Porcine reproductive and respiratory syndrome virus (strain Lelystad) (PRRSV)
Average proteome isoelectric point is 7.93
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Virtual 2D-PAGE plot for 11 proteins (isoelectric point calculated using IPC_method)
Get csv file with sequences according given criteria:
* You can choose from 18 different methods for calculating isoelectric point
Protein with the lowest isoelectric point: >sp|Q04568|GP4_PRRSL Glycoprotein 4
MAAATLFFLAGAQHIMVSEAFACKPCFSTHLSDIETNTTAAAGFMVLQDINCFRPHGVSAAQEKISFGKSSQCREAVGTPQYITITANVTDESYLYNADLLMLSACLFYASEMSEKGFKVIFGNVSGVVSACVNFTDYVAHVTQHTQQHHLVIDHIRLLHFLTPSAMRWATTIACLFAILLAI
Molecular weight: 19.99 kDa
Isoelectric point according different methods: Bjellqvist 6.097 DTASelect 6.590 Dawson 6.109 EMBOSS 6.590 Grimsley 6.338 IPC_peptide 6.135
IPC_protein 5.779 Lehninger 6.109 Nozaki 6.402 Patrickios 0.973 ProMoST 6.186 Rodwell 6.109
Sillero 6.504 Solomon 6.109 Thurlkill 6.620 Toseland 6.198 Wikipedia 6.148 Avg_pI 6.252 Protein with the highest isoelectric point: >sp|Q04565|M_PRRSL Membrane protein
MGGLDDFCNDPIAAQKLVLAFSITYTPIMIYALKVSRGRLLGLLHILIFLNCSFTFGYMTYVHFQSTNRVALTLGAVVALLWGVYSFTESWKFITSRCRLCCLGRRYILAPAHHVESAAGLHSISASGNRAYAVRKPGLTSVNGTLVPGLRSLVLGGKRAVKRGVVNLVKYGR
Molecular weight: 18.93 kDa
Isoelectric point according different methods: Bjellqvist 10.189 DTASelect 10.160 Dawson 10.438 EMBOSS 10.613 Grimsley 10.526 IPC_peptide 10.467
IPC_protein 10.365 Lehninger 10.423 Nozaki 10.262 Patrickios 10.218 ProMoST 10.116 Rodwell 10.672
Sillero 10.365 Solomon 10.482 Thurlkill 10.277 Toseland 10.189 Wikipedia 10.657 Avg_pI 10.388
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
10
1
11
6,452
43
3,855
645.2
70.9 kDa
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
8.46
3.07
4.67
4.14
4.59
6.99
2.77
3.69
3.98
10.51
1.78
2.74
3.67
6.85
5.53
8.25
5.7
8.01
2.0
2.59
Note: For statistics only major isoforms were used (in this case 10 proteins)
For dipeptide frequency statistics click
here