Sphingomonas sp. Leaf231 UP000051455 1736215 None 2975 7 2982 Sphingomonas sp. Leaf33 UP000051371 1736343 None 3459 18 3477 Sphingomonas sp. Leaf339 UP000051932 1736216 None 3428 10 3438 Sphingomonas sp. Leaf34 UP000051323 1736345 None 3232 10 3242 Sphingomonas sp. Leaf343 UP000051080 1736350 None 3508 16 3524 Sphingomonas sp. Leaf357 UP000051178 1736370 None 3070 14 3084 Sphingomonas sp. Leaf412 UP000051880 1736219 None 3337 15 3352 Sphingomonas sp. Leaf42 UP000011816 745310 None 4228 24 4361 Sphingomonas sp. MM-1 UP000051629 1736501 None 3696 19 3715 Sphingomonas sp. Root241 UP000051854 1736594 None 4398 24 4422 Sphingomonas sp. Root710 UP000051570 1736595 None 5006 38 5044 Sphingomonas sp. Root720 UP000033680 133190 None 4264 25 4317 Sphingomonas sp. SRS2 UP000033200 1549858 None 3380 21 3412 Sphingomonas taxi UP000001989 392499 SPHWW 5282 31 5345 Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) UP000006578 317655 SPHAL 3168 16 3195 Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) (Sphingomonas alaskensis) UP000030907 1515612 None 4783 14 4824 Sphingopyxis fribergensis UP000051141 1736474 None 4361 23 4384 Sphingopyxis sp. Root1497 UP000017881 1260251 None 1676 8 1684 Spiribacter salinus M19-40 UP000007383 889378 SPIAZ 2749 17 2782 Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) UP000002318 573413 SPISS 4177 34 4219 Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) UP000030022 1329640 None 2691 41 2732 Spirochaeta sp. JC202 UP000029692 1480694 None 2272 13 2303 Spirochaeta sp. JC230 UP000007254 869211 SPITZ 2236 13 2264 Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) UP000050987 1704237 None 3672 53 3725 Spirochaetes bacterium DG_61 UP000018208 348837 None 8098 0 8333 Spironucleus salmonicida UP000018550 1276258 None 990 2 997 Spiroplasma apis B31 UP000019267 1276246 None 1069 2 1071 Spiroplasma culicicola AES-1 UP000014983 1276221 None 833 25 858 Spiroplasma diminutum CUAS-1 UP000035661 743698 None 1156 24 1180 Spiroplasma eriocheiris CCTCC M 207170 UP000004057 570509 None 1150 4 1197 Spiroplasma melliferum KC3 UP000031565 2138 None 1610 27 2146 Spiroplasma poulsonii UP000019265 1276257 None 923 1 924 Spiroplasma sabaudiense Ar-1343 UP000013963 1276229 None 1006 0 1006 Spiroplasma syrphidicola EA-1 UP000014984 1276220 None 980 27 1007 Spiroplasma taiwanense CT-1 UP000002101 10855 SPV4 9 0 9 Spiroplasma virus 4 (SpV4) UP000001764 185959 SPV1C 13 0 13 Spiroplasma virus SpV1-C74 (SpV1) UP000001252 10854 SPV1R 12 0 12 Spiroplasma virus SpV1-R8A2 B (SpV1) (Spiroplasma virus 1) UP000002028 504472 SPILD 6836 31 6938 Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) UP000008030 113370 SFAVA 123 0 123 Spodoptera frugiperda ascovirus 1a (SfAV-1a) UP000035013 1620392 None 3182 10 3210 Spongiibacter sp. IMCC21906 UP000008867 999809 SPORE 6668 5 6673 Sporisorium reilianum (strain SRZ2) (Maize head smut fungus) UP000030185 153721 None 5022 20 5042 Sporocytophaga myxococcoides UP000035553 1069536 None 2640 28 2668 Sporolactobacillus inulinus CASD UP000018296 1395513 None 3463 34 3497 Sporolactobacillus laevolacticus DSM 442 UP000049855 411922 None 5190 61 5263 Sporomusa sp. An4 UP000005316 1027292 None 3808 17 3825 Sporosarcina newyorkensis 2681 UP000018087 1391915 SPOS1 8672 1 8674 Sporothrix schenckii (strain ATCC 58251 / de Perez 2211183) (Rose-picker's disease fungus) UP000014978 1358809 SPRLO 2499 0 2499 Spraguea lophii (strain 42_110) (Microsporidian parasite) UP000029769 1559360 SVCVA 5 0 5 Spring viraemia of carp virus (strain ATCC VR-1390) UP000001863 543939 SPTNK 21 0 21 Sputnik virophage UP000028524 1283841 None 10675 1 10676 Stachybotrys chlorohalonata IBT 40285 UP000000844 446470 STANL 6335 44 6379 Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) UP000010473 111780 STAC7 4707 44 4781 Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) UP000008816 93061 STAA8 2881 8 2898 Staphylococcus aureus (strain NCTC 8325) UP000024810 1413510 None 2799 17 2818 Staphylococcus aureus C0673 UP000000444 396513 STACT 2411 49 2462 Staphylococcus carnosus (strain TM300) UP000000531 176279 STAEQ 2488 4 2519 Staphylococcus epidermidis (strain ATCC 35984 / RP62A) UP000009885 1229783 None 2308 15 2324 Staphylococcus massiliensis S46 UP000008944 904314 None 2342 3 2345 Staphylococcus pettenkoferi VCU012 UP000001539 215167 None 67 0 67 Staphylococcus phage 3A UP000007462 204086 BP44A 21 0 21 Staphylococcus phage 44AHJD UP000002103 259901 None 69 0 69 Staphylococcus phage 77 UP000001466 1283338 BPTWO 195 0 195 Staphylococcus phage Twort (strain DSM 17442) (Bacteriophage Twort) UP000008925 106284 None 66 0 66 Staphylococcus phage phiETA UP000007469 937773 STAPH 2436 13 2450 Staphylococcus pseudintermedius (strain HKU10-03) UP000006371 342451 STAS1 2399 5 2408 Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) UP000018360 1262969 None 1472 4 1476 Staphylococcus sp. CAG:324 UP000000254 399550 STAMF 1566 4 1570 Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1) UP000006633 639283 STAND 4392 32 4431 Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) UP000050940 659018 None 2798 7 2806 Stenotrophomonas daejeonensis UP000050864 405444 None 3485 8 3499 Stenotrophomonas humi UP000051254 266128 None 2592 5 2598 Stenotrophomonas koreensis UP000008840 522373 STRMK 4316 49 4384 Stenotrophomonas maltophilia (strain K279a) UP000051802 676599 None 3392 11 3403 Stenotrophomonas panacihumi UP000001351 378806 STIAD 8229 78 12237 Stigmatella aurantiaca (strain DW4/3-1) UP000018466 796942 None 2060 10 2071 Stomatobaculum longum UP000002072 519441 STRM9 1424 7 1442 Streptobacillus moniliformis (strain ATCC 14647 / DSM 12112 / NCTC 10651 / 9901) UP000018482 1154860 None 2166 13 2186 Streptococcus agalactiae LMG 14747 UP000000821 208435 STRA5 2103 2 2123 Streptococcus agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R) UP000041669 148942 None 4598 69 411045 Streptococcus equi subsp. equi UP000001368 553483 STRS7 1838 13 1869 Streptococcus equi subsp. zooepidemicus (strain H70) UP000001131 467705 STRGC 2041 9 2051 Streptococcus gordonii (strain Challis / ATCC 35105 / BCRC 15272 / CH1 / DL1 / V288) UP000003330 764299 None 2391 6 2473 Streptococcus ictaluri 707-05 UP000003291 871237 None 2095 7 2102 Streptococcus infantis SK1302 UP000005460 1035189 None 2138 6 2144 Streptococcus infantis SK970 UP000017720 1273539 None 2131 14 2145 Streptococcus iniae IUSA1 UP000016233 862967 None 1810 2 1815 Streptococcus intermedius B196 UP000015268 1076934 None 1859 13 1890 Streptococcus lutetiensis 033 UP000002512 210007 STRMU 1949 4 1961 Streptococcus mutans serotype c (strain ATCC 700610 / UA159) UP000000997 90410 None 44 0 44 Streptococcus phage DT1 UP000014703 1208587 None 104 0 104 Streptococcus phage SPQS1 UP000002581 78541 None 51 0 51 Streptococcus phage Sfi11 UP000000586 171101 STRR6 1876 154 2035 Streptococcus pneumoniae (strain ATCC BAA-255 / R6) UP000002642 914141 None 2810 13 2850 Streptococcus pneumoniae 2070335 UP000003388 760811 None 2472 15 2514 Streptococcus pneumoniae GA41410 UP000000750 301447 STRP1 1690 0 2116 Streptococcus pyogenes serotype M1 UP000016617 1227275 None 2203 7 2210 Streptococcus sobrinus W1703 UP000015934 1316409 None 2154 6 2160 Streptococcus sp. HSISB1 UP000015933 1316408 None 2202 17 2226 Streptococcus sp. HSISM1 UP000004514 904294 None 1948 9 1963 Streptococcus sp. oral taxon 056 str. F0418 UP000000243 391295 STRSY 2170 8 2186 Streptococcus suis (strain 05ZYH33) UP000001170 264199 STRT2 1561 16 1591 Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) UP000004150 1042404 None 1884 5 1891 Streptococcus thermophilus CNCM I-1630 UP000000449 218495 STRU0 1747 13 1762 Streptococcus uberis (strain ATCC BAA-854 / 0140J) UP000005388 764291 None 2197 9 2207 Streptococcus urinalis 2285-97 UP000031675 183763 None 4275 32 4307 Streptomonospora alba UP000037151 42234 None 7843 98 7941 Streptomyces acidiscabies UP000015001 1283301 None 8929 80 9034 Streptomyces afghaniensis 772 UP000026918 68570 STRA9 7980 89 8086 Streptomyces albulus UP000031523 1081613 STRA4 7255 67 7330 Streptomyces albus (strain ATCC 21838 / DSM 41398 / FERM P-419 / JCM 4703 / NBRC 107858) UP000014629 1286094 None 7684 66 7750 Streptomyces aurantiacus JA 4570 UP000009036 1160718 None 6642 78 6721 Streptomyces auratus AGR0001 UP000000428 227882 STRAW 7635 29 7673 Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) UP000000377 749414 STRBB 9925 94 10022 Streptomyces bingchenggensis (strain BCW-1) UP000037288 1678637 None 5388 72 5481 Streptomyces caatingaensis UP000037773 36816 None 6809 73 6884 Streptomyces caelestis UP000007842 1003195 STREN 7527 10 7570 Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) UP000002357 443255 STRC2 7251 39 10072 Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) UP000001973 100226 STRCO 8005 34 8154 Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) UP000015423 1214242 STRC3 6617 65 7115 Streptomyces collinus (strain DSM 40733 / Tu 365) UP000032234 477245 None 5767 62 5830 Streptomyces cyaneogriseus subsp. noncyanogenus UP000008043 1214101 None 8499 54 8616 Streptomyces davawensis JCM 4913 UP000028058 1906 STRFR 6172 7 6179 Streptomyces fradiae (Streptomyces roseoflavus) UP000003824 566461 None 7788 77 7889 Streptomyces ghanaensis ATCC 14672 UP000029482 1907 STRGA 6527 23 6567 Streptomyces glaucescens UP000003022 996637 None 6771 68 6839 Streptomyces griseoaurantiacus M045 UP000002968 467200 None 6272 65 6338 Streptomyces griseoflavus Tu4000 UP000001685 455632 STRGG 6968 40 7136 Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) UP000003963 457427 None 9105 72 9194 Streptomyces himastatinicus ATCC 53653 UP000007170 1133850 STRHJ 8936 110 9108 Streptomyces hygroscopicus subsp. jinggangensis (strain 5008) UP000010411 698759 None 9337 31 9472 Streptomyces ipomoeae 91-03 UP000033551 68223 None 7240 62 7305 Streptomyces katrae UP000032413 1403539 None 8425 75 8518 Streptomyces lydicus A02 UP000034196 1428628 None 7656 76 7732 Streptomyces mangrovisoli UP000011740 1223523 None 6346 76 6422 Streptomyces mobaraensis NBRC 13819 = DSM 40847 UP000017971 1352941 None 7679 67 7799 Streptomyces niveus NCIMB 11891 UP000031526 40318 None 5800 63 5881 Streptomyces nodosus UP000002124 10719 BPPHC 53 0 53 Streptomyces phage phiC31 (Bacteriophage phi-C31) UP000031501 1355015 None 12253 146 16485 Streptomyces pluripotens UP000002066 591167 STRFA 6492 66 6572 Streptomyces pratensis (strain ATCC 33331 / IAF-45CD) UP000002805 457429 None 6811 55 6869 Streptomyces pristinaespiralis ATCC 25486 UP000011074 1265868 None 8318 91 8411 Streptomyces rimosus subsp. rimosus ATCC 10970 UP000017984 1352936 None 8784 101 8942 Streptomyces roseochromogenus subsp. oscitans DS 12.976 UP000033699 359131 None 6208 59 6268 Streptomyces rubellomurinus UP000001444 680198 STRSW 8635 65 8744 Streptomyces scabiei (strain 87.22) UP000002779 465543 STRSH 5608 45 5741 Streptomyces sp. (strain SPB074) UP000031584 1576605 None 6955 131 7087 Streptomyces sp. 150FB UP000003970 591158 None 8319 75 8419 Streptomyces sp. AA4 UP000037758 1519489 None 8029 99 8130 Streptomyces sp. AS58 UP000031567 352211 None 6749 159 6908 Streptomyces sp. AcH 505 UP000005763 253839 None 7470 58 7540 Streptomyces sp. C UP000034283 444103 None 6309 58 6407 Streptomyces sp. CNQ-509 UP000014410 1078086 None 8272 97 8490 Streptomyces sp. HGB0020 UP000037687 1415544 None 7472 96 7569 Streptomyces sp. MMG1121 UP000037741 1415546 None 8384 92 8480 Streptomyces sp. MMG1533 UP000033891 1428620 None 8538 96 8640 Streptomyces sp. MUSC119T UP000034838 1428626 None 6575 72 6649 Streptomyces sp. MUSC136T UP000033569 1609137 None 5607 56 5663 Streptomyces sp. NRRL F-4428 UP000037743 1519495 None 6039 62 6105 Streptomyces sp. NRRL F-6491 UP000037856 1609099 None 11691 149 11843 Streptomyces sp. NRRL F-6602 UP000033406 1609134 None 7968 53 8021 Streptomyces sp. NRRL S-444 UP000033484 1609133 None 7220 53 7273 Streptomyces sp. NRRL S-495 UP000037738 1519490 None 7242 72 7317 Streptomyces sp. NRRL WC-3618 UP000027475 1487711 None 6038 65 6134 Streptomyces sp. NTK 937 UP000017765 1223307 None 5832 62 6004 Streptomyces sp. PVA 94-07 UP000031573 1571774 None 7345 55 7447 Streptomyces sp. RSD-27 UP000020060 1470557 None 6738 68 6806 Streptomyces sp. Tu 6176 UP000003955 355249 None 6591 44 6642 Streptomyces sp. Tu6071 UP000037699 1415551 None 6224 51 6279 Streptomyces sp. WM4235 UP000037774 1415557 None 7414 70 7488 Streptomyces sp. WM6378 UP000033641 1415558 None 8049 94 8143 Streptomyces sp. WM6386 UP000004704 645465 None 6125 56 6193 Streptomyces sp. e14 UP000002785 463191 None 8115 87 8205 Streptomyces sviceus ATCC 29083 UP000028341 55952 STRTO 6244 71 6315 Streptomyces toyocaensis UP000005940 1114943 None 6627 57 6684 Streptomyces tsukubensis NRRL18488 UP000010931 698760 None 10006 28 10069 Streptomyces turgidiscabies Car8 UP000037020 67373 None 8600 43 8644 Streptomyces varsoviensis UP000006854 953739 STRVP 7382 69 7453 Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) UP000008703 653045 None 8853 88 8985 Streptomyces violaceusniger Tu 4113 UP000037432 1938 STRVR 8765 30 8803 Streptomyces viridochromogenes UP000004184 591159 STRVT 7621 85 7712 Streptomyces viridochromogenes (strain DSM 40736 / JCM 4977 / BCRC 1201 / Tue 494) UP000050867 76728 None 5089 43 5181 Streptomyces vitaminophilus UP000034034 408015 None 5445 46 5491 Streptomyces xiamenensis UP000004217 700597 None 7489 88 7579 Streptomyces zinciresistens K42 UP000017915 1380770 None 5095 37 5200 Streptomycetaceae bacterium MP113-05 UP000002029 479432 STRRD 8861 94 8975 Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) UP000014500 126957 STRMM 14947 25 15005 Strigamia maritima (European centipede) (Geophilus maritimus) UP000015354 28005 None 9985 1 12083 Strigomonas culicis UP000000414 35297 SJNNV 3 0 3 Striped jack nervous necrosis virus (SjNNV) UP000007110 7668 STRPU 28478 121 28937 Strongylocentrotus purpuratus (Purple sea urchin) UP000046392 174720 STREA 18207 25 18232 Strongyloides papillosus (Intestinal threadworm) UP000035682 34506 STRRB 9942 14 9989 Strongyloides ratti (Parasitic roundworm) UP000035681 6248 STRER 12823 28 12851 Strongyloides stercoralis (Threadworm) UP000035680 75913 None 16597 27 16624 Strongyloides venezuelensis UP000039865 5949 STYLE 20720 0 20740 Stylonychia lemnae (Ciliate) UP000003855 665956 None 4074 14 4105 Subdoligranulum sp. 4_3_54A2FAA UP000017993 1262970 None 1340 1 1341 Subdoligranulum sp. CAG:314 UP000003438 411471 None 3327 51 3381 Subdoligranulum variabile DSM 15176 UP000006543 291607 SCSVF 8 0 8 Subterranean clover stunt virus (strain F) (SCSV) UP000018458 762983 None 2134 35 2169 Succinatimonas hippei YIT 12066 UP000018241 1262974 None 1955 15 1970 Succinatimonas sp. CAG:777 UP000000781 444179 SULMW 226 1 227 Sulcia muelleri (strain GWSS) UP000027734 1300350 None 3405 11 3417 Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565 UP000027337 83219 None 3632 17 3649 Sulfitobacter mediterraneus UP000027746 1402135 None 4651 28 4680 Sulfitobacter pseudonitzschiae UP000028921 1525218 None 3546 17 3563 Sulfitobacter sp. CB2047 UP000000291 1051632 SULAT 3567 155 3754 Sulfobacillus acidophilus (strain TPY) UP000001018 330779 SULAC 2187 34 2221 Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) UP000007017 654908 SIFVH 73 0 73 Sulfolobus islandicus filamentous virus (isolate Iceland/Hveragerdi) (SIFV) UP000002270 157898 SIRV1 43 0 45 Sulfolobus islandicus rod-shaped virus 1 (SIRV-1) (Sulfolobus virus SIRV-1) UP000001974 273057 SULSO 2924 14 2995 Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) UP000000854 244589 SSV1 34 0 34 Sulfolobus spindle-shape virus 1 (SSV1) UP000001015 273063 SULTO 2762 43 2813 Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) UP000015559 1163617 None 3019 52 3073 Sulfuricella denitrificans skB26 UP000008721 709032 SULKY 2780 14 2798 Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) UP000031979 1539066 None 2040 14 2054 Sulfuricurvum sp. PC08-66 UP000001369 204536 SULAA 1703 5 1725 Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) UP000001201 436114 SULSY 1705 7 1721 Sulfurihydrogenibium sp. (strain YO3AOP1) UP000007803 563040 SULAO 2152 3 2158 Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10) UP000002714 326298 SULDN 2081 3 2096 Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) (Thiomicrospira denitrificans (strain ATCC 33889 / DSM 1251)) UP000006431 929558 SULGG 2863 2 2874 Sulfurimonas gotlandica (strain DSM 19862 / JCM 16533 / GD1) UP000031637 1223802 None 3542 36 3587 Sulfuritalea hydrogenivorans sk43H UP000002222 525898 SULD5 2239 4 2265 Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175) UP000006378 387093 SULNB 2424 9 2438 Sulfurovum sp. (strain NBC37-1) UP000003180 1165841 None 2100 14 2114 Sulfurovum sp. AR UP000031941 1539062 None 2264 184 2481 Sulfurovum sp. AS07-7 UP000031944 1539064 None 2261 58 2327 Sulfurovum sp. FS06-10 UP000031940 1539063 None 1865 71 1936 Sulfurovum sp. PC08-66 UP000008227 9823 PIG 21256 4965 26646 Sus scrofa (Pig) UP000052081 446138 None 5 0 5 Sus scrofa papillomavirus 1 UP000004956 762967 None 2478 5 2483 Sutterella parvirubra YIT 11816 UP000018107 1262975 None 2200 2 2202 Sutterella sp. CAG:351 UP000018105 1262976 None 1801 3 1804 Sutterella sp. CAG:397 UP000018289 1262977 None 1627 5 1632 Sutterella sp. CAG:521 UP000005835 742823 None 2323 4 2369 Sutterella wadsworthensis 2_1_59BFAA UP000018089 1263111 None 2399 11 2410 Sutterella wadsworthensis CAG:135 UP000007084 652105 SPMMV 1 0 1 Sweet potato mild mottle virus (isolate Salazar) (SPMMV) UP000000871 300880 SWPV1 146 0 146 Swinepox virus (strain Swine/Nebraska/17077-99/1999) (SWPV) UP000000417 292459 SYMTH 3298 15 3333 Symbiobacterium thermophilum (strain T / IAM 14863) UP000002717 1140 SYNE7 2641 17 2662 Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2) UP000010379 195253 SYNP3 3519 22 3545 Synechococcus sp. (strain ATCC 27167 / PCC 6312) UP000001688 32049 SYNP2 3092 87 3187 Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum quadruplicatum) UP000001938 321332 SYNJB 2829 6 2863 Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium Yellowstone B-Prime) UP000001115 316278 SYNR3 2441 87 2531 Synechococcus sp. (strain RCC307) UP000001566 32051 SYNPW 2439 91 2533 Synechococcus sp. (strain WH7803) UP000001422 84588 SYNPX 2491 21 2515 Synechococcus sp. (strain WH8102) UP000035901 1662190 None 1734 15 1780 Synechococcus sp. GFB01 UP000005766 91464 None 5422 53 5586 Synechococcus sp. PCC 7335 UP000010385 1173263 None 3286 24 3318 Synechococcus sp. PCC 7502 UP000004972 221359 None 2932 23 2961 Synechococcus sp. RS9916 UP000005593 221360 None 2719 29 2770 Synechococcus sp. RS9917 UP000002935 69042 None 3281 35 3345 Synechococcus sp. WH 5701 UP000001425 1111708 SYNY3 3424 83 3566 Synechocystis sp. (strain PCC 6803 / Kazusa) UP000027665 2754 None 2465 16 2501 Synergistes jonesii UP000003380 457415 None 2937 20 2960 Synergistes sp. 3_1_syn1 UP000046155 499207 None 3085 82 3176 Syntrophaceticus schinkii UP000001784 335543 SYNFM 3985 27 4064 Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) UP000051215 1703361 None 1259 14 1274 Syntrophobacter sp. DG_60 UP000007488 645991 SYNGF 3079 26 3251 Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) UP000001968 335541 SYNWW 2455 18 2504 Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) UP000045545 690567 None 2611 20 2773 Syntrophomonas zehnderi OL-4 UP000000378 643648 SYNLT 2298 13 2313 Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) UP000001933 56780 SYNAS 3116 29 3163 Syntrophus aciditrophicus (strain SB) UP000046393 451379 None 10175 20 10195 Syphacia muris UP000008026 928313 TACVF 4 0 4 Tacaribe virus (strain Franze-Fernandez) (TCRV) UP000046400 60517 TAEAS 8843 5 8848 Taenia asiatica (Asian tapeworm) UP000007754 59729 TAEGU 17150 992 18229 Taeniopygia guttata (Zebra finch) (Poephila guttata) UP000005226 31033 TAKRU 18492 29377 47981 Takifugu rubripes (Japanese pufferfish) (Fugu rubripes) UP000001294 441960 TALMQ 10026 422 10470 Talaromyces marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) (Penicillium marneffei) UP000001745 441959 TALSN 12466 556 13038 Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) (Penicillium stipitatum) UP000032361 1382798 None 3009 20 3202 Tamlana nanhaiensis UP000005436 203275 TANFA 2975 3 3002 Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) (Bacteroides forsythus) UP000018396 1262978 None 2908 12 2920 Tannerella sp. CAG:118 UP000018150 1262979 None 2578 8 2586 Tannerella sp. CAG:51 UP000034982 1411022 None 2309 2 2371 Tannerella sp. oral taxon BU063 isolate Cell 1/3 UP000032679 1231623 None 3136 18 3154 Tanticharoenia sakaeratensis NBRC 103193 UP000013776 1097556 TAPDE 4650 9 4662 Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) (Peach leaf curl fungus) (Lalaria deformans) UP000031171 1577905 None 3965 18 3983 Tateyamaria sp. ANG-S1 UP000032414 451 TATMI 2941 48 2998 Tatlockia micdadei (Legionella micdadei) UP000028602 1005995 None 3328 9 3340 Tatumella ptyseos ATCC 33301 UP000007472 937774 TAYEM 1555 1 1556 Taylorella equigenitalis (strain MCE9) UP000010802 1209989 TEPAE 2561 79 2645 Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) UP000028702 1333998 None 3389 9 3401 Tepidicaulis marinus UP000009080 377629 TERTT 4240 9 4255 Teredinibacter turnerae (strain ATCC 39867 / T7901) UP000033603 1619947 None 3779 33 3812 Terrabacter sp. 28 UP000027980 586416 None 3200 30 3230 Terribacillus aidingensis UP000006056 926566 TERRK 3919 17 4245 Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) UP000006844 401053 TERSS 4158 19 4180 Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) UP000031189 1577792 None 3412 37 3449 Terrisporobacter othiniensis UP000002663 945021 TETHN 2444 63 2555 Tetragenococcus halophilus (strain DSM 20338 / JCM 20259 / NCIMB 9735 / NBRC 12172) (Pediococcus halophilus) UP000029381 1302648 None 2243 19 2262 Tetragenococcus muriaticus 3MR10-3 UP000009168 312017 TETTS 26971 5 27004 Tetrahymena thermophila (strain SB210) UP000015104 32264 TETUR 18065 17 18223 Tetranychus urticae (Two-spotted spider mite) UP000007303 99883 TETNG 19533 3542 23131 Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis) UP000002866 1071380 TETBL 5385 0 5389 Tetrapisispora blattae (strain ATCC 34711 / CBS 6284 / DSM 70876 / NBRC 10599 / NRRL Y-10934 / UCD 77-7) (Yeast) (Kluyveromyces blattae) UP000005666 1071381 TETPH 5238 0 5253 Tetrapisispora phaffii (strain ATCC 24235 / CBS 4417 / NBRC 1672 / NRRL Y-8282 / UCD 70-5) (Yeast) (Fabospora phaffii) UP000035763 1193182 None 4084 78 4233 Tetrasphaera australiensis Ben110 UP000013167 1193181 None 3033 56 3106 Tetrasphaera elongata Lp2 UP000035721 1194083 None 4485 110 4671 Tetrasphaera japonica T1-X7 UP000035720 1193518 None 3657 58 3816 Tetrasphaera jenkinsii Ben 74 UP000051616 1736399 None 3080 24 3105 Tetrasphaera sp. Soil756 UP000007974 159749 THAOC 34547 0 34636 Thalassiosira oceanica (Marine diatom) UP000001449 35128 THAPS 11706 12 11784 Thalassiosira pseudonana (Marine diatom) (Cyclotella nana) UP000029829 1225651 None 3315 30 3345 Thalassobacter sp. 16PALIMAR09 UP000004701 633131 None 3663 9 3696 Thalassobium sp. R2A62 UP000051587 53501 THAGE 3762 2 3770 Thalassobius gelatinovorus (Ruegeria gelatinovora) UP000051681 340021 None 3260 0 3316 Thalassobius mediterraneus UP000051184 1715690 None 3405 1 3411 Thalassobius sp. CECT 5114 UP000011866 1298593 None 3624 10 3662 Thalassolituus oleivorans MIL-1 UP000032568 485447 None 5425 35 5461 Thalassomonas actiniarum UP000007127 1123366 None 4323 17 4351 Thalassospira xiamenensis M-5 = DSM 17429 UP000029848 1535422 None 3924 22 3953 Thalassotalea sp. ND16A UP000011668 983506 THACA 10482 0 10489 Thanatephorus cucumeris (strain AG1-IA) (Rice sheath blight fungus) (Rhizoctonia solani) UP000012065 1108050 THACB 11586 611 12268 Thanatephorus cucumeris (strain AG1-IB / isolate 7/3/14) (Lettuce bottom rot fungus) (Rhizoctonia solani) UP000013232 1123367 None 3803 33 3843 Thauera linaloolentis 47Lol = DSM 12138 UP000002186 85643 THASP 3905 22 3978 Thauera sp. (strain MZ1T) UP000013140 305700 None 4231 40 4298 Thauera sp. 27 UP000013007 497321 None 3936 19 4008 Thauera sp. 63 UP000015455 1348657 None 3785 28 3814 Thauera terpenica 58Eu UP000051388 1640512 None 1635 16 1652 Thaumarchaeota archaeon CSP1-1 UP000001950 5874 THEAN 3790 0 3795 Theileria annulata UP000031512 1537102 None 5313 0 5329 Theileria equi strain WA UP000003786 869250 None 3989 0 3995 Theileria orientalis strain Shintoku UP000001949 5875 THEPA 4071 0 4082 Theileria parva (East coast fever infection agent) UP000046394 103827 THECL 9982 15 9997 Thelazia callipaeda (Oriental eyeworm) (Parasitic nematode) UP000031668 669202 THEKT 14792 0 15020 Thelohanellus kitauei (Myxosporean) UP000026915 3641 THECC 29136 11479 40644 Theobroma cacao (Cacao) (Cocoa) UP000000467 1089553 THEPS 2790 13 2824 Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) UP000008915 644966 THEM7 2315 9 2327 Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) UP000050544 869279 None 2371 23 2395 Thermanaerothrix daxensis UP000002030 525903 THEAS 1729 8 1738 Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) (Selenomonas acidaminovorans) UP000002377 635013 THEPJ 2882 26 2949 Thermincola potens (strain JR) UP000029276 1535750 None 2300 13 2315 Thermoactinomyces sp. Gus2-1 UP000037969 2026 THEVU 3795 25 3820 Thermoactinomyces vulgaris UP000002156 340099 THEP3 2183 10 2243 Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) (Clostridium thermohydrosulfuricum) UP000006178 1094508 THESW 2762 16 2783 Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) UP000027284 1312852 None 2234 18 2253 Thermoanaerobaculum aquaticum UP000010795 717605 THECK 3778 24 3858 Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) UP000000323 525904 THET1 2813 14 2832 Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) UP000000434 269800 THEFY 3071 14 3087 Thermobifida fusca (strain YX) UP000006640 469371 THEBD 3507 38 3546 Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) UP000014923 941824 None 2354 16 2381 Thermobrachium celere DSM 8682 UP000007478 391623 THEBM 2253 12 2265 Thermococcus barophilus (strain DSM 11836 / MP) UP000000536 69014 THEKO 2290 11 2305 Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) (Pyrococcus kodakaraensis (strain KOD1)) UP000002043 638303 THEAH 1578 14 1593 Thermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12) UP000006793 667014 THEID 2168 16 2195 Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) UP000028481 289377 None 1421 9 1453 Thermodesulfobacterium commune DSM 2178 UP000006583 795359 THEGP 1587 7 1596 Thermodesulfobacterium geofontis (strain OPF15) UP000011765 747365 None 1790 7 1807 Thermodesulfobium narugense DSM 14796 UP000000718 289376 THEYD 1970 12 2033 Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) UP000000641 368408 THEPD 1870 6 1876 Thermofilum pendens (strain Hrk 5) UP000005270 1184251 THEC1 1409 5 1414 Thermogladius cellulolyticus (strain 1633) UP000000447 309801 THERP 2824 34 2859 Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) UP000001918 471852 THECD 4847 41 4890 Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) UP000001024 273075 THEAC 1481 1 1483 Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) UP000018337 667135 None 2267 9 2280 Thermoplasmatales archaeon A-plasma UP000012076 1054217 None 1525 3 1528 Thermoplasmatales archaeon BRNA1 UP000018052 667137 None 1655 6 1674 Thermoplasmatales archaeon E-plasma UP000018202 261391 None 1904 13 1923 Thermoplasmatales archaeon Gpl UP000017931 667138 None 1685 8 1696 Thermoplasmatales archaeon I-plasma UP000033636 1609232 None 1697 5 1703 Thermoproteus sp. AZ2 UP000002654 768679 THETK 1950 97 2049 Thermoproteus tenax (strain ATCC 35583 / NBRC 100435 / JCM 9277 / Kra 1) UP000009250 10480 TTV1K 37 0 37 Thermoproteus tenax virus 1 (strain KRA1) (TTV1) UP000000272 555079 THEOJ 2137 14 2197 Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) UP000005139 401526 None 2706 32 2750 Thermosinus carboxydivorans Nor1 UP000001110 391009 THEM4 1871 6 1879 Thermosipho melanesiensis (strain DSM 12029 / CIP 104789 / BI429) UP000002376 633148 THEAM 1383 4 1387 Thermosphaera aggregans (strain DSM 11486 / M11TL) UP000000440 197221 THEEB 2431 20 2474 Thermosynechococcus elongatus (strain BP-1) UP000008183 243274 THEMA 1851 1 2871 Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) UP000006362 648996 THEA1 1803 9 1813 Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) UP000005868 580340 THELD 1836 17 1875 Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) UP000001132 466051 None 117 0 117 Thermus phage P2345 UP000000532 300852 THET8 2216 11 2239 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) UP000000958 1714272 None 37 0 37 Thermus thermophilus bacteriophage P23-77 UP000008181 578455 THITE 9759 1 9802 Thielavia terrestris (strain ATCC 38088 / NRRL 8126) (Acremonium alabamense) UP000033483 72032 None 5253 1 5296 Thielaviopsis punctulata UP000005380 717772 None 2062 5 2071 Thioalkalimicrobium aerophilum AL3 UP000010809 1255043 THIND 3742 22 3780 Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) UP000009099 396595 THISK 2807 16 2855 Thioalkalivibrio sp. (strain K90mix) UP000002383 396588 THISH 3249 23 3283 Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) UP000008291 292415 THIDA 2816 10 2827 Thiobacillus denitrificans (strain ATCC 25259) UP000005459 768671 None 4871 44 4924 Thiocapsa marina 5811 UP000027725 1185766 None 3991 16 4009 Thioclava dalianensis UP000028607 1317124 None 3744 23 3770 Thioclava sp. 13D2W-2 UP000027471 1353528 None 3653 18 3672 Thioclava sp. DT23-4 UP000006062 765911 THIV6 4152 40 4330 Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium violascens) UP000010816 765912 None 3496 32 3562 Thioflavicoccus mobilis 8321 UP000031631 1076588 None 2814 10 2841 Thiolapillus brandeum UP000002713 317025 THICR 2184 3 2196 Thiomicrospira crunogena (strain XCL-2) UP000002185 75379 THIK1 3114 20 3172 Thiomonas intermedia (strain K12) (Thiobacillus intermedius) UP000031623 40754 None 3933 18 3964 Thioploca ingrica UP000004200 765913 None 4684 47 4733 Thiorhodococcus drewsii AZ1 UP000003058 765914 None 2908 25 2959 Thiorhodospira sibirica ATCC 700588 UP000002964 631362 None 4645 46 4701 Thiorhodovibrio sp. 970 UP000005317 870187 None 4191 27 4329 Thiothrix nivea DSM 5205 UP000051903 1703416 None 3093 89 3183 Thiotrichales bacterium SG8_50 UP000005330 1177931 None 2103 1 2104 Thiovulum sp. ES UP000008973 126796 THOGV 7 0 7 Thogoto virus (isolate SiAr 126) (Tho) UP000011786 572290 THCOV 9 0 9 Thrush coronavirus HKU12 (isolate Grey-backed thrush/Hong Kong/HKU12-600/2007) (ThCoV-HKU12) (Thrush coronavirus HKU12-600) UP000029770 1559361 TIBVC 9 0 9 Tibrogargan virus (strain CS132) (TIBV) UP000027361 1037660 None 6806 0 6808 Tilletiaria anomala UBC 951 UP000029576 1230730 None 2508 247 2755 Tissierellia bacterium S5-A11 UP000029539 1284708 None 1481 1 1482 Tissierellia bacterium S7-1-4 UP000005258 1110502 TISMK 5079 699 5783 Tistrella mobilis (strain KA081020-065) UP000000522 12243 TMV 3 0 3 Tobacco mosaic virus (strain vulgare) (TMV) (Tobacco mosaic virus (strain U1)) UP000000575 12055 TNVA 5 0 5 Tobacco necrosis virus (strain A) (TNV-A) UP000001669 652939 TRVPP 6 0 6 Tobacco rattle virus (isolate PpK20) (TRV) UP000007795 12318 TOBSV 5 0 5 Tobacco streak virus (strain WC) (TSV) UP000011265 1289468 TVCVL 4 0 4 Tobacco vein clearing virus (isolate Nicotiana edwardsonii/United States/Lockhart/2000) (TVCV) UP000014074 1286976 TOGMI 8832 1 8834 Togninia minima (strain UCR-PA7) (Esca disease fungus) (Phaeoacremonium aleophilum) UP000009073 595494 TOLAT 3096 30 3130 Tolumonas auensis (strain DSM 9187 / TA4) UP000036947 1163406 None 9153 150 9307 Tolypocladium ophioglossoides CBS 100239 UP000029738 1479485 None 7660 95 7776 Tolypothrix bouteillei VB521301 UP000031981 1245935 None 7668 146 7886 Tolypothrix campylonemoides VB511288 UP000032761 1188 None 9873 73 9972 Tolypothrix sp. PCC 7601 UP000001666 12147 TBSVC 4 0 4 Tomato bushy stunt virus (strain Cherry) (TBSV) UP000007068 49267 TPCTV 6 0 9 Tomato pseudo-curly top virus (TPCTV) UP000000410 12281 TORVR 4 0 4 Tomato ringspot virus (isolate raspberry) (ToRSV) UP000006674 36413 TSWV1 5 0 5 Tomato spotted wilt virus (strain Brazilian Br-01) (TSWV) UP000000825 686948 TOTV 3 0 3 Tomato torrado virus (isolate Solanum lycopersicum/Spain/PRIToTV0301/-) (ToTV) UP000007547 66366 TYLCI 6 0 9 Tomato yellow leaf curl virus (strain Israel) (TYLCV) UP000001295 766189 TTVT1 3 0 3 Torque teno canis virus (isolate Cf-TTV10) UP000007080 766187 TTVZ1 3 0 3 Torque teno douroucouli virus (isolate At-TTV3) UP000008781 766188 TTVF1 3 0 3 Torque teno felis virus (isolate Fc-TTV4) UP000007078 766184 TTVG1 2 2 4 Torque teno midi virus 1 (isolate MD1-073) UP000008779 766183 TTVB1 3 0 3 Torque teno mini virus 1 (isolate TLMV-CBD279) UP000007079 766190 TTVI1 3 0 3 Torque teno sus virus 1 (isolate Sd-TTV31) UP000011264 1239832 TTVK2 4 0 4 Torque teno sus virus k2 (isolate Pig/New Zealand/38E05/2007) (TTSuVk2) UP000008780 766186 TTVE1 4 0 4 Torque teno tamarin virus (isolate So-TTV2) UP000006636 766185 TTVD1 3 0 3 Torque teno tupaia virus (isolate Tbc-TTV14) UP000008778 766182 TTVA1 2 0 2 Torque teno virus 1 (isolate TA278) UP000011277 1218490 ZCTTV 3 0 3 Torque teno zalophus virus 1 (ZcTTV) UP000039046 1531966 None 10771 695 11468 Torrubiella hemipterigena UP000005627 1076872 TORDC 4966 0 4972 Torulaspora delbrueckii (strain ATCC 10662 / CBS 1146 / NBRC 0425 / NCYC 2629 / NRRL Y-866) (Yeast) (Candida colliculosa) UP000031036 6265 TOXCA 15615 2884 18596 Toxocara canis (Canine roundworm) UP000002226 432359 TOXGV 8404 0 9370 Toxoplasma gondii (strain ATCC 50861 / VEG) UP000037393 379893 None 4263 24 4288 Trabulsiella odontotermitis UP000011185 72359 TRAHO 3212 0 3212 Trachipleistophora hominis (Microsporidian parasite) UP000009222 545695 TREAZ 3447 10 3474 Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) UP000006546 906968 TREBD 2507 15 2531 Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) UP000000503 744872 TRECH 2730 24 2789 Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta caldaria) UP000008212 243275 TREDE 2752 1 2767 Treponema denticola (strain ATCC 35405 / CIP 103919 / DSM 14222) UP000016649 1321815 None 2166 9 2175 Treponema lecithinolyticum ATCC 700332 UP000014541 1125699 None 2274 13 2287 Treponema maltophilum ATCC 51939 UP000000811 243276 TREPA 1028 0 1394 Treponema pallidum (strain Nichols) UP000015620 1291379 None 2767 8 2778 Treponema pedis str. T A4 UP000004157 754027 None 3123 23 3146 Treponema phagedenis F0421 UP000009223 545694 TREPZ 3497 15 3522 Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) UP000003571 907348 None 2817 11 2838 Treponema saccharophilum DSM 2985 UP000016412 1125725 None 2619 5 2626 Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 UP000002967 1124982 None 2564 6 2570 Treponema sp. JC4 UP000030314 1539298 None 2215 3 2236 Treponema sp. OMZ 838 UP000006852 869209 TRES6 2554 7 2608 Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091) UP000007266 7070 TRICA 16490 12 16542 Tribolium castaneum (Red flour beetle) UP000052099 291589 None 7 0 7 Trichechus manatus papillomavirus 1 UP000006823 6334 TRISP 15492 549 16355 Trichinella spiralis (Trichina worm) UP000034112 5544 TRIHA 11494 3 11498 Trichoderma harzianum (Hypocrea lixii) UP000008878 203124 TRIEI 4320 22 4451 Trichodesmium erythraeum (strain IMS101) UP000001542 5722 TRIVA 50188 2 59680 Trichomonas vaginalis UP000011272 674953 TTV1 2 0 2 Trichomonas vaginalis virus 1 (TVV1) UP000009169 559882 TRIEC 8676 0 8676 Trichophyton equinum (strain ATCC MYA-4606 / CBS 127.97) (Horse ringworm fungus) UP000008864 559305 TRIRC 8616 1389 10005 Trichophyton rubrum (strain ATCC MYA-4607 / CBS 118892) (Athlete's foot fungus) UP000009022 10228 TRIAD 11518 2 11537 Trichoplax adhaerens (Trichoplax reptans) UP000006757 1220162 TRIAC 8515 0 8528 Trichosporon asahii var. asahii (strain CBS 8904) (Yeast) UP000046395 70415 TRIMR 10588 10 10598 Trichuris muris (Mouse whipworm) UP000030758 68888 None 13949 10 21002 Trichuris suis (pig whipworm) UP000030665 36087 TRITR 9612 13 9650 Trichuris trichiura (Whipworm) (Trichocephalus trichiurus) UP000019116 4565 WHEAT 94922 130 99983 Triticum aestivum (Wheat) UP000015106 4572 TRIUA 33292 21 33484 Triticum urartu (Red wild einkorn) (Crithodium urartu) UP000002200 203267 TROWT 804 1 808 Tropheryma whipplei (strain Twist) (Whipple's bacillus) UP000052022 928856 None 3868 1 3872 Tropicibacter multivorans UP000000379 649638 TRURR 2903 21 2945 Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) UP000019771 1661 None 1966 18 1984 Trueperella pyogenes UP000008524 185431 TRYB2 8560 27 8790 Trypanosoma brucei brucei (strain 927/4 GUTat10.1) UP000000702 1068625 TRYCI 5906 0 6096 Trypanosoma congolense (strain IL3000) UP000008313 5693 TRYCR 10806 0 10844 Trypanosoma cruzi UP000002296 353153 TRYCC 19234 9 19608 Trypanosoma cruzi (strain CL Brener) UP000017861 1416333 None 11345 1 11348 Trypanosoma cruzi Dm28c UP000007350 85056 None 10051 1 10103 Trypanosoma cruzi marinkellei UP000031737 429131 None 7365 0 7475 Trypanosoma rangeli SC58 UP000009027 1055687 TRYVY 3778 0 3804 Trypanosoma vivax (strain Y486) UP000001213 521096 TSUPD 4147 23 4242 Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum) UP000006911 656061 TUBMM 7494 0 7496 Tuber melanosporum (strain Mel28) (Perigord black truffle) UP000027931 1157490 None 4416 36 4452 Tumebacillus flagellatus UP000011518 246437 TUPCH 20808 16 20858 Tupaia chinensis (Chinese tree shrew) UP000029771 1560034 TUPVT 7 0 7 Tupaia virus (isolate Tupaia/Thailand/-/1986) (TUPV) UP000006078 883169 None 1839 7 3014 Turicella otitidis ATCC 51513 UP000002938 702450 None 2723 56 2781 Turicibacter sanguinis PC909 UP000000676 364370 TASV1 3 0 3 Turkey astrovirus 1 (TAstV-1) UP000006048 869212 TURPD 4075 17 4139 Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) (Leptospira parva) UP000029775 1559365 TCTVB 6 0 6 Turnip curly top virus (isolate Turnip/South Africa/B11/2006) UP000000401 12154 TYMV 3 0 3 Turnip yellow mosaic virus UP000052102 936059 None 7 0 7 Tursiops truncatus papillomavirus 1 UP000002058 336963 UNCRE 7760 0 7760 Uncinocarpus reesii (strain UAMH 1704) UP000030854 52586 UNCNE 6482 0 6484 Uncinula necator (Grape powdery mildew) UP000001691 471821 UNCTG 761 6 776 Uncultured termite group 1 bacterium phylotype Rs-D17 UP000032261 42094 None 624 1 641 Ureaplasma diversum UP000000423 273119 UREPA 609 2 611 Ureaplasma parvum serovar 3 (strain ATCC 700970) UP000052096 461322 None 5 0 5 Ursus maritimus papillomavirus 1 UP000027002 1159556 None 8421 0 10261 Ustilaginoidea virens UP000006174 1128400 USTH4 7109 2 7111 Ustilago hordei (strain Uh4875-4) (Barley covered smut fungus) UP000000561 237631 USTMA 6788 18 6813 Ustilago maydis (strain 521 / FGSC 9021) (Corn smut fungus) UP000008595 487099 UUKS 4 0 4 Uukuniemi virus (strain S23) (Uuk) UP000000344 10254 VACCW 217 2 231 Vaccinia virus (strain Western Reserve) (VACV) (Vaccinia virus (strain WR)) UP000018126 1408226 None 1713 23 1736 Vagococcus lutrae LBD1 UP000000267 436907 VANPO 5313 40 5375 Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) (Kluyveromyces polysporus) UP000018843 1403948 None 1994 9 2025 Varibaculum cambriense DORA_20 UP000002602 10338 VZVD 69 1 73 Varicella-zoster virus (strain Dumas) (HHV-3) (Human herpesvirus 3) UP000002060 587200 VAR67 189 10 307 Variola virus (isolate Human/India/Ind3/1967) (VARV) (Smallpox virus) UP000000453 543728 VARPS 6232 40 6279 Variovorax paradoxus (strain S110) UP000011081 948595 VAVCU 2768 0 2773 Vavraia culicis (isolate floridensis) (Microsporidian parasite) UP000029628 1401067 None 1510 3 1513 Veillonella montpellierensis DNF00314 UP000007968 479436 VEIPT 1837 6 1844 Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) (Veillonella alcalescens) UP000018347 1262980 None 2763 14 2777 Veillonella sp. CAG:933 UP000050220 1403932 None 3424 31 3467 Veillonella sp. DORA_A_3_16_22 UP000010295 944564 None 1583 2 1588 Veillonella sp. oral taxon 780 str. F0422 UP000000374 391735 VEREI 4897 14 4947 Verminephrobacter eiseniae (strain EF01-2) UP000033046 1637999 None 2605 17 2640 Verrucomicrobia bacterium IMCC26134 UP000035268 1609981 None 2369 4 2420 Verrucomicrobia bacterium L21-Fru-AB UP000051220 1655635 None 1289 3 1295 Verrucomicrobia subdivision 6 bacterium BACL9 MAG-120924-bin69 UP000003839 382464 None 4870 13 4907 Verrucomicrobiae bacterium DG1235 UP000008308 263358 VERMA 5943 55 6009 Verrucosispora maris (strain AB-18-032) UP000008698 526221 VERA1 10233 0 10237 Verticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) (Verticillium wilt of alfalfa) (Verticillium albo-atrum) UP000001611 498257 VERDV 10530 0 10535 Verticillium dahliae (strain VdLs.17 / ATCC MYA-4575 / FGSC 10137) (Verticillium wilt) UP000044602 100787 None 20552 28 24474 Verticillium longisporum UP000007661 85617 VESVA 3 0 3 Vesicular exanthema of swine virus serotype A48 (isolate Swine/United States/A48/1948) (VESV) UP000002327 11285 VSIVA 6 3 9 Vesicular stomatitis Indiana virus (strain San Juan) (VSIV) UP000006800 882102 VIBA7 3696 26 3779 Vibrio anguillarum (strain ATCC 68554 / 775) (Listonella anguillarum) UP000016567 1219077 None 4021 126 4158 Vibrio azureus NBRC 104587 UP000002943 796620 None 3984 39 4023 Vibrio caribbeanicus ATCC BAA-2122 UP000000584 243277 VIBCH 3780 4 3832 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) UP000029660 190893 None 4866 42 6042 Vibrio coralliilyticus UP000016562 1219080 None 3121 89 3211 Vibrio ezurae NBRC 102218 UP000000537 312309 VIBF1 3806 7 3816 Vibrio fischeri (strain ATCC 700601 / ES114) UP000007456 903510 VIBFN 4391 49 4455 Vibrio furnissii (strain DSM 14383 / NCTC 11218) UP000033673 579748 None 3572 32 3604 Vibrio galatheae UP000029224 990268 None 6766 27 6916 Vibrio maritimus UP000005604 675813 None 3013 21 3057 Vibrio metschnikovii CIP 69.14 UP000031977 50718 None 3504 37 3541 Vibrio mytili UP000016895 28173 None 5363 177 5574 Vibrio nigripulchritudo UP000002493 223926 VIBPA 4807 14 4832 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) UP000001785 1283340 BPKVM 380 0 380 Vibrio phage KVP40 (isolate Vibrio parahaemolyticus/Japan/Matsuzaki/1991) (KVP40) (Bacteriophage KVP40) UP000029122 265668 None 5639 14 5654 Vibrio ponticus UP000016570 1219065 None 4183 164 4350 Vibrio proteolyticus NBRC 13287 UP000003769 391591 None 5204 96 5360 Vibrio shilonii AK1 UP000003627 701176 VIBSN 3997 31 4031 Vibrio sp. (strain N418) UP000005159 314289 None 3808 118 3935 Vibrio sp. AND4 UP000029225 1001886 None 7437 21 7459 Vibrio sp. C7 UP000031671 1481914 None 5853 14 5870 Vibrio sp. JCM 19231 UP000031670 1481922 None 6293 17 6311 Vibrio sp. JCM 19232 UP000031680 1481926 None 6618 12 6631 Vibrio sp. JCM 19236 UP000031666 1481919 None 6130 21 6153 Vibrio sp. JCM 19241 UP000009100 575788 VIBTL 4383 37 4431 Vibrio tasmaniensis (strain LGP32) (Vibrio splendidus (strain Mel32)) UP000029223 990271 None 7917 24 7949 Vibrio variabilis UP000002675 196600 VIBVY 4981 9 5028 Vibrio vulnificus (strain YJ016) UP000037421 170661 None 7091 232 7324 Vibrio xuii UP000036780 1473 VIRPA 3885 38 3934 Virgibacillus pantothenticus UP000050957 480284 None 4215 38 4253 Virgibacillus soli UP000027985 403957 None 3785 30 3826 Virgibacillus sp. SK37 UP000028875 1462526 None 4388 1 4394 Virgibacillus sp. Vm-5 UP000019062 1227360 None 4250 46 4297 Viridibacillus arenosi FSL R5-213 UP000009183 29760 VITVI 29859 48 29992 Vitis vinifera (Grape) UP000041254 1169540 None 23029 1 23034 Vitrella brassicaformis CCMP3155 UP000011082 993615 VITCO 2236 0 2239 Vittaforma corneae (strain ATCC 50505) (Microsporidian parasite) (Nosema corneum) UP000001058 3068 None 14331 4 14436 Volvox carteri f. nagariensis UP000006681 572478 VULDI 2485 8 2493 Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) UP000001505 716544 WADCW 1916 3 1956 Waddlia chondrophila (strain ATCC VR-1470 / WSU 86-1044) UP000014064 1299270 WALI9 4836 0 4865 Wallemia ichthyophaga (strain EXF-994 / CBS 113033) UP000005242 671144 WALMC 5251 11 5277 Wallemia mellicola (strain ATCC MYA-4683 / CBS 633.66) (Wallemia sebi (CBS 633.66)) UP000007081 39720 WDSV 6 0 6 Walleye dermal sarcoma virus (WDSV) UP000008641 865938 WEEVC 2042 3 2049 Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) UP000029079 759620 None 1337 1 2485 Weissella ceti UP000032287 137591 None 2272 10 2719 Weissella cibaria UP000051296 1123500 None 1294 10 1304 Weissella halotolerans DSM 20190 UP000051655 1616 None 1216 6 1222 Weissella kandleri UP000008930 1045854 WEIKK 1338 8 1357 Weissella koreensis (strain KACC 15510) UP000030643 1329250 None 2153 64 2228 Weissella oryzae SG25 UP000004528 585506 None 1896 56 1952 Weissella paramesenteroides ATCC 33313 UP000051992 1629 WEIVI 1449 13 1462 Weissella viridescens (Lactobacillus viridescens) UP000035100 1123501 None 4009 21 4041 Wenxinia marina DSM 24838 UP000000680 766180 WBV24 5 0 5 White bream virus (isolate Blicca bjoerkna L./Germany/DF24/00) (WBV) UP000001672 654934 WCCVB 2 0 2 White clover cryptic virus 1 (isolate Boccardo/2004) (WCCV-1) UP000000327 654913 WSSVS 524 0 524 White spot syndrome virus (isolate Shrimp/China/Tongan/1996) (WSSV) (White spot bacilliform virus) UP000009328 1206466 WICCF 6696 2 6702 Wickerhamomyces ciferrii (strain F-60-10 / ATCC 14091 / CBS 111 / JCM 3599 / NBRC 0793 / NRRL Y-1031) (Yeast) (Pichia ciferrii) UP000000562 36870 WIGBR 617 0 617 Wigglesworthia glossinidia brevipalpis UP000018666 1313067 None 4889 37 4930 Williamsia sp. D3 UP000051980 1736349 None 4032 31 4064 Williamsia sp. Leaf354 UP000014962 641526 None 4010 13 4024 Winogradskyella psychrotolerans RS-3 UP000031636 754409 None 3510 10 3527 Winogradskyella sp. PG-2 UP000011617 1261130 None 2000 4 2006 Wohlfahrtiimonas chitiniclastica SH04 UP000007516 100901 None 645 2 647 Wolbachia endosymbiont of Onchocerca ochengi UP000000422 273121 WOLSU 1965 63 2045 Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) (Vibrio succinogenes) UP000004810 6293 WUCBA 19276 22 19323 Wuchereria bancrofti UP000002417 78245 XANP2 4941 30 5035 Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) UP000001890 380358 XANAP 3143 47 3206 Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) UP000001010 190485 XANCP 3838 289 4178 Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) UP000006735 291331 XANOR 3885 497 4540 Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85) UP000001774 232237 None 60 0 60 Xanthomonas phage Xp10 UP000011203 102125 None 5293 54 5372 Xenococcus sp. PCC 7305 UP000008143 8364 XENTR 18252 5346 23684 Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) UP000002045 406818 XENBS 4049 53 4317 Xenorhabdus bovienii (strain SS-2004) UP000019197 1427517 None 4271 104 4375 Xenorhabdus cabanillasii JM26 UP000032721 351671 None 3690 59 3849 Xenorhabdus doucetiae UP000008075 406817 XENNA 4396 43 4546 Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6) UP000019202 1427518 None 4468 97 4566 Xenorhabdus szentirmaii DSM 16338 UP000002240 373193 XMRV6 3 0 3 Xenotropic MuLV-related virus (isolate VP62) (XMRV) UP000002852 8083 XIPMA 20359 92 20456 Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus) UP000002255 446471 XYLCX 3413 28 3443 Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) UP000000812 160492 XYLFA 2772 0 2827 Xylella fastidiosa (strain 9a5c) UP000051325 1735686 None 3778 14 3792 Xylophilus sp. Leaf220 UP000008596 928314 YMTV5 140 0 140 Yaba monkey tumor virus (strain VR587) (YMTV) UP000001300 284591 YARLI 6448 5 6476 Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica) UP000000360 11090 YEFV1 1 0 1 Yellow fever virus (strain 17D vaccine) (YFV) UP000019587 1443113 None 4754 519 5498 Yersinia enterocolitica LC20 UP000040578 685706 None 3622 1 3624 Yersinia nurmii UP000000815 632 YERPE 3810 99 5372 Yersinia pestis UP000002412 349747 YERP3 4298 7 4324 Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) UP000051768 1736516 None 2380 9 2389 Yonghaparkia sp. Root332 UP000017747 994573 None 3693 43 3736 Youngiibacter fragilis 232.1 UP000007209 128952 EBOZM 9 0 9 Zaire ebolavirus (strain Mayinga-76) (ZEBOV) (Zaire Ebola virus) UP000052089 998829 None 7 0 7 Zalophus californianus papillomavirus 1 UP000007305 4577 MAIZE 39054 19384 59329 Zea mays (Maize) UP000018850 1286632 None 3350 12 3369 Zhouia amylolytica AD3 UP000001303 871271 ZINIC 206 0 206 Zinderia insecticola (strain CARI) UP000008898 63186 ZOBGA 4666 42 4716 Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) UP000027135 136037 ZOONE 14534 5 14610 Zootermopsis nevadensis (Dampwood termite) UP000036987 29655 ZOSMR 20341 218 20637 Zostera marina (Eelgrass) UP000001654 655815 ZUNPS 4616 17 4653 Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) UP000019375 1333698 ZYGB2 863 3859 4723 Zygosaccharomyces bailii (strain CLIB 213 / ATCC 58445 / CBS 680 / CCRC 21525 / NBRC 1098 / NCYC 1416 / NRRL Y-2227) UP000008536 559307 ZYGRC 4987 0 4991 Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229) (Candida mogii) UP000001173 264203 ZYMMO 1776 3 1781 Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) UP000033647 1047168 None 10565 1 10566 Zymoseptoria brevis UP000008062 336722 ZYMTI 10972 0 10985 Zymoseptoria tritici (strain CBS 115943 / IPO323) (Speckled leaf blotch fungus) (Septoria tritici) UP000036270 67855 None 2183 7 2196 [Actinobacillus] muris UP000004756 518636 None 6695 122 6818 [Clostridium asparagiforme] DSM 15981 UP000032431 29343 None 2000 7 2017 [Clostridium] cellulosi UP000008797 717608 None 3058 15 3073 [Clostridium] cf. saccharolyticum K10 UP000003178 500633 None 2227 44 2271 [Clostridium] hiranonis DSM 13275 UP000004893 553973 None 3860 111 3976 [Clostridium] hylemonae DSM 15053 UP000027946 1121324 None 2794 154 3092 [Clostridium] litorale DSM 5388 UP000003340 537013 None 3875 32 3907 [Clostridium] methylpentosum DSM 5476 UP000015748 1292036 None 5943 13 5957 [Clostridium] sordellii ATCC 9714 UP000004910 428126 None 2319 39 2464 [Clostridium] spiroforme DSM 1552 UP000019109 1294263 None 4368 15 4383 [Clostridium] straminisolvens JCM 21531 UP000002970 742740 None 4626 42 4684 [Clostridium] symbiosum WAL-14163 UP000014155 1195236 None 5256 46 5302 [Clostridium] termitidis CT1112 UP000011752 1288971 None 5106 587 5711 [Clostridium] ultunense Esp UP000005753 633697 None 2693 23 2749 [Eubacterium] cellulosolvens 6 UP000008803 657319 None 2341 6 2347 [Eubacterium] siraeum 70/3 UP000004532 272129 None 5770 52 5824 [Oscillatoria] sp. PCC 6506 UP000035352 413882 None 5183 358 5557 [Polyangium] brachysporum UP000006343 913338 None 1235 7 1244 actinobacterium SCGC AAA027-L06 UP000029252 1504318 None 959 6 965 actinobacterium acAMD-2 UP000029322 1504319 None 1245 14 1259 actinobacterium acAMD-5 UP000029305 1504320 None 2526 357 2884 actinobacterium acAcidi UP000029266 1504321 None 523 28 551 actinobacterium acIB-AMD-6 UP000029310 1504322 None 963 41 1004 actinobacterium acIB-AMD-7 UP000029316 1504316 None 866 7 873 actinobacterium acMicro-1 UP000029304 1504317 None 1110 4 1114 actinobacterium acMicro-4 UP000037884 1523418 None 4551 25 4576 alpha proteobacterium AAP38 UP000037971 1523432 None 3040 15 3055 alpha proteobacterium AAP81b UP000003417 331869 None 5811 70 6128 alpha proteobacterium BAL199 UP000033990 684719 None 1320 1 1321 alpha proteobacterium HIMB114 UP000006097 744985 None 1490 3 1493 alpha proteobacterium HIMB59 UP000004836 1220535 None 1886 4 1890 alpha proteobacterium IMCC14465 UP000011717 1234595 None 3043 13 3058 alpha proteobacterium JLT2015 UP000027360 1492281 None 2613 174 2788 alpha proteobacterium Q-1 UP000029324 1502488 None 393 0 393 alpha proteobacterium QL1 UP000031777 1579370 None 1335 4 1339 archaeon GW2011_AR10 UP000031776 1579373 None 1305 3 1308 archaeon GW2011_AR15 UP000031765 1579378 None 1008 2 1010 archaeon GW2011_AR20 UP000037152 1628855 None 4630 19 4650 bacteria symbiont BFo1 of Frankliniella occidentalis UP000036794 1628856 None 2890 19 2910 bacteria symbiont BFo2 of Frankliniella occidentalis UP000037950 1664068 None 4009 15 4027 bacterium 336/3 UP000051588 1703762 None 2290 5 2295 bacterium SM23_31 UP000051603 1703763 None 1849 11 1860 bacterium SM23_57 UP000030700 1499966 None 5917 43 5963 bacterium UASB14 UP000030661 1499967 None 7000 48 7048 bacterium UASB270 UP000037849 1523424 None 3909 21 3930 beta proteobacterium AAP65 UP000037960 1523428 None 3155 4 3160 beta proteobacterium AAP99 UP000004188 314607 None 1316 1 1318 beta proteobacterium KB13 UP000008959 245012 None 1678 6 1684 butyrate-producing bacterium SM4/1 UP000008961 245014 None 2977 16 2993 butyrate-producing bacterium SS3/4 UP000051549 1703761 None 2056 6 2062 candidate division BRC1 bacterium SM23_51 UP000034875 1618341 None 695 3 698 candidate division CPR1 bacterium GW2011_GWA2_42_17 UP000034119 1618342 None 605 1 606 candidate division CPR1 bacterium GW2011_GWC1_49_13 UP000033869 1618344 None 1112 4 1116 candidate division CPR2 bacterium GW2011_GWC1_41_48 UP000034207 1618345 None 1122 1 1124 candidate division CPR2 bacterium GW2011_GWC2_39_10 UP000034581 1618350 None 1056 6 1062 candidate division CPR3 bacterium GW2011_GWF2_35_18 UP000052020 1704032 None 986 4 990 candidate division KD3-62 bacterium DG_56 UP000034752 1620410 None 333 2 335 candidate division Kazan bacterium GW2011_GWA1_44_22 UP000033958 1620411 None 196 0 196 candidate division Kazan bacterium GW2011_GWB1_45_10 UP000034913 1620414 None 719 4 723 candidate division Kazan bacterium GW2011_GWB1_52_7 UP000051123 1640516 None 2743 70 2837 candidate division NC10 bacterium CSP1-5 UP000052008 1703770 None 1726 3 1729 candidate division TA06 bacterium DG_24 UP000051124 1703771 None 1366 18 1384 candidate division TA06 bacterium DG_26 UP000051012 1703772 None 1771 4 1775 candidate division TA06 bacterium DG_78 UP000034219 1619072 None 1132 2 1134 candidate division TM6 bacterium GW2011_GWA2_36_9 UP000034748 1619075 None 853 1 854 candidate division TM6 bacterium GW2011_GWE2_41_16 UP000034453 1619076 None 937 2 939 candidate division TM6 bacterium GW2011_GWE2_42_60 UP000033842 1619077 None 950 3 953 candidate division TM6 bacterium GW2011_GWF2_28_16 UP000034862 1619078 None 930 2 932 candidate division TM6 bacterium GW2011_GWF2_30_66 UP000034766 1619079 None 879 2 881 candidate division TM6 bacterium GW2011_GWF2_32_72 UP000034634 1619080 None 1550 2 1552 candidate division TM6 bacterium GW2011_GWF2_33_332 UP000034938 1619082 None 573 7 580 candidate division TM6 bacterium GW2011_GWF2_36_6 UP000033926 1619083 None 1222 3 1225 candidate division TM6 bacterium GW2011_GWF2_37_49 UP000034625 1619084 None 908 3 911 candidate division TM6 bacterium GW2011_GWF2_38_10 UP000034620 1619085 None 387 0 387 candidate division TM6 bacterium GW2011_GWF2_43_17 UP000034056 1619086 None 908 2 910 candidate division TM6 bacterium GW2011_GWF2_43_87 UP000032214 1306947 None 859 1 860 candidate division TM6 bacterium JCVI TM6SC1 UP000030544 1511133 None 174 0 175 candidate division TM6 bacterium Zodletone_IIa UP000003056 443342 None 664 6 684 candidate division TM7 genomosp. GTL1 UP000051861 1703775 None 2701 99 2800 candidate division WOR_1 bacterium DG_54_3 UP000050975 1703778 None 1167 3 1170 candidate division WOR_3 bacterium SM1_77 UP000051373 1703779 None 2089 7 2097 candidate division WOR_3 bacterium SM23_42 UP000051096 1703780 None 2442 59 2502 candidate division WOR_3 bacterium SM23_60 UP000034852 1619087 None 740 3 743 candidate division WS6 bacterium GW2011_GWA2_37_6 UP000034302 1619089 None 663 3 666 candidate division WS6 bacterium GW2011_GWC1_33_20 UP000034140 1619090 None 734 3 737 candidate division WS6 bacterium GW2011_GWC1_36_11 UP000033866 1619093 None 603 3 606 candidate division WS6 bacterium GW2011_GWE1_34_7 UP000034816 1619097 None 380 0 380 candidate division WS6 bacterium GW2011_GWF1_35_23 UP000034799 1619100 None 882 1 883 candidate division WS6 bacterium GW2011_GWF2_39_15 UP000051297 1576480 None 604 18 622 candidate division WWE3 bacterium CSP1-7 UP000034128 1619110 None 365 1 366 candidate division WWE3 bacterium GW2011_GWA2_44_16 UP000033910 1619118 None 440 0 440 candidate division WWE3 bacterium GW2011_GWB2_43_22 UP000034507 1619119 None 966 2 968 candidate division WWE3 bacterium GW2011_GWC1_41_7 UP000034873 1619122 None 538 0 538 candidate division WWE3 bacterium GW2011_GWC1_47_10 UP000034504 1619125 None 752 4 756 candidate division WWE3 bacterium GW2011_GWC2_44_9 UP000018556 1394710 None 870 1 871 candidate division WWE3 bacterium RAAC2_WWE3_1 UP000051867 1703423 None 960 1 961 candidate division Zixibacteria bacterium DG_27 UP000015604 1379698 None 1894 12 1906 candidate division Zixibacteria bacterium RBG-1 UP000051351 1703424 None 1822 11 1833 candidate division Zixibacteria bacterium SM1_73 UP000050925 1703425 None 1209 26 1235 candidate division Zixibacteria bacterium SM23_73 UP000051418 1703426 None 1845 12 1857 candidate division Zixibacteria bacterium SM23_73_2 UP000051398 1703427 None 1487 7 1494 candidate division Zixibacteria bacterium SM23_73_3 UP000051415 1703428 None 2274 23 2298 candidate division Zixibacteria bacterium SM23_81 UP000051566 1655601 None 1646 13 1670 cyanobacterium BACL30 MAG-120619-bin27 UP000031625 1228987 None 1718 2 1720 cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake Yunoko UP000005853 262489 None 4596 204 5379 delta proteobacterium MLMS-1 UP000003834 88274 None 6554 133 7222 delta proteobacterium NaphS2 UP000028183 86106 None 1505 6 1519 endosymbiont of Acanthamoeba sp. UWC8 UP000027148 1415657 None 243 0 243 endosymbiont of Llaveia axin axin UP000005167 1049564 None 3221 9 3230 endosymbiont of Tevnia jerichonana (vent Tica) UP000015562 1248727 None 2218 10 2249 endosymbiont of unidentified scaly snail isolate Monju UP000003473 1168065 None 3774 20 3796 gamma proteobacterium BDW918 UP000003408 745014 None 2467 3 2470 gamma proteobacterium HIMB55 UP000005555 314287 None 2373 15 2388 gamma proteobacterium HTCC2207 UP000004692 391615 None 2447 2 2459 gamma proteobacterium HTCC5015 UP000002677 83406 None 3628 55 3763 gamma proteobacterium HdN1 UP000010300 937772 None 2833 11 2844 gamma proteobacterium IMCC1989 UP000004485 434085 None 2258 5 2263 gamma proteobacterium IMCC2047 UP000005615 876044 None 2847 8 2855 gamma proteobacterium IMCC3088 UP000006309 717931 None 97151 11380 108541 groundwater metagenome UP000036214 1008392 None 3750 23 3775 haloalkaliphilic bacterium ACht6-1 UP000010096 756883 None 3393 20 3476 halophilic archaeon DL31 UP000031399 1550399 None 1353 8 1361 marine actinobacterium MedAcidi-G1 UP000031257 1550400 None 1139 6 1146 marine actinobacterium MedAcidi-G2A UP000031352 1550401 None 1139 10 1149 marine actinobacterium MedAcidi-G2B UP000031370 1550402 None 1669 9 1678 marine actinobacterium MedAcidi-G3 UP000003868 312284 None 2652 16 2668 marine actinobacterium PHSC20C1 UP000004719 247639 None 3175 9 3185 marine gamma proteobacterium HTCC2080 UP000004931 247633 None 3639 22 3662 marine gamma proteobacterium HTCC2143 UP000002793 247634 None 3820 5 3827 marine gamma proteobacterium HTCC2148 UP000037599 1685135 None 1357 12 1369 miscellaneous Crenarchaeota group archaeon SMTZ-80 UP000037456 1685133 None 1119 3 1122 miscellaneous Crenarchaeota group archaeon SMTZ1-55 UP000037237 1685124 None 1097 19 1117 miscellaneous Crenarchaeota group-1 archaeon SG8-32-1 UP000037210 1685127 None 1294 20 1314 miscellaneous Crenarchaeota group-15 archaeon DG-45 UP000037259 1685126 None 1496 9 1505 miscellaneous Crenarchaeota group-6 archaeon AD8-1 UP000003936 1199245 None 918 0 918 secondary endosymbiont of Ctenarytaina eucalypti UP000003937 134287 None 576 0 576 secondary endosymbiont of Heteropsylla cubana UP000017917 1385624 None 3550 28 3579 uncultured Desulfofustis sp. PB-SRB1 UP000009383 655186 None 1275 8 1373 uncultured SUP05 cluster bacterium UP000017935 1385625 None 6175 25 6202 uncultured Thiohalocapsa sp. PB-PSB1 UP000041370 77133 None 1289 1 1290 uncultured bacterium UP000003659 50743 None 2903 23 2948 unidentified eubacterium SCB49 -------------------------------------------------------------------------------- DISCLAIMER -------------------------------------------------------------------------------- We make no warranties regarding the correctness of the data, and disclaim liability for damages resulting from its use. We cannot provide unrestricted permission regarding the use of the data, as some data may be covered by patents or other rights. Any medical or genetic information is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.