Tomato torrado virus (isolate Solanum lycopersicum/Spain/PRIToTV0301/-) (ToTV)
Average proteome isoelectric point is 6.12
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC_method)
Get csv file with sequences according given criteria:
* You can choose from 18 different methods for calculating isoelectric point
Protein with the lowest isoelectric point: >sp|A1XIQ0|ORF1_TOTV Uncharacterized protein ORF1
MSFISRLNTSLEEEAFHKQVADSQWVCSVDTGSGIINSDPTLDFKICPKTGGAISVLSVSWQNNSPQLVPGHYLLRSGTWPITGVKLSGLLVHRSIRLETTRKLLEAQRISVSQQASSSSAAGAAGKQPQVTLTQLQEELDEAKTRLALKEKELLEALSEISKLRLQLSNQLSNDDVFSGWTEEGPK
Molecular weight: 20.43 kDa
Isoelectric point according different methods: Bjellqvist 5.944 DTASelect 6.326 Dawson 5.931 EMBOSS 6.275 Grimsley 6.148 IPC_peptide 5.944
IPC_protein 5.741 Lehninger 5.919 Nozaki 6.160 Patrickios 4.736 ProMoST 6.033 Rodwell 5.906
Sillero 6.262 Solomon 5.931 Thurlkill 6.313 Toseland 6.033 Wikipedia 5.906 Avg_pI 6.048 Protein with the highest isoelectric point: >sp|A1XIQ1|POL2_TOTV RNA2 polyprotein
MMMSSVAGQRKGPSDKSAAVSEQLIAQITAAVEAGNKNLLRKLGMGSYGILYGAQEKKAMELFDPEDVHNITSLWSSFKKTFTSSRDHGNLFFHLYGVMFFMVPHVHGGEGSVKISLCSSNDPTNPVLQEKVLYFSGGAQAVLMSPTITLPFVKRGPMFYYTMECLGTRAQIPCSVVAIWKQKIDIRSAI YSKQETMSWAIEALHRPQFFQDRQEAAQYISSVYSNATSSATDSVLPFVGAQLGDTKMNVPSEARMIRSSSLRVPMLKVQSKRFSSMEIPSTSTAHLLGTTRDETVIQEESRYEEEGDDGVLFPVKKAQGLNYSHVWDNLGIESFVDVELPENWDELSVRQQVAAAMIAFANKGVCLVPKHIINRDKHNI HLENITEHNYLVILERYGIVNAGSLARTENWYNLTLAQRVEELIYQRDDAYFMFGDNTNPYPPFDCYDGLTLKVRSELERVAKEQARQRFYKEAARAQVKNKVAQTSVEEIPSTSFATKVAMESGSVDSMKIAIQAEAANEAVRPNEVMFEFGQEMNNEGATELELQQPACVASNSFFNVGVFEFAWKKS SSVAAEVLSLALPAALFGKSKEMSMGSQMLRYYDAALIMYKVILYISGMGAISGQLALVWDECNVLNRKKEFINIASLYASKHRLVSASEQSSGEFCFTPTGIGKFVPLDPASGAYDLGSIRVFVTHPLASATELESIPCHIHLQCKVLSTNIMQPPRLRAQAQFGMKPDQTHFPRFPTNQVLLHYNWGV AASMGTTLVSIFSPSGIYESDGTLQPSLLGNIARNCKWWTGTCVFEICIEKTQFHSGSLAIGLGTLNTSMSTPHDILNMPHVICNLEMGRKFYFRCTITNWNGKNLLTTGRKSSLPRPKHMSHMRLFATVLKPLVSTSIHLDTVGVTVQLKCIEDLVLGGTVSVKPIYGHWTKGKNAVDFLFSEMDLSQR KEIEKLRKENVETFDEKGKKQPQVQVPLRDKFSYGAVQYFVMNWKDEERLLVLPCAPWSVRFPQGALVQEAITCPFIDWCSSFCYWSGSLEYTIIVHRVQTSNNIGGVLNITLDSSGYPFPLGISKGTYVVSAGGGAKWAFTYGMSDNIFSFVVHDDEFFPRRHTKARAIDPNASRIMTLQDRLGNLIIN LPAKDVISSLEILVKPGPDFKLQLAQAPSANHEKHLGDMQTHTYLYTPDFSELRSFEN
Molecular weight: 133.71 kDa
Isoelectric point according different methods: Bjellqvist 6.898 DTASelect 7.293 Dawson 6.883 EMBOSS 7.293 Grimsley 6.766 IPC_peptide 6.898
IPC_protein 6.478 Lehninger 6.883 Nozaki 7.205 Patrickios 4.190 ProMoST 6.912 Rodwell 6.883
Sillero 7.293 Solomon 6.883 Thurlkill 7.322 Toseland 6.649 Wikipedia 6.883 Avg_pI 6.964
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
3
0
3
3,543
187
2,158
1181.0
131.7 kDa
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
7.79
2.06
4.97
5.39
5.22
6.07
2.43
5.48
5.5
9.17
2.74
4.04
4.29
4.52
4.35
8.33
5.5
7.42
1.41
3.3
Note: For statistics only major isoforms were used (in this case 3 proteins)
For dipeptide frequency statistics click
here