Proteome-pI - Proteome Isoelectric Point Database statistics

Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146)

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Robiginitalea; Robiginitalea biformata

Average proteome isoelectric point is 6.36

Get precalculated fractions of proteins

Acidic

pI < 6.8

6.8-7.4

pI > 7.4

Basic

All

Virtual 2D-PAGE plot for 3,211 proteins (isoelectric point calculated using IPC_method)

Get csv file with sequences according given criteria:

* You can choose from 18 different methods for calculating isoelectric point

Protein with the lowest isoelectric point:

>tr|A4CQ80|A4CQ80_ROBBH Uncharacterized protein 

MITTKLFNEIPGTMKIFIVLAFLLLFTAAGYAQTTVNLADQCNCEVLSGTDVSAPGMTTPSGADTGDIYVNTNTGTIYFWDGDSWEHTSTDSNTTNTSVAVAGSDLVITDSDGNTVSVPLADIAAVTDTNTTNAAFGVIGTDLVITDSEGNTVSVPVADIAALTDTNTTNASLTEDGTNLTLTDSDGNTV
SILLADLAAVIDTNTTNALFEVVGTDLVITDSDGNTVSVPLADVAAVVDTDDQSAAEVSYDNTTSGLAGTNVQDALDEINAAAGNVSLTDNGDGTYDFTDAAGNVTTISDTSLSTLVDSGGGTYTYTDEAGNVQQIFTEAASNPYDNSGSGLAANNVQDALDEINAAAGNVSLTDNGDGTYDFTDAAGNV
TTISDTSLSTLVDNGDGSFTYTSEDGTVTTFTETTSSLADNGDGTFTYTDENGATTTFDAKIATVADNLDGTYTITDDFGTSVTIDTNNTVTTLVDNGDGSFTYTSEDGTVTTFTETTSTLVDNGGGTYTYTDENGNTQQIFTEAASNPYDNSGSGLAANNVQDAIDEINTLAGTVALADNGDGTYTFTD
ASGATTTISDTSISTLVDNGDATFTYTDETGTPVTINLISADANNDITAGSDGGLYLNVASVTVAETITNLSDNNDGTFTYVNENGVSQTVSKADVTDNGDGTYTFTNNDGSDVTINTNGIAISNTVAGNRIATVTDAGGSSTDIDETVTTLVDNANGSFTYTSEDGTATTFTETDDQTAAEVSYDNSTS
GLTAGDTQAAIDELAAGSTDDQNLTGASLTGNTLQIDIEDGSSASVDLSALVDDADADPTNELQTISRTGTDVTLSDGGGTVSVADNDNDSSNETNTAFAVNAGNLEITDAAGTLSVPVSSLGSDDQNLTLAGNSLSIEDGNSVDLSGYLDNTDDQNLTLAGNTLSIEDGNSVDLSGFVSTDDQNISGSG
LSGTDLTIGIENGTNEVIDLSSLVDDADADPTNEYNTGAAMNAGSLEVTDGGGTQSANLISADANNDIVAGSDGALYLNVASVTISETITNLSDNNDGTFTYVNENGVSQTVSKADVTDNGDGTYTFTNNDGSDVTINTNGIAISNTVAGNRIATVTDAGGSSTDIDETVTTLVDNANGSFTYTSEDGTA
TTFTETDDQTAAEVSYDNSTSGLTAGDTQAAIDELAAGSTDDQNLTGASLTGNTLQIDIEDGSSASVDLSALVDDADADPTNELQTISRTGTDVTLSDGGGTVSVADNDNDSSNETNTAFAVNAGNLEITDAAGTLSVPVSSLGSDDQNISGSGLSGTDLTIGIENGTNEVIDLSSLVDDADADPNNEIQ
DMSLAGNTLSLTGDATTVDLSGYLDNTDDQNLTLAGNTLSIEDGNSVDLSGFVSTDDQNLTGASLTGNTLQIDIEDGSSASVDLSALVDDADADPTNELQTISRTGTDVTLSDGGGTVSVADNDNDSSNETNTAFAVNAGNLEITDAAGTLSVPVSSLGSDDQNLTLAGNTLSIEDGNSVDLSGYVSTDD
QNLTGASLTGNTLQIDIEDGSSASVDLSALVDDADADPTNEYNTGAAMNAGSLEVTDGGGTQSANLISADANNDITAGSDGALYLNVASVTISETITNLSDNNDGTFTYVNENGVSQTVSKADVADNGDGTYTFTNNDGSDVTINTNGVAISNTLAGNRIATVTDAGGSSTDIDETVTTLVDNANGSFTY
TSEDGTATTFTETDDQTAAEVSYDNSTSGLTAGDTQAAIDELAAGSTDDQNLTGASLTGNTLQIDIEDGSSASVDLSALVDDADADPTNELQTISRTGTDVTLSDGGGTVSVADNDNDSSNETNTAFAVNAGNLEITDAAGTLSVPVSSLGSDDQNLTLAGNTLSIEDGNSVDLSGFVSTDDQNISGSGL
SGTDLTIGIENGTNEVIDLSSLVDDADADPTNELQTISRTGTDVTLSDGGGTVSVADNDNDSSNETNTAFAVNAGNLEITDAAGTLSVPVSSLGSDDQNISGSGLSGTDLTIGIENGTNEVIDLSSLVDDADADPNNEIQDMSLAGNTLSLTGDATTVDLSGYLDNTDDQNLTGASLTGNTLQIDIEDGS
SASVDLSALVDDADADPNNEIQDMSLAGNTLSLTGDATTVDLSGYLDNTDDQNLTLAGNTLSIEDGNSVDLSGFVSTDDQNISGSGLSGTDLTIGIENGTNEVIDLSSLVDDADADPTNELQTISRTGTDVTLSDGGGTVSVADNDNDSSNETNTAFAVNAGNLEITDAAGTLSVPVSSLGSDDQNISGS
GLSGTDLTIGIENGTNEVIDLSSLVDDADADPNNEIQDMSLAGNTLSLTGDATTVDLSGYLDNTDDQNLTLAGNTLSIEDGNSVDLSGFVSTDDQNISGSGLSGTDLTIGIENGTNEVIDLSSLVDDADADPTNELQTISRTGTDVTLSDGGGTVSVADNDNDSSNETNTAFAVNAGNLEITDAAGTLSV
PVSSLGSDDQNLTLAANSLSIEDGNSVDLSGYLDNTDDQNLTLAGNTLSIEDGNSVDLSGFVSTDDQNISGSGLSGTDLTIGIENGTNEVIDLSSLVDDADADPTNELQTISRTGTDVTLSDGGGTVSVADNDNDSSNETNTAFAVNAGNLEITDAAGTLSVPVSSLGSDDQNISGSGLSGTDLTIGIEN
GTNEVIDLSSLVDDADADPNNEIQDMSLAGNTLSLTGDATTVDLSGYLDNTDDQNLTLAGNTLSIEDGNSVDLSGYVSTDDQNLTGASLTGNTLQIDIEDGSSASVDLSALVDDADADPTNELQTISRTGTDVTLSDGGGTVSVADNDNDSSNETNTAFAVNAGNLEITDAAGTLSVPVSSLGSDDQNLT
LAVNSLSIEDGNSVDLSGYLDNTDDQNLTGASLTGNTLQIDIEDGSSASVDLSALVDDADADPNNEIQDMSLAGNTLSLTGDATTVDLSGYLDNTDDQNLTLAGNTLSIEDGNSVDLSGFVSTDDQNISGSGLSGTDLTIGIENGTNEVVDLSSLLDNTDDQYDDEVPLRTPIDVDEGGESSPTNETTVQ
EVINAIAPITSKAARIFYPPSIAIDASANGTGFTEDLYAQYVAQFGTPAVASAGAPAALPTYAANELYYYVTYADPTVFDNMSIDANGVLTYDIIGQPADYNALINVVFVVK

Molecular weight: 319.12 kDa
Isoelectric point according different methods:

Protein with the highest isoelectric point:

>tr|A4CNJ8|A4CNJ8_ROBBH 50S ribosomal protein L34 

MKRTFQPSKRKRKNKHGFRERMASANGRKVLARRRSKGRKKLSVSSEPRHKK

Molecular weight: 6.22 kDa
Isoelectric point according different methods:

General Statistics

Number of major isoforms	Number of additional isoforms	Number of all proteins	Number of amino acids	Min. Seq. Length	Max. Seq. Length	Avg. Seq. Length	Avg. Mol. Weight
3,194	17	3,211	1,071,108	20	4,484	335.4	37.4 kDa

Amino acid frequency

Ala	Cys	Asp	Glu	Phe	Gly	His	Ile	Lys	Leu	Met	Asn	Gln	Pro	Arg	Ser	Thr	Val	Trp	Tyr
8.18	0.75	5.9	6.88	4.65	7.94	1.91	6.02	4.71	9.94	2.28	4.21	3.54	4.5	5.9	5.93	5.33	6.47	1.23	3.75

Note: For statistics only major isoforms were used (in this case 3,194 proteins)
For dipeptide frequency statistics click here

See this proteome in:

Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI: proteome isoelectric point database. Nucleic Acids Res. 2016. doi: 10.1093/nar/gkw978

Contact: Lukasz P. Kozlowski