Lassa virus (strain Mouse/Sierra Leone/Josiah/1976) (LASV)
Taxonomy: Viruses; ssRNA viruses; ssRNA negative-strand viruses; Arenaviridae; Mammarenavirus; Lassa mammarenavirus
Average proteome isoelectric point is 7.01
Get precalculated fractions of proteins
Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC_method)
Get csv file with sequences according given criteria:
* You can choose from 18 different methods for calculating isoelectric point
Protein with the lowest isoelectric point:
>sp|O09705|L_LASSJ RNA-directed RNA polymerase L
MEEDIACVKDLVSKYLVDNERLSRQKLAFLVQTEPRMLLMEGLKLLSLCIEVDSCNANGCEHNSEDKSVERILHDHGILTPSLCLWYPDGYKLTGNVLILLECFVRSSPANFEQKYIEDFKKLEQLKEDLKSVDINLIPLIDGRTSFYNEQIPDWVNDKLRDTLFSLLKYAQESNSLFEESEYSRLCESL
FMTSGRLSGVESLNVLMDNRSNHYEEVIASCHQGINNKLTAHEVKLQIEEEYQVFRNRLRKGEIEGQFLKVDKSQLLNELNNLYADKVVAEDNIEHLIYQFKRASPILRFLYANVDEGNEKRGNQTIGECQVQCWRSFLNKVKSLRILNTRRKLLLIFDALILLASKHDLMKQKCLKGWLGSCFLRVKDR
LVSLEATKRDLEKWGERGNRLRSRITQSSQCLSKNQILNSIFQKTILKATTALKDVGISVDHYKIDMEVICLNSYDLIMDFDVSGVVPTISYQRTEEETFPYVMGDVELLGTTDLERLSSLSLALVNSMKTSSTVKLRQNEFGPARYQVVRCKEAYCQEFSLGNTELQLIYQKTGECSKCYAINDNKVGE
VCSFYADPKRYFPAIFSAEVLQTTISTMISWIEDCNELEGQLNNIRSLTKMILVLILAHPSKRSQKLLQNLRYFVMAYLSDYHHKDLIDKIREELITDVEFLLYRLIRTLMNLVLSEDVKSMMTNRFKFILNVSYMCHFITKETPDRLTDQIKCFEKFLEPKVRFGHVSTNPADTATEEELDDMVYNAKK
FLSKDGCTTIEGPDYKRPGVSKKYLSLLTSSFNNGSLFKEREVKREIKDPLITSGSAALDLASKKSVVVNKYTDGSRILNYDFNKLTALAVSQLTEVFSRKGKYLLNKQDYEYKVQQAMSNLVLGSGQLKSDADGADLDEILLDGGASDYFDQLKETVEKIVDQYREPVKLGSGPNGDGQPSINDLDEIV
SNKFYIRLIKGELSNHMVEEFDHDILPGKFYEEFCNAVYENSRLKQKYFYCGHMSQCPIGELTKAVSTRTYFNHEYFQCFKSILLIMNANTLMGRYTHYKSRNLNFKFDMGKLSDDVRISERESNSEALSKALSLTNCTTAMLKNLCFYSQESPQSYDSVGPDTGRLKFSLSYKEQVGGNRELYIGDLRT
KMFTRLIEDYFEAISLQLSGSCLNNEKEFENAILSMKLNVSLAHVSYSMDHSKWGPMMCPFLFLTVLQNLIFLSKDLQADIKGRDYLSTLLMWHMHKMVEIPFNVVTAMMKSFIKAQLGLRKKTKQSITEDFFYSNFQAGVVPSHISSILDMGQGILHNTSDFYALISERFINYAISCICGGTIDAYTSS
DDQISLFDQSLTELLQRDPEEFRTLIEFHYYMSDQLNKFVSPKSVIGRFVAEFKSRFFVWGDEVPLLTKFVAAALHNIKCKEPHQLAETIDTIIDQSVANGVPVHLCNLIQKRTLNPLQYARYPIDPFLLNCETDVRDWVDGNRSYRIMRQIEGLIPNACSKIRSMLRKLYNRLKTGQLHEEFTTNYLSS
EHLSSLRNLCELLDVEPPSESDLEYSWLNLAAHHPLRMVLRQKIIYSGAVNLDDEKIPTIVKTIQNKLSSTFTRGAQKLLSEAINKSAFQSSIASGFVGLCRTLGSKCVRGPNKENLYIKSIQSLISDVKGIKLLTNSNGIQYWQVPLELRNGSGGESVVSYFRPLLWDYMCISLSTAIELGAWVLGEPK
TVKVFDFFKHNPCDYFPLKPTASKLLEDRVGLNHIIHSLRRLYPSVFEKHILPFMSDLASTKMKWSPRIKFLDLCVALDVNCEALSLVSHIVKWKREEHYIVLSSELRLSHSRTHEPMVEERVVSTSDAVDNFMRQIYFESYVRPFVATTRTLGSFTWFPHKTSVPEGEGLHRMGPFSSFVEKVIHKGVE
RPMFKHDLMMGYAWIDFDIEPARFNQNQLIASGLVDPKFDSLEDFFDAVASLPPGSAKLSQTVRFRVKSQDASFKESFAIHLEYTGSMNQQAKYLVHDVTVMYSGAVSPCVLSDCWRLVLSGPTFKGKSAWYVDTEIINEFLIDTNQLGHVTPVEIVVDMERLQFTEYDFVLVGPCTEPTPLVVHRGGLW
ECGKKLASFTPVIQDQDLEIFVREVGDTSSDLLIGALSDMMIDRLGLRMQWSGVDIVSTLRAAAPSCEGILSAVLEAVDNWVEFKGYALCYSKSRGKVMVQSSGGKLRLKGRTCEELTRKDECIEDIE
MEEDIACVKDLVSKYLVDNERLSRQKLAFLVQTEPRMLLMEGLKLLSLCIEVDSCNANGCEHNSEDKSVERILHDHGILTPSLCLWYPDGYKLTGNVLILLECFVRSSPANFEQKYIEDFKKLEQLKEDLKSVDINLIPLIDGRTSFYNEQIPDWVNDKLRDTLFSLLKYAQESNSLFEESEYSRLCESL
FMTSGRLSGVESLNVLMDNRSNHYEEVIASCHQGINNKLTAHEVKLQIEEEYQVFRNRLRKGEIEGQFLKVDKSQLLNELNNLYADKVVAEDNIEHLIYQFKRASPILRFLYANVDEGNEKRGNQTIGECQVQCWRSFLNKVKSLRILNTRRKLLLIFDALILLASKHDLMKQKCLKGWLGSCFLRVKDR
LVSLEATKRDLEKWGERGNRLRSRITQSSQCLSKNQILNSIFQKTILKATTALKDVGISVDHYKIDMEVICLNSYDLIMDFDVSGVVPTISYQRTEEETFPYVMGDVELLGTTDLERLSSLSLALVNSMKTSSTVKLRQNEFGPARYQVVRCKEAYCQEFSLGNTELQLIYQKTGECSKCYAINDNKVGE
VCSFYADPKRYFPAIFSAEVLQTTISTMISWIEDCNELEGQLNNIRSLTKMILVLILAHPSKRSQKLLQNLRYFVMAYLSDYHHKDLIDKIREELITDVEFLLYRLIRTLMNLVLSEDVKSMMTNRFKFILNVSYMCHFITKETPDRLTDQIKCFEKFLEPKVRFGHVSTNPADTATEEELDDMVYNAKK
FLSKDGCTTIEGPDYKRPGVSKKYLSLLTSSFNNGSLFKEREVKREIKDPLITSGSAALDLASKKSVVVNKYTDGSRILNYDFNKLTALAVSQLTEVFSRKGKYLLNKQDYEYKVQQAMSNLVLGSGQLKSDADGADLDEILLDGGASDYFDQLKETVEKIVDQYREPVKLGSGPNGDGQPSINDLDEIV
SNKFYIRLIKGELSNHMVEEFDHDILPGKFYEEFCNAVYENSRLKQKYFYCGHMSQCPIGELTKAVSTRTYFNHEYFQCFKSILLIMNANTLMGRYTHYKSRNLNFKFDMGKLSDDVRISERESNSEALSKALSLTNCTTAMLKNLCFYSQESPQSYDSVGPDTGRLKFSLSYKEQVGGNRELYIGDLRT
KMFTRLIEDYFEAISLQLSGSCLNNEKEFENAILSMKLNVSLAHVSYSMDHSKWGPMMCPFLFLTVLQNLIFLSKDLQADIKGRDYLSTLLMWHMHKMVEIPFNVVTAMMKSFIKAQLGLRKKTKQSITEDFFYSNFQAGVVPSHISSILDMGQGILHNTSDFYALISERFINYAISCICGGTIDAYTSS
DDQISLFDQSLTELLQRDPEEFRTLIEFHYYMSDQLNKFVSPKSVIGRFVAEFKSRFFVWGDEVPLLTKFVAAALHNIKCKEPHQLAETIDTIIDQSVANGVPVHLCNLIQKRTLNPLQYARYPIDPFLLNCETDVRDWVDGNRSYRIMRQIEGLIPNACSKIRSMLRKLYNRLKTGQLHEEFTTNYLSS
EHLSSLRNLCELLDVEPPSESDLEYSWLNLAAHHPLRMVLRQKIIYSGAVNLDDEKIPTIVKTIQNKLSSTFTRGAQKLLSEAINKSAFQSSIASGFVGLCRTLGSKCVRGPNKENLYIKSIQSLISDVKGIKLLTNSNGIQYWQVPLELRNGSGGESVVSYFRPLLWDYMCISLSTAIELGAWVLGEPK
TVKVFDFFKHNPCDYFPLKPTASKLLEDRVGLNHIIHSLRRLYPSVFEKHILPFMSDLASTKMKWSPRIKFLDLCVALDVNCEALSLVSHIVKWKREEHYIVLSSELRLSHSRTHEPMVEERVVSTSDAVDNFMRQIYFESYVRPFVATTRTLGSFTWFPHKTSVPEGEGLHRMGPFSSFVEKVIHKGVE
RPMFKHDLMMGYAWIDFDIEPARFNQNQLIASGLVDPKFDSLEDFFDAVASLPPGSAKLSQTVRFRVKSQDASFKESFAIHLEYTGSMNQQAKYLVHDVTVMYSGAVSPCVLSDCWRLVLSGPTFKGKSAWYVDTEIINEFLIDTNQLGHVTPVEIVVDMERLQFTEYDFVLVGPCTEPTPLVVHRGGLW
ECGKKLASFTPVIQDQDLEIFVREVGDTSSDLLIGALSDMMIDRLGLRMQWSGVDIVSTLRAAAPSCEGILSAVLEAVDNWVEFKGYALCYSKSRGKVMVQSSGGKLRLKGRTCEELTRKDECIEDIE
Molecular weight: 253.43 kDa
Isoelectric point according different methods:
Isoelectric point according different methods:
Protein with the highest isoelectric point:
>sp|O73557|Z_LASSJ RING finger protein Z
MGNKQAKAPESKDSPRASLIPDATHLGPQFCKSCWFENKGLVECNNHYLCLNCLTLLLSVSNRCPICKMPLPTKLRPSAAPTAPPTGAADSIRPPPYSP
MGNKQAKAPESKDSPRASLIPDATHLGPQFCKSCWFENKGLVECNNHYLCLNCLTLLLSVSNRCPICKMPLPTKLRPSAAPTAPPTGAADSIRPPPYSP
Molecular weight: 10.68 kDa
Isoelectric point according different methods:
Isoelectric point according different methods:
General Statistics
Number of major isoforms |
Number of additional isoforms |
Number of all proteins |
Number of amino acids |
Min. Seq. Length |
Max. Seq. Length |
Avg. Seq. Length |
Avg. Mol. Weight |
|---|---|---|---|---|---|---|---|
0 |
3,377 |
99 |
2,218 |
844.2 |
95.7 kDa |
Amino acid frequency
Ala |
Cys |
Asp |
Glu |
Phe |
Gly |
His |
Ile |
Lys |
Leu |
Met |
Asn |
Gln |
Pro |
Arg |
Ser |
Thr |
Val |
Trp |
Tyr |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
4.83 |
2.55 |
5.77 |
6.01 |
4.18 |
5.54 |
2.28 |
5.77 |
6.66 |
11.79 |
2.87 |
5.0 |
3.91 |
3.52 |
4.8 |
8.5 |
5.3 |
6.01 |
1.13 |
3.58 |
For dipeptide frequency statistics click here
See this proteome in:
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here
Reference: Kozlowski LP. Proteome-pI: proteome isoelectric point database. Nucleic Acids Res. 2016. doi: 10.1093/nar/gkw978  |
Contact: Lukasz P. Kozlowski |